Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_O01
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00050-6|AAM22064.1|  208|Caenorhabditis elegans Hypothetical pr...    36   0.022
U00050-5|AAM22063.1|  291|Caenorhabditis elegans Hypothetical pr...    36   0.022

>U00050-6|AAM22064.1|  208|Caenorhabditis elegans Hypothetical
           protein F09F7.7b protein.
          Length = 208

 Score = 35.9 bits (79), Expect = 0.022
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 497 KEXNYGPKVNFKKKKIVSGNFEGFPSF 577
           ++ +YGPKVNFK KK+ +  F G P +
Sbjct: 118 RKQDYGPKVNFKHKKVKTDTFVGMPEY 144



 Score = 31.1 bits (67), Expect = 0.62
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 205 CGCKGCRTCLICET 246
           CGCKG R C +CET
Sbjct: 8   CGCKGARFCALCET 21


>U00050-5|AAM22063.1|  291|Caenorhabditis elegans Hypothetical
           protein F09F7.7a protein.
          Length = 291

 Score = 35.9 bits (79), Expect = 0.022
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +2

Query: 497 KEXNYGPKVNFKKKKIVSGNFEGFPSF 577
           ++ +YGPKVNFK KK+ +  F G P +
Sbjct: 118 RKQDYGPKVNFKHKKVKTDTFVGMPEY 144



 Score = 31.1 bits (67), Expect = 0.62
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +1

Query: 205 CGCKGCRTCLICET 246
           CGCKG R C +CET
Sbjct: 8   CGCKGARFCALCET 21


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,103,657
Number of Sequences: 27780
Number of extensions: 227072
Number of successful extensions: 554
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)