Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_N24
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 316 2e-87
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 99 6e-22
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 90 2e-19
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 89 7e-19
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 86 4e-18
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 83 3e-17
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 83 3e-17
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 75 1e-14
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 73 5e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 71 1e-13
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 66 4e-12
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 64 1e-11
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 62 9e-11
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 61 1e-10
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 59 5e-10
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 57 3e-09
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 55 8e-09
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 38 0.002
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 37 0.002
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 32 0.083
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 30 0.34
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 29 0.44
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 28 1.4
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 27 2.4
SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|... 27 3.1
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 26 4.1
SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein L9|Schizosaccha... 26 5.5
SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomy... 26 5.5
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 7.2
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.2
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 25 7.2
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 25 9.5
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 25 9.5
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 25 9.5
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 316 bits (776), Expect = 2e-87
Identities = 145/174 (83%), Positives = 152/174 (87%)
Frame = +2
Query: 131 PHSTCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAG 310
P VLVGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL FHTN G I FNVWDTAG
Sbjct: 8 PTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAG 67
Query: 311 QXKFGGLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEGIPIVLCGNKVDIKD 490
Q K GGL DGYYIQ QC IIMFDVTSR+TYKNVP+W DLVRVCE IPIVLCGNKVD+K+
Sbjct: 68 QEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLVRVCENIPIVLCGNKVDVKE 127
Query: 491 RKVXAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWLAXKLIGDGNLEFVAMPAL 652
RKV AK I FHRKKNLQYYDISAKSNYNFEKPFLWLA KL+G+ NLEFVA PAL
Sbjct: 128 RKVKAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPNLEFVASPAL 181
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 98.7 bits (235), Expect = 6e-22
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 3/158 (1%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
+L+GD G GK+ + R + + Y++T+GV+ F ++ +WDTAGQ +F
Sbjct: 12 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFR 71
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVR-VCEGIPIVLCGNKVDIKDRKVX 502
+ YY II++DVT + ++ NV W ++ R EG+ +L GNK D+ D+KV
Sbjct: 72 TITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVV 131
Query: 503 AKTIV--FHRKKNLQYYDISAKSNYNFEKPFLWLAXKL 610
++ F N+ + + SAK + N E+ FL ++ ++
Sbjct: 132 EYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 90.2 bits (214), Expect = 2e-19
Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 4/166 (2%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
V +G+ GKT+ + R + +F+ Y AT+G++ + +R +WDTAGQ +F
Sbjct: 15 VFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFR 74
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEG--IPIVLCGNKVDIKDRKV 499
L Y AII++D+T+ ++ N W D VR G + IVL GNK D+ D++
Sbjct: 75 SLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIED-VRAERGDDVIIVLVGNKTDLADKRQ 133
Query: 500 XAKTIVFHRKKNLQ--YYDISAKSNYNFEKPFLWLAXKLIGDGNLE 631
+ + K L+ + + SAK+ +N + F +A L G N+E
Sbjct: 134 VTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVE 179
