Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N20
         (588 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical ...   172   2e-43
Z73911-4|CAA98141.2|  625|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical ...    27   7.5  
Z81545-5|CAB04440.1|  389|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z46267-2|CAC42301.1|  600|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z46267-1|CAC42302.1|  389|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AC006729-1|AAK93861.1|  319|Caenorhabditis elegans Hypothetical
           protein Y24D9A.8a protein.
          Length = 319

 Score =  172 bits (418), Expect = 2e-43
 Identities = 87/145 (60%), Positives = 108/145 (74%)
 Frame = +2

Query: 149 MSALXQLKQHSTVVADTGDFEAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKD 328
           MS L QLK  S VVADTGDF A+KE++PTDATTNPSLIL+A+ MEQY  ++D+++ Y K+
Sbjct: 1   MSVLEQLKGASVVVADTGDFNAIKEFQPTDATTNPSLILAASKMEQYAALIDQSVAYAKE 60

Query: 329 NGSSIEXQVAETLDMLSVLFGCEILKIIPGRVSVEVDAXLSFDKDASIAKAIKFINLFAE 508
           + S  +  +   +D L V+FG EILK IPGRVS EVDA LSFD  ASI +A+  I  + +
Sbjct: 61  HASGHQEVLQAAMDRLFVVFGKEILKTIPGRVSTEVDARLSFDTQASIDRALGLIAQYEK 120

Query: 509 HGIKKXRILIKLASTWEGIQAAKEL 583
            GI K RILIKLASTWEGI+AAK L
Sbjct: 121 EGISKDRILIKLASTWEGIRAAKFL 145


>Z73911-4|CAA98141.2|  625|Caenorhabditis elegans Hypothetical
           protein T12A7.1 protein.
          Length = 625

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
 Frame = +2

Query: 230 PTDATTNPSLILSAAG-MEQYQHILDKAIKYGKDNGSSIEXQVA-ETLDMLSVLFGCEIL 403
           P D     S ++   G M  Y+H L     YG  N S I  +VA +   M+      +IL
Sbjct: 401 PLDLNRQSSSVVGINGVMNAYRHALQNVTLYGPTNFSPIIVEVANKAQKMMKTTARYQIL 460

Query: 404 KIIPGRVSVEVDAXLSFDKDAS 469
            II   +  ++ A ++   +AS
Sbjct: 461 LIITDGIISDMYATINTVINAS 482


>U43283-1|AAC69025.1|  412|Caenorhabditis elegans Hypothetical
           protein T25G12.5 protein.
          Length = 412

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
 Frame = +2

Query: 209 EAMKEYKPTDATTNPSLILSAAGMEQYQHILDKAIKYGKDN---GSSIEXQVAETLDMLS 379
           E  K    T   T P++   A G+      LD A +Y  +    G+ I      +  +  
Sbjct: 255 EGFKVAMKTFDKTRPTVAALATGVAY--RCLDVATQYSLERKAFGTQIANHQGVSFLLAE 312

Query: 380 VLFGCEILKIIPGRVSVEVDAXLSFDKDASIAK 478
           +   CE+ +++  +   EVDA       ASIAK
Sbjct: 313 MAINCELARLMTYKSGAEVDAGRPGSYYASIAK 345


>AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical
           protein Y67H2A.10 protein.
          Length = 608

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -2

Query: 389 QKAHSAYPKFQPLVXQWSFHYPFHI**LYQECADTVPYQQQ 267
           Q  HS YP+ Q +  Q   H P H    YQ+      YQQQ
Sbjct: 479 QPQHSPYPQQQQMHHQMVQHSPHH----YQQQQQQQQYQQQ 515


>Z81545-5|CAB04440.1|  389|Caenorhabditis elegans Hypothetical
           protein F49H6.5 protein.
          Length = 389

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 455 DKDASIAKAIKFINLFAEHGIKKXRI 532
           DK  S ++ ++ + LFA HG+ K R+
Sbjct: 103 DKMLSNSEVLRLVKLFAAHGVDKVRL 128


>Z46267-2|CAC42301.1|  600|Caenorhabditis elegans Hypothetical
           protein F49E2.1b protein.
          Length = 600

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 455 DKDASIAKAIKFINLFAEHGIKKXRI 532
           DK  S ++ ++ + LFA HG+ K R+
Sbjct: 103 DKMLSNSEVLRLVKLFAAHGVDKVRL 128


>Z46267-1|CAC42302.1|  389|Caenorhabditis elegans Hypothetical
           protein F49E2.1a protein.
          Length = 389

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 455 DKDASIAKAIKFINLFAEHGIKKXRI 532
           DK  S ++ ++ + LFA HG+ K R+
Sbjct: 103 DKMLSNSEVLRLVKLFAAHGVDKVRL 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,691,873
Number of Sequences: 27780
Number of extensions: 249241
Number of successful extensions: 586
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)