BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_O05 (656 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 4.5 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 22 5.9 L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 21 7.8 AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.8 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 22.2 bits (45), Expect = 4.5 Identities = 15/63 (23%), Positives = 30/63 (47%) Frame = +2 Query: 320 DRYQWIYLWKKTHKRDFLXLRVLLATMFXIWRWEKQXQSVVSXWAEIAXLYPEXKAFIMG 499 D++ W+Y WK+ L ++A + + + K Q V++ W + Y + + MG Sbjct: 625 DQWNWVYEWKE------LIPSHIMAGLLDKFFFPKWLQ-VLALWLNHSPNYDQVTNWYMG 677 Query: 500 DRG 508 +G Sbjct: 678 WKG 680 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 21.8 bits (44), Expect = 5.9 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = -3 Query: 159 ILVLEILFDLVHIFYT 112 IL L +LF+ +HI Y+ Sbjct: 6 ILTLGVLFNTLHIIYS 21 >L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. Length = 382 Score = 21.4 bits (43), Expect = 7.8 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +2 Query: 152 TRMSXKRGVRFEEAERCKGII 214 T M K G+RFEE GI+ Sbjct: 51 TFMCHKYGLRFEEVSEKYGIL 71 >AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. Length = 898 Score = 21.4 bits (43), Expect = 7.8 Identities = 17/69 (24%), Positives = 29/69 (42%) Frame = -3 Query: 297 SVATALIMVGEPRRSHPSPAVVSAMDVRIIPLHRSASSNRTPLXSDILVLEILFDLVHIF 118 ++A + M PRR P A + LHR+A + + L L+ + D+ + Sbjct: 100 TIAVCVCMRKCPRRHRPVCASNGKIYANHCELHRAACHSGSSLTKSRLMRCLHHDIENAH 159 Query: 117 YTRIL*TNK 91 R L N+ Sbjct: 160 IRRTLHMNR 168 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 162,428 Number of Sequences: 438 Number of extensions: 2955 Number of successful extensions: 5 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 19734030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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