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 88.6 bits (210), Expect = 7e-19
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE--VHPLXFHTNRGPIRFNVWDTAGQXK 319
VL+GD GK++ V R + +F+ +T+G L N ++ +WDTAGQ +
Sbjct: 18 VLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS-VKLEIWDTAGQER 76
Query: 320 FGGLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVC-EGIPIVLCGNKVDI-KDR 493
+ L YY CAI+++D+T + + +W +L R EGI I L GNK+D+ ++R
Sbjct: 77 YKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQER 136
Query: 494 KVXAK--TIVFHRKKNLQYYDISAKSNYNFEKPFLWLAXKL 610
+ K + + NL +++ SAK+ N + F +A KL
Sbjct: 137 RAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKL 177
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 86.2 bits (204), Expect = 4e-18
Identities = 42/157 (26%), Positives = 85/157 (54%), Gaps = 9/157 (5%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
+++G+ G GKT+ + +++ +F K Y AT+G + + + +WDTAGQ +F
Sbjct: 12 IILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQ 71
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXD-LVRVC----EGIPIVLCGNKVDIKD 490
L +Y C ++++DV + +++ + +W + L++ E P +L GNKVD+++
Sbjct: 72 SLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDVEE 131
Query: 491 RK---VXAKTIVF-HRKKNLQYYDISAKSNYNFEKPF 589
+K +K + F + + Y++ SAK N ++ F
Sbjct: 132 QKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAF 168
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 83.4 bits (197), Expect = 3e-17
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
VL+GD G GK+ + R EF + +T+GVE + I+ +WDTAGQ ++
Sbjct: 14 VLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYR 73
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVCE-GIPIVLCGNKVDIKDRKVX 502
+ YY A+I++D+T + ++ NV W +L + I I+L GNK D+ +
Sbjct: 74 AITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAV 133
Query: 503 A--KTIVFHRKKNLQYYDISAKSNYNFEKPF 589
+ + F + NL + + SA N E+ F
Sbjct: 134 STEEAQAFAAENNLSFIETSAMDASNVEEAF 164
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 83.0 bits (196), Expect = 3e-17
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
+L+GD G GK+ + R F ++ T+G++ + I+ +WDTAGQ +F
Sbjct: 13 LLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFR 72
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVR-VCEGIPIVLCGNKVDIKDRKVX 502
+ YY ++++DVT + ++ NV W ++ + E + +L GNK D +D++
Sbjct: 73 TITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQV 132
Query: 503 A--KTIVFHRKKNLQYYDISAKSNYNFEKPFLWLAXKL 610
+ + + +++ + SAK+N N ++ F LA ++
Sbjct: 133 SFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 74.5 bits (175), Expect = 1e-14
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
V++GD G GKT + + + +F ++Y AT+G + + + +WDTAGQ +F
Sbjct: 12 VILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQ 71
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVCE----GIPIVLCGNKVDIKDR 493
L +Y C +I+++V + ++ +V NW + + P ++ GN++D KD
Sbjct: 72 SLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID-KDA 130
Query: 494 KVXA----KTIVFHRKK---NLQYYDISAKSNYN 574
A + + + + K N+ +++ SAK N N
Sbjct: 131 SKRAVSLHRALDYCKSKHGSNMIHFEASAKENTN 164
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 72.5 bits (170), Expect = 5e-14
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +2
Query: 131 PHSTCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAG 310
P CV+VGDG GKT + + T +F YV T+ + + + P ++DTAG
Sbjct: 2 PTIKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTV-FDNYAVTVMIGDEPYTLGLFDTAG 60
Query: 311 QXKFGGLXDGYYIQXQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIK 487
Q + L Y Q ++ F VTS +++NV W ++ C G+P ++ G ++D++
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQIDLR 120
Query: 488 D 490
D
Sbjct: 121 D 121
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 71.3 bits (167), Expect = 1e-13
Identities = 42/164 (25%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGP----IRFNVWDTAGQ 313
VL G GTGK+ ++R + +++ + T+G++ G I+ +WDTAGQ
Sbjct: 13 VLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQ 72
Query: 314 XKFGGLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEG-IPIVLCGNKVDIKD 490
KF + YY A++++DVT++ +++ + +W D+ + I +VL G+K D+++
Sbjct: 73 EKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQN 132
Query: 491 RKVXA--KTIVFHRKKNL-QYYDISAKSNYNFEKPFLWLAXKLI 613
++ + + F +K++ ++ S+ + N E+ FL + +I
Sbjct: 133 QRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTII 176
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 66.1 bits (154), Expect = 4e-12
