Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N17
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    29   0.030
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    29   0.030
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    29   0.030
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.030
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = -3

Query: 192 QVKRNVPTATTAIAPSAKALAADVLLPCELEFLVIAKWQFICGNXKTTMSCDGTLCTGT 16
           ++ +N    + A+A  A A+   +++P  + +L++ KW F     K  ++CD   CT +
Sbjct: 68  RIVQNFFIVSLAVADLAVAI---LVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTAS 123


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.030
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = -3

Query: 192 QVKRNVPTATTAIAPSAKALAADVLLPCELEFLVIAKWQFICGNXKTTMSCDGTLCTGT 16
           ++ +N    + A+A  A A+   +++P  + +L++ KW F     K  ++CD   CT +
Sbjct: 68  RIVQNFFIVSLAVADLAVAI---LVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTAS 123


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 0.030
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = -3

Query: 192 QVKRNVPTATTAIAPSAKALAADVLLPCELEFLVIAKWQFICGNXKTTMSCDGTLCTGT 16
           ++ +N    + A+A  A A+   +++P  + +L++ KW F     K  ++CD   CT +
Sbjct: 68  RIVQNFFIVSLAVADLAVAI---LVMPFNVAYLLLGKWIFGIHLCKLWLTCDVLCCTAS 123


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/47 (23%), Positives = 18/47 (38%)
 Frame = -1

Query: 290  EQNYFSXAXCXXTXFADSRLELRAVGEPSFLATK*REMFRPPQPPSR 150
            E N  S A C      +    + A G+      + R++    + PSR
Sbjct: 1879 ESNEISEAECDRDQLVNRNYGVNARGKDGMTTEEMRKLIERNEAPSR 1925


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,684
Number of Sequences: 438
Number of extensions: 1831
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)