Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N11
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid...   158   2e-38
AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid...   158   2e-38
AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid...   158   2e-38
BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid...   157   4e-38
AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens ...   157   4e-38

>BC000008-1|AAH00008.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  158 bits (383), Expect = 2e-38
 Identities = 74/133 (55%), Positives = 89/133 (66%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGXKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRXLFXYAQEVGILFTASAMDMVSFDFL 547
            +K LERPY + +SWGKTYGEHK HLEFS  QYR L  YA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSG 586
             L VPF K+GSG
Sbjct: 123 HELNVPFFKVGSG 135


>AL137073-4|CAI13886.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  158 bits (383), Expect = 2e-38
 Identities = 74/133 (55%), Positives = 89/133 (66%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGXKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRXLFXYAQEVGILFTASAMDMVSFDFL 547
            +K LERPY + +SWGKTYGEHK HLEFS  QYR L  YA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSG 586
             L VPF K+GSG
Sbjct: 123 HELNVPFFKVGSG 135


>AF257466-1|AAF75261.1|  359|Homo sapiens N-acetylneuraminic acid
           phosphate synthase protein.
          Length = 359

 Score =  158 bits (383), Expect = 2e-38
 Identities = 74/133 (55%), Positives = 89/133 (66%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGXKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRXLFXYAQEVGILFTASAMDMVSFDFL 547
            +K LERPY + +SWGKTYGEHK HLEFS  QYR L  YA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALERPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSG 586
             L VPF K+GSG
Sbjct: 123 HELNVPFFKVGSG 135


>BC019315-1|AAH19315.1|  359|Homo sapiens N-acetylneuraminic acid
           synthase (sialic acid synthase) protein.
          Length = 359

 Score =  157 bits (380), Expect = 4e-38
 Identities = 73/133 (54%), Positives = 89/133 (66%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGXKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRXLFXYAQEVGILFTASAMDMVSFDFL 547
            +K L+RPY + +SWGKTYGEHK HLEFS  QYR L  YA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSG 586
             L VPF K+GSG
Sbjct: 123 HELNVPFFKVGSG 135


>AK001659-1|BAA91818.1|  359|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10797 fis, clone NT2RP4000657, weakly similar to
           SPORE COAT POLYSACCHARIDE BIOSYNTHESIS PROTEIN SPSE. ).
          Length = 359

 Score =  157 bits (380), Expect = 4e-38
 Identities = 73/133 (54%), Positives = 89/133 (66%)
 Frame = +2

Query: 188 VEVKITDDIRIGGNNPCFIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGXKF 367
           +E+++     +GG +PCFIIAE GQNHQGD              GA C KFQK+ L  KF
Sbjct: 3   LELELCPGRWVGGQHPCFIIAEIGQNHQGDLDVAKRMIRMAKECGADCAKFQKSELEFKF 62

Query: 368 TKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRXLFXYAQEVGILFTASAMDMVSFDFL 547
            +K L+RPY + +SWGKTYGEHK HLEFS  QYR L  YA+EVGI FTAS MD ++ +FL
Sbjct: 63  NRKALDRPYTSKHSWGKTYGEHKRHLEFSHDQYRELQRYAEEVGIFFTASGMDEMAVEFL 122

Query: 548 VNLKVPFIKIGSG 586
             L VPF K+GSG
Sbjct: 123 HELNVPFFKVGSG 135


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,044,584
Number of Sequences: 237096
Number of extensions: 1588090
Number of successful extensions: 2725
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2725
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)