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLXFHTNRGPIRFNVWDTAGQXKF 322
V+VGDGG GKT + +G F ++YV T+ + + + N I +WDTAGQ ++
Sbjct: 18 VVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEY 77
Query: 323 GGLXDGYYIQXQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDI-KDR 493
L Y ++ F + + NV W+ ++ C PIVL G K D+ KDR
Sbjct: 78 DRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVLVGLKADLRKDR 136
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 64.5 bits (150), Expect = 1e-11
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
V+VGDGG GK+ + + F +Y T+ G + +V DTAGQ ++
Sbjct: 12 VVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL-LDVLDTAGQEEYS 70
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRV--CEGIPIVLCGNKVDIKDRKV 499
+ + Y + ++++++TSR ++ + ++ ++RV + P+VL NK D++ +V
Sbjct: 71 AMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERV 130
Query: 500 XAKTIVFHRKKNLQ--YYDISAKSNYNFEKPF 589
++ K++ Y + SAK N E+ F
Sbjct: 131 VSRAEGEQLAKSMHCLYVETSAKLRLNVEEAF 162
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 61.7 bits (143), Expect = 9e-11
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 1/116 (0%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
V+VGDG GKT + G F + YV T+ E + + I +WDTAGQ +
Sbjct: 10 VIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHIELALWDTAGQEDYD 68
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPN-WHXDLVRVCEGIPIVLCGNKVDIKD 490
L Y +I F V + + NV W +++ C +PI+L G KVD+++
Sbjct: 69 RLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCSNLPILLVGCKVDLRN 124
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 61.3 bits (142), Expect = 1e-10
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
V+VGDG GKT+ + G F +YV T+ E + + ++ +WDTAGQ ++
Sbjct: 12 VVVGDGACGKTSLLSVFTLGYFPTEYVPTV-FENYVSDCRVDGKSVQLALWDTAGQEEYE 70
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIKDRKV 499
L Y + ++ F + S + +NV W ++ +C +P +L G K D++ V
Sbjct: 71 RLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLCPNVPFILVGMKADLRSDPV 129
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 59.3 bits (137), Expect = 5e-10
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLXFHTNRGPIRFNVWDTAGQXKF 322
V++GDG GKT+ + G F + Y T+ +H + N I ++WDTAGQ ++
Sbjct: 17 VILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNS--IELSLWDTAGQEEY 74
Query: 323 GGLXDGYYIQXQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIK 487
L Y +I F V SR + +NV W ++ C G+ +VL K D++
Sbjct: 75 DQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPGVKLVLVALKCDLR 130
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 56.8 bits (131), Expect = 3e-09
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
V+VGDG GKT + G F + YV T+ E + + + +WDTAGQ +
Sbjct: 10 VIVGDGACGKTCLLIVFSKGTFPEVYVPTV-FENYVADVEVDGRHVELALWDTAGQEDYD 68
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNV-PNWHXDLVRVCEGIPIVLCGNKVDIKD 490
L Y +I F V S + NV W +++ C +PI+L K D+++
Sbjct: 69 RLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSSLPILLVACKADLRN 124
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 55.2 bits (127), Expect = 8e-09
Identities = 27/111 (24%), Positives = 49/111 (44%)
Frame = +2
Query: 149 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFGG 328
++GD GKT+ + ++ G F+++ TLGV I F++WD GQ +F
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQREFVN 74
Query: 329 LXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEGIPIVLCGNKVD 481
+ + MFD++ + T ++ W+ + +L G K D
Sbjct: 75 MLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKTAVPILIGTKYD 125
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 37.5 bits (83), Expect = 0.002
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Frame = +2
Query: 149 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFGG 328
++G GK++ +++ F + Y T+ + + + DTAGQ ++
Sbjct: 11 VLGSRSVGKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQ-EFATEIIDTAGQDEYSI 69
Query: 329 LXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVR--VCEGIPIVLCGNKVDI-KDRKV 499
L + I ++++ +TS+ +++ V ++ E +PIV+ GNK D+ R V
Sbjct: 70 LNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQRAV 129
Query: 500 XAKT-IVFHRKKNLQYYDISAKSNYNFEKPF 589
A+ + + + SA+ N N + F
Sbjct: 130 TAEEGKALANEWKCAWTEASARHNENVARAF 160
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 37.1 bits (82), Expect = 0.002
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
+L+G GKTT +K L E + T G ++ L +RF +WD GQ
Sbjct: 20 LLLGLDNAGKTTILKC-LLNEDVNEVSPTFGFQIRTLEVEG----LRFTIWDIGGQKTLR 74
