BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_N14 (592 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.) 210 6e-55 SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 30 1.2 SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) 29 2.8 SB_1071| Best HMM Match : Ras (HMM E-Value=0) 27 8.7 >SB_7038| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 224 Score = 210 bits (513), Expect = 6e-55 Identities = 97/152 (63%), Positives = 113/152 (74%) Frame = +3 Query: 69 RRGLQPLLMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 248 ++ L L++CGKKK+WLDPNE NEIAN NSRQN+RK+IKDGL+IKKP VHSRARVRK Sbjct: 35 QKRLAASLLKCGKKKIWLDPNECNEIANANSRQNVRKLIKDGLIIKKPEIVHSRARVRKA 94 Query: 249 TEARXKGRHCGFGKRRGTANARMPXKELWXXXXXXXXXXXXXXXTAXKIDRHLYHSLYMK 428 EAR KGRH G GKR+GTANARMP K +W A KID H+YHSLYMK Sbjct: 95 DEARSKGRHSGHGKRKGTANARMPQKTIWIRRMRVLRRLLRKYREAKKIDNHMYHSLYMK 154 Query: 429 ANGNVFXNKRVLMEYIHRXKADXAXTXMLSDQ 524 + GNVF NKRVLMEYIH+ KA+ A + +LSDQ Sbjct: 155 SKGNVFKNKRVLMEYIHKKKAEKARSKLLSDQ 186 >SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) Length = 1644 Score = 30.3 bits (65), Expect = 1.2 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = +1 Query: 7 INSFLC-ALDLTAAQDEFP-QAAEEACSLCLCDVVKRRCG 120 I S +C L + A +D P Q+ C +C DVV RRCG Sbjct: 1397 IQSAVCKVLGMPAKKDHTPNQSPIFVCPVCSVDVVTRRCG 1436 >SB_57495| Best HMM Match : G_glu_transpept (HMM E-Value=0) Length = 761 Score = 29.1 bits (62), Expect = 2.8 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = +1 Query: 19 LCALDLTAAQDEFPQAAEEACSLCLCDVVKRRCGWIQMKSMRSQ 150 L LD+ ++ DEF Q +E S C C VVK R I++K R Q Sbjct: 653 LSELDVESSDDEFLQPKQENKSAC-CRVVKGRP--IEVKPFRDQ 693 >SB_1071| Best HMM Match : Ras (HMM E-Value=0) Length = 228 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 126 DPTTPSFYHIA*AEAASLFCSLRELILSSGE 34 DPT FYH A E F S+R+L + +G+ Sbjct: 33 DPTIEDFYHTAGTEQ---FASMRDLYIKNGQ 60 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,842,483 Number of Sequences: 59808 Number of extensions: 363380 Number of successful extensions: 785 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 759 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 784 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1434459094 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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