Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N17
         (440 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U54559-1|AAD03465.1|  352|Homo sapiens translation initiation fa...    29   7.1  
CR456906-1|CAG33187.1|  352|Homo sapiens EIF3S3 protein.               29   7.1  
BT019594-1|AAV38401.1|  352|Homo sapiens eukaryotic translation ...    29   7.1  
BC090880-1|AAH90880.1|  349|Homo sapiens EIF3H protein protein.        29   7.1  
BC000386-1|AAH00386.1|  352|Homo sapiens eukaryotic translation ...    29   7.1  
AK222620-1|BAD96340.1|  352|Homo sapiens eukaryotic translation ...    29   7.1  
AF092576-1|AAC84044.1|  352|Homo sapiens translation initiation ...    29   7.1  

>U54559-1|AAD03465.1|  352|Homo sapiens translation initiation
           factor eIF3 p40 subunit protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = -1

Query: 233 LELRAVGEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 63
           ++ ++ GEP        ++F+PPQPP+R+  +L   Q    C  N   +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344


>CR456906-1|CAG33187.1|  352|Homo sapiens EIF3S3 protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = -1

Query: 233 LELRAVGEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 63
           ++ ++ GEP        ++F+PPQPP+R+  +L   Q    C  N   +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344


>BT019594-1|AAV38401.1|  352|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 3 gamma, 40kDa protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = -1

Query: 233 LELRAVGEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 63
           ++ ++ GEP        ++F+PPQPP+R+  +L   Q    C  N   +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344


>BC090880-1|AAH90880.1|  349|Homo sapiens EIF3H protein protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = -1

Query: 233 LELRAVGEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 63
           ++ ++ GEP        ++F+PPQPP+R+  +L   Q    C  N   +++QN G LF+A
Sbjct: 283 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 341


>BC000386-1|AAH00386.1|  352|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 3 gamma, 40kDa protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = -1

Query: 233 LELRAVGEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 63
           ++ ++ GEP        ++F+PPQPP+R+  +L   Q    C  N   +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344


>AK222620-1|BAD96340.1|  352|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 3 gamma, 40kDa variant
           protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = -1

Query: 233 LELRAVGEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 63
           ++ ++ GEP        ++F+PPQPP+R+  +L   Q    C  N   +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344


>AF092576-1|AAC84044.1|  352|Homo sapiens translation initiation
           factor eIF3 p40 subunit protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
 Frame = -1

Query: 233 LELRAVGEPSFLATK*REMFRPPQPPSRL--VLKH*QRMCCCPAN*NSWSSQN-GNLFVA 63
           ++ ++ GEP        ++F+PPQPP+R+  +L   Q    C  N   +++QN G LF+A
Sbjct: 286 MQRQSRGEPPLPEEDLSKLFKPPQPPARMDSLLIAGQINTYC-QNIKEFTAQNLGKLFMA 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,103,298
Number of Sequences: 237096
Number of extensions: 875599
Number of successful extensions: 1732
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)