Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_N12
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 58 5e-09
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 58 5e-09
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 54 1e-07
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 49 4e-06
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 48 5e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 48 9e-06
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 47 1e-05
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 46 3e-05
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 44 8e-05
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 44 1e-04
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 43 2e-04
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 42 6e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 32 0.46
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 31 1.1
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 29 3.3
SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 7.5
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 27 9.9
SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 86.6 bits (205), Expect = 2e-17
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 356 GTLDTDWDQVVETFDDMNLKEXLLRGIYAYGFEKPSAIQQRAIMPCIQ 499
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQ 99
Score = 77.4 bits (182), Expect = 9e-15
Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 6/53 (11%)
Frame = +3
Query: 504 RDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTRELAQQI 644
RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++ CQAL+LAPTRELAQQI
Sbjct: 123 RDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQI 175
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 83.0 bits (196), Expect = 2e-16
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = +3
Query: 501 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 644
GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE QAL+L+PTRELA QI
Sbjct: 34 GRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRELANQI 81
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2
Query: 446 GFEKPSAIQQRAIMPCIQ 499
GFEKPSAIQQRAI P ++
Sbjct: 16 GFEKPSAIQQRAIKPILK 33
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 641
+A GRD++A+A++GTGKTA + + +L++ DT+ QAL+L PTRELA Q
Sbjct: 80 VALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQ 130
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 395 FDDMNLKEXLLRGIYAYGFEKPSAIQQRAI 484
F+D LK LL GI+ GF+KPS IQ+ +I
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESI 78
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 641
+A GRD++A+A++GTGKTA + + +L++ DT+ QAL+L PTRELA Q
Sbjct: 80 VALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQ 130
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 395 FDDMNLKEXLLRGIYAYGFEKPSAIQQRAI 484
F+D LK LL GI+ GF+KPS IQ+ +I
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESI 78
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 644
L G D+IAQA+SGTGKT FS+ L+ + T Q +IL PTRE+A Q+
Sbjct: 46 LGRCGLDLIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTREIAVQV 97
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 395 FDDMNLKEXLLRGIYAYGFEKPSAIQQRAI 484
F + L LLRG+ GFEKPS IQ +AI
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAI 44
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQ 641
L G+DV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q
Sbjct: 314 LVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTAKVGIRALILSPTRELALQ 366
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +3
Query: 492 ASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 644
A G D+I QA+SG GKTA F ++ LQQ++ + L++ TRELA QI
Sbjct: 81 AILGMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQI 131
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 395 FDDMNLKEXLLRGIYAYGFEKPSAIQQRAIMPCI 496
F D LK LLR I GFE PS +Q I I
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 82
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +3
Query: 492 ASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 644
A G D+I QA+SG GKTA F ++ LQQ++ + L++ TRELA QI
Sbjct: 81 AILGMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQI 131
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +2
Query: 395 FDDMNLKEXLLRGIYAYGFEKPSAIQQRAIMPCI 496
F D LK LLR I GFE PS +Q I I
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAI 82
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 641
LA ++IAQ+QSGTGKTA F +++L ++D + Q + L+PT ELA+Q
Sbjct: 138 LADPPVNMIAQSQSGTGKTAAFVLTMLSRVDATKPYPQVICLSPTYELARQ 188
Score = 35.1 bits (77), Expect = 0.050
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 389 ETFDDMNLKEXLLRGIYAYGFEKPSAIQQRAI 484
++F+++ L L RG+Y GF KPS IQ+ A+
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETAL 134
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +3
Query: 504 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 644
+DVI A++G+GKT F++ ILQ + + + ALIL PTRELA QI
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNPQRLFALILTPTRELAFQI 48
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +3
