Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_N14
(592 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 225 5e-58
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 205 5e-52
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 205 7e-52
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 172 6e-42
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 161 1e-38
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 143 3e-33
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 137 2e-31
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 119 4e-26
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 113 2e-24
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 112 7e-24
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 109 5e-23
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 100 2e-20
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 66 1e-18
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 90 3e-17
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 88 2e-16
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 77 4e-13
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 76 5e-13
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 69 8e-11
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 68 1e-10
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 64 2e-09
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 61 2e-08
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 54 2e-06
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 54 2e-06
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 52 1e-05
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 51 2e-05
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 50 3e-05
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 49 7e-05
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 45 0.001
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 43 0.005
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 42 0.008
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 42 0.008
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 34 2.9
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 5.0
UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3; Proteo... 33 6.6
UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 225 bits (551), Expect = 5e-58
Identities = 105/152 (69%), Positives = 117/152 (76%)
Frame = +3
Query: 69 RRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 248
++ L ++RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RVRKN
Sbjct: 7 QKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRKN 66
Query: 249 TEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMK 428
TEAR KGRHCGFGKR+GTANARMP K LW + KIDRHLYH LYMK
Sbjct: 67 TEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMK 126
Query: 429 ANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
GNVF NKRVLMEYIH+ KA+ + ML+DQ
Sbjct: 127 CKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 205 bits (501), Expect = 5e-52
Identities = 95/152 (62%), Positives = 111/152 (73%)
Frame = +3
Query: 69 RRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 248
++ L ++RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKN
Sbjct: 7 QKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKN 66
Query: 249 TEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMK 428
T AR KGRH G GKR+GTANARMP K W + KIDRH+YHSLY+K
Sbjct: 67 TLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLK 126
Query: 429 ANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
GNVF NKR+LME+IH+ KAD A +L+DQ
Sbjct: 127 VKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 205 bits (500), Expect = 7e-52
Identities = 94/145 (64%), Positives = 108/145 (74%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
++RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT AR KG
Sbjct: 6 VLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKG 65
Query: 270 RHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFX 449
RH G GKR+GTANARMP K W + KIDRH+YHSLY+K GNVF
Sbjct: 66 RHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFK 125
Query: 450 NKRVLMEYIHRXKADXAXTXMLSDQ 524
NKR+LME+IH+ KAD A +L+DQ
Sbjct: 126 NKRILMEHIHKLKADKARKKLLADQ 150
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 172 bits (418), Expect = 6e-42
Identities = 81/152 (53%), Positives = 99/152 (65%)
Frame = +3
Query: 69 RRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 248
