Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N11
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode ast...    29   3.8  
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    28   5.0  
Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode
           astacin protease protein32 protein.
          Length = 651

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/77 (24%), Positives = 42/77 (54%)
 Frame = +1

Query: 232 SVFYNSGSGTESPR*HRDRKKINKSC*GSWS*LREVSKDMSRXEIYKKISRKALRQPKLV 411
           +V  ++ + T SPR ++ + +  KS   +   LR V  +  + ++ KK+ +K ++ PK+ 
Sbjct: 82  TVTTSTSAPTTSPRVYKLKSEARKSLRKA---LRGVPPEKRKKQL-KKMGKKMMKIPKIT 137

Query: 412 GKDVRRTQKSFGILRYT 462
            K+  +  KS+  ++ T
Sbjct: 138 KKESNKLHKSYRKVKIT 154


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -2

Query: 181 ERSIKTNKLKPISSSTGWLGSMFTLCNKGLSTSRSRSKLDK*GQLCTCTSERFVARP 11
           E   K NK   +       G +++   K    S +RS     G++C CTS  FV +P
Sbjct: 261 EDGAKLNKKVSLEMGGKNPGIVYSNYRKSDIASIARSSFLNQGEICLCTSRLFVQKP 317


>Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical
           protein W02B8.4 protein.
          Length = 733

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = -3

Query: 327 LAPASLAAFINFFAISMSPW*FCPASAIIKHGLLPPILMSSVILTSTILS 178
           L+P  L  F+ F  I +SP    P   I+  G+L P ++S ++L   ILS
Sbjct: 612 LSPVVLTPFL-FAPIVLSPLALVPV--ILSPGILNPFILSPLVLCPFILS 658


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,170,915
Number of Sequences: 27780
Number of extensions: 274989
Number of successful extensions: 575
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 575
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)