Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N21
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0105 - 4337047-4337079,4337175-4337242,4337323-4337425,433...   207   5e-54
08_02_1361 - 26398987-26399019,26399320-26399387,26399458-263995...   198   3e-51
02_05_1273 + 35381626-35382486,35382567-35382691,35384851-353854...    30   1.4  
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196...    28   5.6  

>09_02_0105 -
           4337047-4337079,4337175-4337242,4337323-4337425,
           4337507-4337737,4339307-4339347,4339437-4339473,
           4339603-4339605
          Length = 171

 Score =  207 bits (506), Expect = 5e-54
 Identities = 100/158 (63%), Positives = 119/158 (75%), Gaps = 1/158 (0%)
 Frame = -1

Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
           +YSRE +NP KS KA G +LRVHFKNT ETA AIRK+PL +A RYL++VI  K+ IPFRR
Sbjct: 3   KYSREANNPTKSSKAMGRDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPFRR 62

Query: 471 FNGGVGRCAQAK-QFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNR 295
           + GGVGR AQAK +    QGRWP KSA F+L LL+N ESNA+ K LDVD   + HIQVN+
Sbjct: 63  YCGGVGRTAQAKSRHSNGQGRWPAKSARFILDLLKNAESNAEVKGLDVDTLYVSHIQVNQ 122

Query: 294 APCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
           A   RRRTYR HGRINPYM  PCHIE+  SE+E+ V +
Sbjct: 123 AQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKK 160


>08_02_1361 -
           26398987-26399019,26399320-26399387,26399458-26399560,
           26399658-26399888,26400791-26400826,26400891-26400931,
           26401028-26401064,26401158-26401160
          Length = 183

 Score =  198 bits (483), Expect = 3e-51
 Identities = 102/178 (57%), Positives = 121/178 (67%), Gaps = 13/178 (7%)
 Frame = -1

Query: 651 RYSREPDNPAKSCKAXGSNLRVHFK------------NTYETAMAIRKMPLRRAVRYLKN 508
           +YS EP NP KS KA G +LRVHFK            NT ETA A+RK+PL +A RYL++
Sbjct: 3   KYSTEPSNPTKSAKAMGRDLRVHFKVIVFARFVQCCSNTRETAFALRKLPLVKAKRYLED 62

Query: 507 VIEKKECIPFRRFNGGVGRCAQAKQFGTT-QGRWPKKSAEFLLQLLRNXESNADNKTLDV 331
           VI  K+ IPFRR+ GGVGR AQ K   +  QGRWP KSA F+L LL+N ESNAD K LDV
Sbjct: 63  VIAHKQAIPFRRYCGGVGRTAQVKSRQSNGQGRWPAKSARFILDLLKNAESNADVKGLDV 122

Query: 330 DRXVIDHIQVNRAPCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVARVAPTDDAP 157
           D   + HIQVN+A   RRRTYR HGRINPYM  PCH+E+  SE+E+AV +   T  AP
Sbjct: 123 DNLFVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHVELILSEKEEAVKKEPETTIAP 180


>02_05_1273 +
           35381626-35382486,35382567-35382691,35384851-35385450,
           35385550-35385841,35386199-35386364,35386664-35386707,
           35386866-35386979,35387171-35387290,35387541-35387626,
           35388340-35388502
          Length = 856

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
 Frame = -1

Query: 516 LKNVIEKKECIPFRRFNGGVGRCAQAKQ--FGTTQGRWPKKSAEFLLQLLRNXESNAD-- 349
           L N++E  E     R     GR A+  Q     +  RWP ++AE      RN E NA+  
Sbjct: 400 LDNMVEMHETQVDNRLQDEAGRDARFWQPSLDDSLDRWPNETAE---DAERNWEDNAEEL 456

Query: 348 -NKTLDVDRXVIDHIQ 304
            ++T++ D    DH+Q
Sbjct: 457 HSETMEDDAREHDHLQ 472


>01_05_0279 + 20318440-20318688,20318785-20318931,20319449-20319611,
            20319770-20319887,20320607-20320676,20320774-20320854,
            20320924-20320959,20321129-20321149,20321586-20321642,
            20321716-20321827,20321905-20322178,20322454-20322556,
            20323244-20323459,20324615-20324665,20325339-20327963
          Length = 1440

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = -1

Query: 477  RRFNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXE--SNADNKTLDVDRXVIDHIQ 304
            R  +G V RC           R  K   EF  Q+ +  E  S  + + L +    I H+ 
Sbjct: 1011 RNLSGRVRRCRMHDIIRLLALR--KSKEEFFCQVYKGSEACSIENTRRLSIQNVSIQHLS 1068

Query: 303  VNRAPCLR 280
             + APCLR
Sbjct: 1069 GSSAPCLR 1076


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,389,968
Number of Sequences: 37544
Number of extensions: 257359
Number of successful extensions: 570
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)