++ L + CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR+R RKN
Sbjct: 7 QKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSRSRCRKN 66
Query: 249 TEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMK 428
AR KGRH G GKR+GTA+ARMP K LW A KID+HLYH LY +
Sbjct: 67 LIARRKGRHTGTGKRKGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQ 126
Query: 429 ANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
GN F NKRVL+++IH+ KA+ LSDQ
Sbjct: 127 CKGNQFKNKRVLIDHIHKKKAERLRAKQLSDQ 158
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 161 bits (390), Expect = 1e-38
Identities = 74/145 (51%), Positives = 95/145 (65%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSRAR RK EA+ G
Sbjct: 34 ILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSRARWRKMKEAKDMG 93
Query: 270 RHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFX 449
RH G G+R G+ ARMP KELW KIDRH+Y LYM+A GNVF
Sbjct: 94 RHNGVGRREGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFR 153
Query: 450 NKRVLMEYIHRXKADXAXTXMLSDQ 524
NKR L+E+IH+ K + L++Q
Sbjct: 154 NKRNLVEHIHKIKNEKKKERQLAEQ 178
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 143 bits (346), Expect = 3e-33
Identities = 74/154 (48%), Positives = 95/154 (61%)
Frame = +3
Query: 63 SCRRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 242
S ++ L ++ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+A
Sbjct: 5 SLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQAHCE 64
Query: 243 KNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLY 422
KNT KGRH GK +GTAN +P + W + KID H+ HSLY
Sbjct: 65 KNT---LKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLY 121
Query: 423 MKANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
++ NVF N+ +LME IH+ KAD A +L+DQ
Sbjct: 122 LRVKRNVFKNQWILMEQIHKPKADKACKKLLADQ 155
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 137 bits (331), Expect = 2e-31
Identities = 60/133 (45%), Positives = 84/133 (63%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
L+ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR R+R E G
Sbjct: 14 LLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSRNRIRSRKEEIKLG 73
Query: 270 RHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFX 449
RH G GKR+G+ N+R K +W + K++RHLY SLY+K+ GNVF
Sbjct: 74 RHEGLGKRKGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFK 133
Query: 450 NKRVLMEYIHRXK 488
NK++L E+IH+ K
Sbjct: 134 NKKILTEFIHKAK 146
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 119 bits (287), Expect = 4e-26
Identities = 63/172 (36%), Positives = 87/172 (50%), Gaps = 20/172 (11%)
Frame = +3
Query: 69 RRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----------- 215
++ L ++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 7 QKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTFPTLRGF 66
Query: 216 ---------AVHSRARVRKNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXX 368
+HSRAR + A+ GRH G+GKRRGT AR+P K LW
Sbjct: 67 HAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGTREARLPTKVLWLRRHRVLRRLL 126
Query: 369 XXXXTAXKIDRHLYHSLYMKANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
A KID+H+YHS+Y+K GNVF NKRVLME IH+ KA+ A L+DQ
Sbjct: 127 SKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSKAEKAREKSLADQ 178
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 113 bits (273), Expect = 2e-24
Identities = 55/129 (42%), Positives = 74/129 (57%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
+++CGK++V +P I +SR+ IR +I+ ++ K + SR R+R A+ G
Sbjct: 14 VLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSRGRIRARHAAKRLG 73
Query: 270 RHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFX 449
RH G GKRRGT ARMP K LW KIDRHLY +LY KA GN+F
Sbjct: 74 RHSGHGKRRGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFK 133
Query: 450 NKRVLMEYI 476
NKRVL+E+I
Sbjct: 134 NKRVLLEHI 142
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 112 bits (269), Expect = 7e-24
Identities = 56/151 (37%), Positives = 84/151 (55%)
Frame = +3
Query: 72 RGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 251
R L ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR R RK
Sbjct: 8 RRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSRGRCRKRL 67
Query: 252 EARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKA 431
EA+ KGRH G GKR GTANARMP K++W +I + + Y +A
Sbjct: 68 EAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRVFYKQA 127
