BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_O01
(593 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122185-1|AAM52697.1| 310|Drosophila melanogaster LD42289p pro... 66 3e-11
AE014134-1700|AAF52815.1| 304|Drosophila melanogaster CG4036-PA... 66 3e-11
BT021254-1|AAX33402.1| 115|Drosophila melanogaster RE59362p pro... 31 1.2
BT001425-1|AAN71180.1| 120|Drosophila melanogaster GH14831p pro... 31 1.2
AE014134-1699|AAF52814.2| 93|Drosophila melanogaster CG18854-P... 31 1.2
AE014134-1698|AAG22425.1| 93|Drosophila melanogaster CG18854-P... 31 1.2
AE014134-1697|AAN10708.1| 120|Drosophila melanogaster CG18854-P... 31 1.2
AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-P... 26 2.6
AY070885-1|AAL48507.1| 350|Drosophila melanogaster LD29420p pro... 28 8.3
AE014134-343|AAF51301.1| 350|Drosophila melanogaster CG11723-PA... 28 8.3
>AY122185-1|AAM52697.1| 310|Drosophila melanogaster LD42289p
protein.
Length = 310
Score = 66.5 bits (155), Expect = 3e-11
Identities = 40/128 (31%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +1
Query: 199 RPCGCKGCRTCLICETQYGAAXXXXXXXXXXXXSYVYCPYCNKACKGWDINS-YKEHPNH 375
RPCGCKG RTCL CE + A ++ YC C+ +GWD N K+H NH
Sbjct: 11 RPCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQCDLLQRGWDTNHVQKDHENH 70
Query: 376 -HGEPLSYRGVYIHLDFISELE-QQILIDTXTKYLGITHXVAXGTQLWT*SQLQKEKNRF 549
E L G+ + +F+S E Q++ D I+ + +K K R
Sbjct: 71 KKDEGLPLPGILVQEEFLSVDEGAQLIADLDDLPWDISQSGRRKQNFGPKTNFKKRKLRL 130
Query: 550 REFRGFSK 573
F GF +
Sbjct: 131 GSFAGFPR 138
>AE014134-1700|AAF52815.1| 304|Drosophila melanogaster CG4036-PA
protein.
Length = 304
Score = 66.5 bits (155), Expect = 3e-11
Identities = 40/128 (31%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +1
Query: 199 RPCGCKGCRTCLICETQYGAAXXXXXXXXXXXXSYVYCPYCNKACKGWDINS-YKEHPNH 375
RPCGCKG RTCL CE + A ++ YC C+ +GWD N K+H NH
Sbjct: 5 RPCGCKGVRTCLSCEQDFHIAKTSLREQFQQLEAWSYCIQCDLLQRGWDTNHVQKDHENH 64
Query: 376 -HGEPLSYRGVYIHLDFISELE-QQILIDTXTKYLGITHXVAXGTQLWT*SQLQKEKNRF 549
E L G+ + +F+S E Q++ D I+ + +K K R
Sbjct: 65 KKDEGLPLPGILVQEEFLSVDEGAQLIADLDDLPWDISQSGRRKQNFGPKTNFKKRKLRL 124
Query: 550 REFRGFSK 573
F GF +
Sbjct: 125 GSFAGFPR 132
>BT021254-1|AAX33402.1| 115|Drosophila melanogaster RE59362p
protein.
Length = 115
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 205 CGCKGCRTCLICETQYGAA 261
CGC G RTCL CE + A
Sbjct: 29 CGCMGVRTCLSCEQDFQVA 47
>BT001425-1|AAN71180.1| 120|Drosophila melanogaster GH14831p
protein.
Length = 120
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 205 CGCKGCRTCLICETQYGAA 261
CGC G RTCL CE + A
Sbjct: 34 CGCMGVRTCLSCEQDFQVA 52
>AE014134-1699|AAF52814.2| 93|Drosophila melanogaster CG18854-PB,
isoform B protein.
Length = 93
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 205 CGCKGCRTCLICETQYGAA 261
CGC G RTCL CE + A
Sbjct: 7 CGCMGVRTCLSCEQDFQVA 25
>AE014134-1698|AAG22425.1| 93|Drosophila melanogaster CG18854-PA,
isoform A protein.
Length = 93
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 205 CGCKGCRTCLICETQYGAA 261
CGC G RTCL CE + A
Sbjct: 7 CGCMGVRTCLSCEQDFQVA 25
>AE014134-1697|AAN10708.1| 120|Drosophila melanogaster CG18854-PC,
isoform C protein.
Length = 120
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 205 CGCKGCRTCLICETQYGAA 261
CGC G RTCL CE + A
Sbjct: 34 CGCMGVRTCLSCEQDFQVA 52
>AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-PA
protein.
Length = 706
Score = 26.2 bits (55), Expect(2) = 2.6
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1
Query: 352 SYKEHPNHHGEP 387
S+ HPNHHG P
Sbjct: 287 SHPNHPNHHGHP 298
Score = 22.2 bits (45), Expect(2) = 2.6
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 364 HPNHHGEPL 390
HP+HHG P+
Sbjct: 297 HPHHHGPPV 305
>AY070885-1|AAL48507.1| 350|Drosophila melanogaster LD29420p
protein.
Length = 350
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 244 FHRSNTSYNLCSRKVSVSFWITQSCTIE 161
+H SN+SY + SRK SF S +E
Sbjct: 312 YHLSNSSYQISSRKTPTSFDYVDSSMVE 339
>AE014134-343|AAF51301.1| 350|Drosophila melanogaster CG11723-PA
protein.
Length = 350
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 244 FHRSNTSYNLCSRKVSVSFWITQSCTIE 161
+H SN+SY + SRK SF S +E
Sbjct: 312 YHLSNSSYQISSRKTPTSFDYVDSSMVE 339
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,920,784
Number of Sequences: 53049
Number of extensions: 429455
Number of successful extensions: 1348
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -