Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N11
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synth...   123   2e-28
AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA...   123   2e-28
AY089278-1|AAL90016.1|  270|Drosophila melanogaster AT07769p pro...    29   5.5  
AE014296-2930|AAF49326.2|  270|Drosophila melanogaster CG7542-PA...    29   5.5  

>AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synthase
           protein.
          Length = 372

 Score =  123 bits (296), Expect = 2e-28
 Identities = 63/125 (50%), Positives = 76/125 (60%)
 Frame = +2

Query: 239 FIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGXKFTKKYLERPYDNPNSWGK 418
           +IIAE GQNHQG               G  CVKFQK+ L  KFT+  L+R Y + ++WGK
Sbjct: 16  YIIAEIGQNHQGCVETAKKMIWEAKKAGCHCVKFQKSDLPAKFTRSALDREYISDHAWGK 75

Query: 419 TYGEHKSHLEFSDTQYRXLFXYAQEVGILFTASAMDMVSFDFLVNLKVPFIKIGSGGLEQ 598
           TYGEHK +LEFS  QY  L  + +E+ + FTASAMD  S +FL  L VPFIKIGSG    
Sbjct: 76  TYGEHKEYLEFSKDQYLQLQAHCKELNVDFTASAMDERSLEFLSALNVPFIKIGSGDANN 135

Query: 599 LALPK 613
             L K
Sbjct: 136 FPLLK 140



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 573 KSAQGDSNNLLFLKYAASKKIPLIIS 650
           K   GD+NN   LK AA+  +PL+IS
Sbjct: 127 KIGSGDANNFPLLKKAANLNLPLVIS 152


>AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA
           protein.
          Length = 372

 Score =  123 bits (296), Expect = 2e-28
 Identities = 63/125 (50%), Positives = 76/125 (60%)
 Frame = +2

Query: 239 FIIAEAGQNHQGDXXXXXXXXXXXXXXGASCVKFQKTCLGXKFTKKYLERPYDNPNSWGK 418
           +IIAE GQNHQG               G  CVKFQK+ L  KFT+  L+R Y + ++WGK
Sbjct: 16  YIIAEIGQNHQGCVETAKKMIWEAKKAGCHCVKFQKSDLPAKFTRSALDREYISDHAWGK 75

Query: 419 TYGEHKSHLEFSDTQYRXLFXYAQEVGILFTASAMDMVSFDFLVNLKVPFIKIGSGGLEQ 598
           TYGEHK +LEFS  QY  L  + +E+ + FTASAMD  S +FL  L VPFIKIGSG    
Sbjct: 76  TYGEHKEYLEFSKDQYLQLQAHCKELNVDFTASAMDERSLEFLSALNVPFIKIGSGDANN 135

Query: 599 LALPK 613
             L K
Sbjct: 136 FPLLK 140



 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 573 KSAQGDSNNLLFLKYAASKKIPLIIS 650
           K   GD+NN   LK AA+  +PL+IS
Sbjct: 127 KIGSGDANNFPLLKKAANLNLPLVIS 152


>AY089278-1|AAL90016.1|  270|Drosophila melanogaster AT07769p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 464 IVYRRIPNDFCVLRTSFPTSLGCRKAFLDIFL*IS 360
           +VY++  + + +  TSF TS+GC+  F  +F  IS
Sbjct: 220 LVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRIS 254


>AE014296-2930|AAF49326.2|  270|Drosophila melanogaster CG7542-PA
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 464 IVYRRIPNDFCVLRTSFPTSLGCRKAFLDIFL*IS 360
           +VY++  + + +  TSF TS+GC+  F  +F  IS
Sbjct: 220 LVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRIS 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,411,176
Number of Sequences: 53049
Number of extensions: 517637
Number of successful extensions: 1156
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)