Query: 432 NGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
G++F ++ + + I + KAD L++Q
Sbjct: 128 KGHLFKHRFHMKDCIIKRKADEQRAKELAEQ 158
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 109 bits (262), Expect = 5e-23
Identities = 49/129 (37%), Positives = 75/129 (58%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
L++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR R R E + KG
Sbjct: 14 LLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKG 73
Query: 270 RHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFX 449
RH G G R+G ARM KELW KIDR Y LY++A G F
Sbjct: 74 RHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFK 133
Query: 450 NKRVLMEYI 476
+K L ++
Sbjct: 134 SKHQLYMFL 142
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 100 bits (240), Expect = 2e-20
Identities = 50/138 (36%), Positives = 74/138 (53%)
Frame = +3
Query: 63 SCRRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 242
S +R + +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV+
Sbjct: 7 SVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVK 66
Query: 243 KNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLY 422
K E R KGR G G RRG A AR P KE W + KIDR +Y LY
Sbjct: 67 KLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLY 126
Query: 423 MKANGNVFXNKRVLMEYI 476
A G F ++ L Y+
Sbjct: 127 RMAKGGAFRSRSHLFLYM 144
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 65.7 bits (153), Expect(2) = 1e-18
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +3
Query: 93 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKGR 272
+RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K T AR +G
Sbjct: 49 LRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA-----------TLARRRGW 97
Query: 273 HCGFGKRRGT 302
H G KR+GT
Sbjct: 98 HMGIRKRKGT 107
Score = 49.6 bits (113), Expect(2) = 1e-18
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 393 IDRHLYHSLYMKANGNVF--XNKRVLMEYIHRXKADXAXTXMLSDQ 524
ID HLY SLY+K GNV +KR+ E+I + KAD A +LSDQ
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQ 153
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 90.2 bits (214), Expect = 3e-17
Identities = 46/111 (41%), Positives = 62/111 (55%)
Frame = +3
Query: 192 GLVIKKPVAVHSRARVRKNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXX 371
GL+I+KPV VHS +R+ +G+ G + GTANARM K W
Sbjct: 503 GLIIRKPVTVHSPGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLR 562
Query: 372 XXXTAXKIDRHLYHSLYMKANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
+ KIDR +YHSL +K GNVF NK L+++IH+ KAD A +L+DQ
Sbjct: 563 RYRESKKIDRRMYHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQ 613
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/138 (31%), Positives = 69/138 (50%)
Frame = +3
Query: 63 SCRRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 242
S +R + +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R
Sbjct: 4 STQRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAR 63
Query: 243 KNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLY 422
+ E + KGR G G R+G AR K W ID Y LY
Sbjct: 64 ELHEKKKKGRRRGPGSRKGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLY 123
Query: 423 MKANGNVFXNKRVLMEYI 476
K GN+F ++ L+ Y+
Sbjct: 124 KKVKGNLFKSRSHLLLYL 141
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 76.6 bits (180), Expect = 4e-13
Identities = 40/128 (31%), Positives = 60/128 (46%)
Frame = +3
Query: 93 MRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKGR 272
M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K E KGR
Sbjct: 14 MKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRIEQLAKGR 73
Query: 273 HCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFXN 452
G G RGT AR P K W T KID+ Y Y F +
Sbjct: 74 RRGEGSVRGTKYARFPRKRRWISRIRALRRELRELKTNNKIDKKTYRRYYRIIKSGSFVS 133
Query: 453 KRVLMEYI 476
+ L +I
Sbjct: 134 RAQLRNHI 141
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 76.2 bits (179), Expect = 5e-13
Identities = 34/115 (29%), Positives = 58/115 (50%)
Frame = +3
Query: 102 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKGRHCG 281
G +VW+DP +++++++ ++++R++I +G++ +P SR+R RK + KGR G
Sbjct: 23 GVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSRSRARKAAAQKAKGRRSG 82
Query: 282 FGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVF 446
G R+G+ANAR P K W I Y Y KA G +
Sbjct: 83 QGSRKGSANARNPRKSRWMRTIRAQRKELKGMREDDSISSSEYRYYYRKAKGGSY 137
