Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N24
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.72 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.72 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.72 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.72 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    22   5.1  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    22   5.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   6.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.9  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 654 RRAGMATNSRLPSPINFXASHRKGF 580
           +RAG  T S +  P+     HR GF
Sbjct: 183 KRAGPRTESAVYEPVRIMGVHRPGF 207


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 393 LRTKMYLTGIXIWSVYVKVSLLSCAETKWILK 488
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 123 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 154


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 393 LRTKMYLTGIXIWSVYVKVSLLSCAETKWILK 488
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 393 LRTKMYLTGIXIWSVYVKVSLLSCAETKWILK 488
           + T  Y+TGI +W + +  + +  A  K+  K
Sbjct: 356 IHTSSYMTGIWVWLINISATYICYAFGKFSCK 387


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 55  SFQSKVVTAHNGVTLTKP 2
           +FQ+ VV  HNG  L  P
Sbjct: 103 TFQTNVVVKHNGSCLYVP 120


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 55  SFQSKVVTAHNGVTLTKP 2
           +FQ+ VV  HNG  L  P
Sbjct: 103 TFQTNVVVKHNGSCLYVP 120


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 354 DNVLSSCST*PLELRTKMYL 413
           D  L+S    P+++RTK+YL
Sbjct: 107 DETLNSKPLKPVKIRTKVYL 126


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 354 DNVLSSCST*PLELRTKMYL 413
           D  L+S    P+++RTK+YL
Sbjct: 103 DETLNSKPLKPVKIRTKVYL 122


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 33  VTTLLWNELNLDFLIQLTK 89
           + T+ W ELN D+  Q++K
Sbjct: 323 IGTVSWCELNFDWSSQVSK 341


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/23 (26%), Positives = 16/23 (69%)
 Frame = -2

Query: 134 VGISSAIFVVLVAILLRELYKKI 66
           +G+S+A+   L+ ++ +  Y+K+
Sbjct: 320 LGVSNAVITFLIVMVQKASYEKL 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,382
Number of Sequences: 336
Number of extensions: 3075
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)