Query: 501 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 644
GRD I A++G+GKTA F++ ILQ++ A++L PTRELA QI
Sbjct: 44 GRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQI 91
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/54 (42%), Positives = 39/54 (72%), Gaps = 6/54 (11%)
Frame = +3
Query: 501 GRDVIAQAQSGTGKTATFSISILQQI-DTSI-----RECQALILAPTRELAQQI 644
G DVI QA++GTGKT +F++ +++++ D + R + L++APTRELA+Q+
Sbjct: 110 GEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPTRELAQQI 644
+ GRD++A AQ+G+GKTA + + +L Q ++ R AL +APTRELA+QI
Sbjct: 512 IVMAGRDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQI 568
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISILQ----QIDTSIRECQALILAPTRELAQQ 641
+A GRDV+ A++G+GKT F I I++ Q TS+ AL+++PTRELA Q
Sbjct: 83 VALSGRDVLGAAKTGSGKTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQ 137
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQ 641
+A G+DV A A +GTGKTA F + IL+++ T + L++ PTRELA Q
Sbjct: 43 VALMGKDVCACAATGTGKTAAFMLPILERLLYRPTQSPAIRVLVITPTRELAIQ 96
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 9/57 (15%)
Frame = +3
Query: 501 GRDVIAQAQSGTGKTATFSISILQQI------DTSIREC---QALILAPTRELAQQI 644
GRDV+A AQ+G+GKTA F + ++ + +S E QA+ +APTRELA QI
Sbjct: 748 GRDVMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQI 804
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 9/56 (16%)
Frame = +3
Query: 504 RDVIAQAQSGTGKTATFSISIL---------QQIDTSIRECQALILAPTRELAQQI 644
RD+I A++G+GKTA F+I +L ++ + + + ALILAPTRELAQQI
Sbjct: 139 RDIIGVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQI 194
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +3
Query: 489 LASXGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQQI 644
+A GRD+I A++G+GKTA F + I+ Q + + + LI APTREL QQI
Sbjct: 550 IALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQI 606
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Frame = +3
Query: 486 CLASXGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQI 644
C+ S GRD+I A++G+GKT +S+ + + T ALIL PTREL QQ+
Sbjct: 105 CVMS-GRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 35.5 bits (78), Expect = 0.038
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 19/66 (28%)
Frame = +3
Query: 504 RDVIAQAQSGTGKTATFSISILQQIDT--------------SIRECQ-----ALILAPTR 626
RD+I A++G+GKT F I I+Q I+ S E Q ALI+APTR
Sbjct: 169 RDIIGAAETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTR 228
Query: 627 ELAQQI 644
ELA Q+
Sbjct: 229 ELALQV 234
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +3
Query: 501 GRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQ 641
GRD++ A++G+GKT F + +L ++ R +I++PTREL+ Q
Sbjct: 609 GRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGVIIISPTRELSLQ 659
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 504 RDVIAQAQSGTGKTATFSISILQQI 578
RD++A AQ+G+GKTA F I IL +I
Sbjct: 913 RDLMACAQTGSGKTAAFLIPILSRI 937
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +2
Query: 395 FDDMNLKEXLLRGIYAYGFEKPSAIQQRAIMPCIQXTR 508
F+D++L E LL + G++KP+ +Q+ AI P ++ R
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKR 913
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 588 IRECQALILAPTRELAQQI 644
+RE QAL+L+PTRELA QI
Sbjct: 1 LREPQALVLSPTRELANQI 19
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +3
Query: 504 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 644
+ ++ ++++GTGK+ F +L + R +I+ PTRELA Q+
Sbjct: 198 KSLLIKSETGTGKSLVF---LLPSVQDPGRGYGTIIVVPTRELASQM 241
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 248 NMSYSSERRSXDWPEDSKNGPSKDQGSYDGP 340
+M Y SER P D P+ D GS D P
Sbjct: 1171 SMEYDSERHPYQAPADEMVNPNTDGGSRDNP 1201
>SB_33720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 266 ERRSXDWPEDSKNGPSKDQGSYD---GPPGMDPGTLDTDWDQVVETFDDMNLKEXLLRGI 436
E+ + + E +K + D+G GPPG GT D VVE DD K G
Sbjct: 19 EKTAEEMRELAKKAEACDRGVRAILLGPPGSGKGTQLVSDDLVVELIDDNLTKPECQNGW 78
Query: 437 YAYGFEKPSA 466
GF + A
Sbjct: 79 LLDGFPRTVA 88
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -1
Query: 442 GVYASQQXFFEVHVIEGFDNLIPVGVKC 359
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 305 GPSKDQG-SYDGPPGMDPGTLDTDW-DQVVETFDDMNLKEXL 424
GP +QG S GPPG PG T W D +V +L E L
Sbjct: 3363 GPKGEQGRSISGPPG-PPGAPGTSWNDSIVNGGLSNSLLESL 3403
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 501 GRDVIAQAQSGTGKTATFSISILQQIDTSIRE 596
G DV+A + SGT K + F ++++ D+ R+
Sbjct: 247 GSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_44173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 290 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMN 409
+D N + D G+ D D GT+D D D V+ DD N
Sbjct: 71 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDN 107
>SB_30467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 290 EDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQVVETFDDMN 409
+D N + D G+ D D GT+D D D V+ DD N
Sbjct: 54 DDDGNIDNDDDGNIDND---DDGTIDNDDDGYVDNVDDDN 90
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,097,022
Number of Sequences: 59808
Number of extensions: 352852
Number of successful extensions: 1564
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1553
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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