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +3
Query: 87 LLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXK 266
++++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS ++ R
Sbjct: 23 IILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHS-----QSVHRRLF 77
Query: 267 GRHCGFGKRRG 299
G KRRG
Sbjct: 78 GDELEHAKRRG 88
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 68.9 bits (161), Expect = 8e-11
Identities = 35/129 (27%), Positives = 58/129 (44%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
++ GK ++W DP+E EIA +R++IR+++ G++ + +S+ R R E R G
Sbjct: 14 VLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSKGRARSRAEKRAYG 73
Query: 270 RHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFX 449
G G R+G + R K+ W + Y +Y KA+G F
Sbjct: 74 HRKGPGSRKGRSGGRKNEKDEWVSRIRAQRRRLRELRDDGPLTPTQYREVYNKASGGEFE 133
Query: 450 NKRVLMEYI 476
+ L YI
Sbjct: 134 DVARLEAYI 142
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/144 (26%), Positives = 63/144 (43%)
Frame = +3
Query: 63 SCRRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 242
S ++ L ++ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR R R
Sbjct: 5 SAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRAR 64
Query: 243 KNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLY 422
+ G G G R+G A AR K + + Y +Y
Sbjct: 65 ERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMY 124
Query: 423 MKANGNVFXNKRVLMEYIHRXKAD 494
ANG F + R L Y+ D
Sbjct: 125 NMANGGEFDSVRRLTNYVEENYGD 148
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 2/138 (1%)
Frame = +3
Query: 69 RRGLQPLLMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 242
+R L ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++ +
Sbjct: 6 QRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASK 65
Query: 243 KNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLY 422
R KGR G G+R+G A AR+ KE W IDR Y LY
Sbjct: 66 VRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLY 125
Query: 423 MKANGNVFXNKRVLMEYI 476
M A G F + L Y+
Sbjct: 126 MLAKGGTFRDLASLKRYM 143
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 60.9 bits (141), Expect = 2e-08
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
L+ K ++ + + ++ +R ++R ++K+GL+ KP +SR R R E R G
Sbjct: 10 LLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITHEKRKSG 69
Query: 270 RHCGFGKRRGTANAR-MPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVF 446
R G G RRGT AR KE+W ID+ + +LY A G F
Sbjct: 70 RRRGRGSRRGTRKARGAVGKEVWVPRIRRIRRFLNTLKHRGVIDKATWRNLYRMAKGGYF 129
Query: 447 XNKRVLMEYI 476
+ L Y+
Sbjct: 130 ESLAHLRTYM 139
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 54.0 bits (124), Expect = 2e-06
Identities = 39/107 (36%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = -1
Query: 535 RASAWSLSXFVXALSAXFLWMYSMSTRLXLNTLPFAF-M*SEWYRCLSIXLAVLYFRSNF 359
+A AWS S F+ L L L +PF + Y +++ L RS
Sbjct: 53 QAPAWSASSFLAGLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRH 112
Query: 358 LRTLCLCTHSSXCGIRALAVPLLLPKPQ*RPFXRASVFLRTRAREWT 218
R L L + GI+ALAVP L P PF R+ VF R RAREWT
Sbjct: 113 -RILILLIQVTFSGIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
L++CG K+ ++P + + + N+R+ I + K ++IKK + S R + + G
Sbjct: 13 LLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYRKKLRKAKKQSG 72
Query: 270 RHCGFGKRRGTANARMPXKELW 335
G G+R+GT NAR K LW
Sbjct: 73 LKRGIGRRKGTKNARKKYKILW 94
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 52.0 bits (119), Expect = 1e-05
Identities = 33/130 (25%), Positives = 56/130 (43%)
Frame = +3
Query: 102 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKGRHCG 281
G +++ DP +++IA+ +R +IR +I + KPV+ SR R + + K R
Sbjct: 19 GIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGRAQHKRRQKAK-RGSK 77
Query: 282 FGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFXNKRV 461
G ++G AR+ K+++ I + +LY K GN NK
Sbjct: 78 AGSKQGRMGARVGKKQVYVKKVRALRYLLAVFKDRKDITNPEFWALYKKVGGNTVRNKAH 137
Query: 462 LMEYIHRXKA 491
L + KA
Sbjct: 138 LHLLVDEIKA 147
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 50.8 bits (116), Expect = 2e-05
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +3
Query: 102 GKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHSRARVRKNTEARX-KGRH 275
G ++ + + I ++ ++ +R IR +IKDG +++ K V + S R+++ + R K
Sbjct: 18 GINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-SGGRLKERRKKRSLKSEG 76
Query: 276 CGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANG 437
