Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_N21
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 244 2e-64
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 244 2e-64
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 244 2e-64
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 244 2e-64
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 244 2e-64
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 244 2e-64
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 241 2e-63
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 71 5e-12
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 244 bits (598), Expect = 2e-64
Identities = 108/157 (68%), Positives = 131/157 (83%)
Frame = -1
Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
RYS +P+NP KSCK+ GSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRR 62
Query: 471 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRA 292
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+N ESNA+ K LDVD VI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 291 PCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
P +RRRTYR HGRINPYM PCHIE+ +E+E V +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 244 bits (598), Expect = 2e-64
Identities = 108/157 (68%), Positives = 131/157 (83%)
Frame = -1
Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
RYS +P+NP KSCK+ GSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRR 62
Query: 471 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRA 292
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+N ESNA+ K LDVD VI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 291 PCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
P +RRRTYR HGRINPYM PCHIE+ +E+E V +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 244 bits (598), Expect = 2e-64
Identities = 108/157 (68%), Positives = 131/157 (83%)
Frame = -1
Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
RYS +P+NP KSCK+ GSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRR 62
Query: 471 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRA 292
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+N ESNA+ K LDVD VI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 291 PCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
P +RRRTYR HGRINPYM PCHIE+ +E+E V +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 244 bits (598), Expect = 2e-64
Identities = 108/157 (68%), Positives = 131/157 (83%)
Frame = -1
Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
RYS +P+NP KSCK+ GSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRR 62
Query: 471 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRA 292
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+N ESNA+ K LDVD VI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 291 PCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
P +RRRTYR HGRINPYM PCHIE+ +E+E V +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 244 bits (598), Expect = 2e-64
Identities = 108/157 (68%), Positives = 131/157 (83%)
Frame = -1
Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
RYS +P+NP KSCK+ GSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRR 62
Query: 471 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRA 292
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+N ESNA+ K LDVD VI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 291 PCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
P +RRRTYR HGRINPYM PCHIE+ +E+E V +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 244 bits (598), Expect = 2e-64
Identities = 108/157 (68%), Positives = 131/157 (83%)
Frame = -1
Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
RYS +P+NP KSCK+ GSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRR 62
Query: 471 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRA 292
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+N ESNA+ K LDVD VI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 291 PCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
P +RRRTYR HGRINPYM PCHIE+ +E+E V +
Sbjct: 123 PKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 241 bits (590), Expect = 2e-63
Identities = 107/157 (68%), Positives = 130/157 (82%)
Frame = -1
Query: 651 RYSREPDNPAKSCKAXGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRR 472
RYS +P+NP KSCK+ GSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR
Sbjct: 3 RYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRR 62
Query: 471 FNGGVGRCAQAKQFGTTQGRWPKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRA 292
+NGGVGRCAQAKQ+G TQGRWPKKSAEFLL +L+N ESNA+ K LDVD VI+HIQVN+A
Sbjct: 63 YNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKA 122
Query: 291 PCLRRRTYRXHGRINPYMXXPCHIEVCXSEREDAVAR 181
P +RRRTYR GRINPYM PCHIE+ +E+E V +
Sbjct: 123 PKMRRRTYRARGRINPYMSSPCHIEMILTEKEQIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 70.5 bits (165), Expect = 5e-12
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = -1
Query: 408 PKKSAEFLLQLLRNXESNADNKTLDVDRXVIDHIQVNRAPCLRRRTYRXHGRINPYMXXP 229
PK+ F L+ +SNA+ K LD+D +I+ IQVN+AP + TYR HG+INPY+
Sbjct: 21 PKRVLNFCCTCLK-MQSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSA 79
Query: 228 CHIEVCXSER 199
CHIE+ +E+
Sbjct: 80 CHIEMILTEK 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,822,827
Number of Sequences: 237096
Number of extensions: 1330756
Number of successful extensions: 2545
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2545
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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