BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O05 (656 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10 SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) 29 3.3 SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_45827| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7 >SB_33495| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 609 Score = 64.1 bits (149), Expect = 1e-10 Identities = 25/47 (53%), Positives = 37/47 (78%) Frame = +3 Query: 513 TFRQGEDFXNRIAWYFKRQXFKSGEVIALFMETQPEYIFVWLGLAKM 653 TF++ ++F NRIA YFK Q + G+VIAL +E +PE+I +WLGL+K+ Sbjct: 111 TFKEADEFANRIANYFKSQGYAKGDVIALILENRPEFILIWLGLSKI 157 >SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) Length = 874 Score = 29.1 bits (62), Expect = 3.3 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +3 Query: 513 TFRQGEDFXNRIAWYFKRQXFKSGEVIALFMETQPEYIFVW 635 T+ + +D +++A R+ FK GEV+A+ PE+ + Sbjct: 45 TYPELKDLIHKMASALTRKGFKQGEVLAIMCPNIPEFAIAY 85 >SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 277 Score = 28.3 bits (60), Expect = 5.8 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%) Frame = +2 Query: 212 ILTSIALTTAGLGWLLRGSPTMMSAVATLGAYLLTGDRYQWI----YLWKKTHKRDFLXL 379 IL + A L++ P ++SA G + T Y + Y+ +KT K L L Sbjct: 169 ILVDLPTLEARKAMLMQNLPPVISASDGKGVEIRTEIDYDMLAKRFYMGRKTEKLKQLRL 228 Query: 380 RVLLATMFXIWRWEKQXQS 436 + L T +WR + + +S Sbjct: 229 WIQLDTYSTVWRKQTKQKS 247 >SB_45827| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2047 Score = 27.9 bits (59), Expect = 7.7 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +2 Query: 233 TTAGLGWLLRGSPTMMSAVATLGAYLLTGDRYQ 331 +T GLGW+L T AT +L+ G YQ Sbjct: 1380 STGGLGWILPPRDTAAPREATPDRFLVYGHNYQ 1412 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,447,812 Number of Sequences: 59808 Number of extensions: 341046 Number of successful extensions: 745 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 743 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1681430875 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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