G R+G AR K++W IDRH Y LY+K G
Sbjct: 77 KKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKG 130
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 50.4 bits (115), Expect = 3e-05
Identities = 31/133 (23%), Positives = 53/133 (39%)
Frame = +3
Query: 90 LMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARXKG 269
++ G ++ + P + ++ ++R +I GL+ +P SR R R + KG
Sbjct: 11 ILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRHIKKKKG 70
Query: 270 RHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMKANGNVFX 449
R G G R+G R +E W K++ ++ LY GN F
Sbjct: 71 RRRGHGSRKG---PRTDEEEAWKEKVRAMRRFLNTLKRKGKLEPRVWRQLYRMVKGNYFR 127
Query: 450 NKRVLMEYIHRXK 488
+ L YI+ K
Sbjct: 128 DLDHLKTYINEHK 140
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 49.2 bits (112), Expect = 7e-05
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = -3
Query: 590 LGGNTFLAALACLXYFIAAGLSLVAKHXRXGXVSLXPVDVLHEHTLVXEHITVRLHVE*V 411
+GGN + LA L +AA L L+ + L DVL E+ L+ EH+T+ L +E +
Sbjct: 51 VGGNLLCSLLASLLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGL 110
Query: 410 V*MPVNLXGSSVLQEQFS*NPLSLYP*FLXWHTRI 306
+ +P++L +V +Q + + L+L P L HT +
Sbjct: 111 IKVPIDLFVVTVPAQQATEDTLALNPESLRRHTSL 145
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 381 TAXKIDRHLYHSLYMKANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524
+A K+ H+ HSLY KA G VF NK +L+E+ ++ KAD +L+ Q
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQ 105
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -3
Query: 212 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 96
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 43.2 bits (97), Expect = 0.005
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 102 GKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 209
G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 16 GAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 42.3 bits (95), Expect = 0.008
Identities = 31/121 (25%), Positives = 51/121 (42%)
Frame = -3
Query: 500 GXVSLXPVDVLHEHTLVXEHITVRLHVE*VV*MPVNLXGSSVLQEQFS*NPLSLYP*FLX 321
G L + +L E + + + V+ V+ V L V E+ NP +P L
Sbjct: 43 GMDHLLVITLLAPGNAFYEKLFLHMQVQAVIRTIVTLLRFLVSPEKPVQNPHPSHPGPLL 102
Query: 320 WHTRIGXXXXXXXXXXXXXXXXLCVFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDL 141
+ +G VF+ G+D ++ LDD+ I D ++D+L GVG+ D
Sbjct: 103 GYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDF 162
Query: 140 I 138
I
Sbjct: 163 I 163
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 42.3 bits (95), Expect = 0.008
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 213 VAVHSRARVRKNTEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXK 392
V++H +R R AR K RH G+GK A R+ K L K
Sbjct: 2 VSIHFHSRSR----ARRKCRHTGYGKDTMEALRRI-MKRLTRRLKMLKRLLKKFCWNK-K 55
Query: 393 IDRHLY-HSLYMKANGNVFXNKRVLMEYIHRXKAD 494
ID+ +Y H ++MK G V+ NK VLME +H+ +
Sbjct: 56 IDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRE 90
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +2
Query: 197 RHQETCSSPL-PRPCPQKHRG-TXKGS-SLWLW*EK 295
RH TC+ P P CP H+G +GS S+WLW EK
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEK 36
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 5.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -1
Query: 220 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 101
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3;
Proteobacteria|Rep: Parallel beta-helix repeat -
Roseovarius sp. HTCC2601
Length = 10077
Score = 32.7 bits (71), Expect = 6.6
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 248 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFI 129
+ + GAG D RFLD T+ H T VL+G G DL++ +
Sbjct: 7542 ILVEGGAGADSIRFLDATTMTGHAT-VLAGAG-DDLVEIV 7579
>UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 662
Score = 32.3 bits (70), Expect = 8.7
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +3
Query: 108 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 215
K+V + N+ NE N+ N+ KM+KD +V +KPV
Sbjct: 557 KQVVSELNQNNENEPQNNLNNLEKMVKDQIVTEKPV 592
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,804,952
Number of Sequences: 1657284
Number of extensions: 10674289
Number of successful extensions: 24800
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 24116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24771
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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