Query: 326 GLXDGYYIQXQCAIIMFDVTSRVTYKNVPNWHXDLVRVCEGI---PIVLCGNKVDIK--- 487
Y+ + I + D + + N +L+ V E + I++ NK D+
Sbjct: 75 NFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL-VEEKLLFTSILVLANKSDVSGAL 133
Query: 488 DRKVXAKTIVFHRKKNLQY--YDISAKSNYNFEKPFLWLAXKL 610
+ +K + + K+ + + +SA + N + WLA L
Sbjct: 134 SSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 31.9 bits (69), Expect = 0.083
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWDTAGQXKFG 325
+++G GKTT + + + + T+G V + + I+FNVWD GQ K
Sbjct: 25 LMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVETVTYKN----IKFNVWDVGGQDKIR 79
Query: 326 GLXDGYYIQXQCAIIMFD 379
L Y+ + I + D
Sbjct: 80 PLWRHYFTGTKGLIFVVD 97
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 29.9 bits (64), Expect = 0.34
Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Frame = +2
Query: 122 MICPHSTCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLXFHTNRGPIRFNVWD 301
++ H+ + +G GKTT + H+ + +A + +HP G +RF +D
Sbjct: 16 LVNKHAKMLFLGLDNAGKTTLL--HM---LKNDRLAVMQPTLHPTSEELAIGNVRFTTFD 70
Query: 302 TAGQXKFGGLXDGYYIQXQCAIIMFDVT--SRVTYKNVPNWHXDLVRVCEGIPIVLCGNK 475
G + L Y+ + + + D R++ + +P ++ GNK
Sbjct: 71 LGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNK 130
Query: 476 VD 481
+D
Sbjct: 131 ID 132
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 29.5 bits (63), Expect = 0.44
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVKR---HLTGEFEKKYVATLGVEVHPLXFHTN 271
++VG G+GKTTF+++ HL + + Y+ L V L + N
Sbjct: 12 IVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEAN 56
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 146 VLVGDGGTGKTTFVK 190
VL+G+ GTGKTTF K
Sbjct: 379 VLLGENGTGKTTFCK 393
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +2
Query: 98 QLKQRKWQMICPHSTCVLVGDGGTGKTTFVKRHLTGE 208
+L+++ + + + VL+G+ G+GKTT + ++L E
Sbjct: 514 KLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEE 550
>SPAC3F10.12c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 79 NSRSKIATKTTKMADDMPTFNV-CIGRRWWYWQNNLCQKTFDWRVREKIRCDSGCRSTSS 255
N+ K +T +T + T C+G WY L K + R RE I G + ++
Sbjct: 56 NTAHKNSTTSTVASSGNTTMEKPCVGSEEWYKAKRLSHKEVERRRREAI--SEGIKELAN 113
Query: 256 XIP 264
+P
Sbjct: 114 IVP 116
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -3
Query: 385 GYVEHDDSTLSLNIVSVXKTTKLXLSGCVPHIKTNW 278
G ++ D T + I+S + T GC P+ KTNW
Sbjct: 393 GEPQNVDETRASEILSQDELTVDVDLGCGPYAKTNW 428
>SPAC4G9.16c |rpl901|rpl9-1|60S ribosomal protein
L9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.8 bits (54), Expect = 5.5
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +2
Query: 467 GNKVDIKDRKVXAKTIVFHRKKNLQYYDISAKSNYNFEKPFLW 595
G VDIK R V K+NL++ DI K N K +W
Sbjct: 16 GVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQGNTIKFIVW 58
>SPAC824.07 |||hydroxyacylglutathione hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 256
Score = 25.8 bits (54), Expect = 5.5
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -1
Query: 492 LSLISTLFPHKTIGIPSHTRTKSXCQLGTFLYVTREVT 379
L+ + P T+ P H TKS + + ++ T E+T
Sbjct: 161 LNHVLAALPDDTVTYPGHEYTKSNAKFSSTIFSTPELT 198
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 533 NLQYYDISAKSNYNFEKPFLWL 598
N+ Y +I++K NY+ + + WL
Sbjct: 244 NMPYIEITSKHNYDIDFKYKWL 265
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 116 WQMICPHSTCVLVGDGGTGKTT 181
W+ + +LVGD G GKTT
Sbjct: 1180 WRCLLAKEPVLLVGDTGCGKTT 1201
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 143 CVLVGDGGTGKTTFVK 190
C+LVGD TGKT ++
Sbjct: 1872 CILVGDTATGKTCILR 1887
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +2
Query: 134 HSTCVLVGDGGTGKTTFVKRHLTGEF--EKKYVATLGVEV 247
H VL G GG GK+TF + G E K + + V++
Sbjct: 61 HKILVLSGKGGVGKSTFSSQLAWGLSLEEDKQIGLMDVDI 100
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 475 FVSAQDNRDTFTYTDQIXMPVRY 407
FVS + +DTF Y D + P +
Sbjct: 526 FVSPRSIKDTFAYADSVLYPSNF 548
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 531 FFLWKTIVFALTFLSLISTLFPHKTIGIPS 442
F LW V+ ++ +SL ++ FPH + + S
Sbjct: 11 FNLWSHGVYKISSISLSNSFFPHSFMFVKS 40
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -2
Query: 215 SRTLQSNVF*QRLFCQYHHLLPIHTLNVGISSAI 114
S + N Q + C +H+++ IH +N +S+A+
Sbjct: 480 SNVIPENNRQQFIRCVFHNIMQIHAVNSRLSNAL 513
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,592,912
Number of Sequences: 5004
Number of extensions: 51034
Number of successful extensions: 214
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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