Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N17
         (440 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0991 - 8358309-8358338,8359115-8359393,8359964-8360092,836...    27   5.1  
04_03_0314 - 14238620-14240128                                         27   5.1  
07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948     27   6.7  
06_01_0471 - 3341839-3341881,3341987-3342080,3344724-3344914,334...    27   8.8  
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522...    27   8.8  

>07_01_0991 -
           8358309-8358338,8359115-8359393,8359964-8360092,
           8360317-8360598,8361400-8361525,8363490-8363870
          Length = 408

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -3

Query: 180 NVPTATTAIAPSAKALAADVL 118
           ++PT TTA +P+ KAL  D+L
Sbjct: 25  HLPTTTTAASPALKALGEDLL 45


>04_03_0314 - 14238620-14240128
          Length = 502

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 195 HQVKRNVPTATTAIAPSAKALAADV 121
           H +  N+ T   A+ P+A+ALAAD+
Sbjct: 145 HPLSPNLSTLAVALTPAAEALAADL 169


>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
          Length = 712

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 229 SSVRWGNLPFLPPSKEKCSDRHNRHRA 149
           S +RW    FLPPS +  SD H + RA
Sbjct: 498 SRLRWACDRFLPPSTQLQSDTHWKTRA 524


>06_01_0471 -
           3341839-3341881,3341987-3342080,3344724-3344914,
           3345025-3345248
          Length = 183

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +1

Query: 136 CFSTRRDGGCGG 171
           C   RRDGGCGG
Sbjct: 87  CLHRRRDGGCGG 98


>01_03_0175 +
           13450869-13451013,13451293-13451372,13451417-13452240,
           13452287-13452638
          Length = 466

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +3

Query: 162 LWRSEHFSLLGGKKGRFPHRTELKARIGEXSXXT 263
           LW  EHF L  G +   PHR    + IG  S  T
Sbjct: 67  LWSIEHFGLRTGLRRPLPHRHLRVSDIGIDSTST 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,605,007
Number of Sequences: 37544
Number of extensions: 173008
Number of successful extensions: 445
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 444
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)