Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_N06
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 262 5e-69
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 254 1e-66
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 218 1e-55
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 195 9e-49
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 169 5e-41
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 163 2e-39
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 163 4e-39
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 116 3e-37
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 151 1e-35
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 145 9e-34
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 130 2e-29
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 129 5e-29
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 111 2e-23
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 99 8e-20
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 94 2e-18
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 87 3e-16
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 87 3e-16
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 82 1e-14
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 81 2e-14
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 77 3e-13
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 77 3e-13
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 77 5e-13
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 76 6e-13
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 70 4e-11
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 70 6e-11
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 69 7e-11
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 68 2e-10
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 68 2e-10
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 68 2e-10
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 60 5e-08
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 60 5e-08
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 58 1e-07
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 58 1e-07
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 56 6e-07
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 52 9e-06
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 50 4e-05
UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1; Arabido... 47 5e-04
UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large rib... 44 0.003
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 41 0.030
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 40 0.069
UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33; Bacter... 39 0.12
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 38 0.16
UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowie... 38 0.21
UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42; Lactob... 38 0.28
UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17; Bacter... 36 0.64
UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59; Bacter... 36 1.1
UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondria... 35 2.0
UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,... 34 2.6
UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1; Cyanidi... 34 3.4
UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candida... 33 6.0
UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13; ... 33 6.0
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 262 bits (642), Expect = 5e-69
Identities = 115/200 (57%), Positives = 148/200 (74%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
L + +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+ NK+K +++LRKR
Sbjct: 4 LTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKR 63
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXP 396
CNVNPARGPFHF APS I +K VRGMIPHKT RG+ AL RLR +DG P P+D P
Sbjct: 64 CNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVP 123
Query: 397 AALRVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDA 576
A+RV L+ R YC VGRLSHE+GW Y+DV++ LE RK + + ++LK++T A
Sbjct: 124 IAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKA 183
Query: 577 GEKVSKATTPFTTIIQSYGY 636
E ++KA PF II+SYGY
Sbjct: 184 RENIAKAAEPFNKIIKSYGY 203
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 254 bits (623), Expect = 1e-66
Identities = 114/200 (57%), Positives = 143/200 (71%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
L+ K I+IDGRGHLLGRLA+VIAK +L G KVVVVRCE + +SG+FF NK+K +++LRKR
Sbjct: 4 LSEKPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKR 63
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXP 396
CNVNPARGPFHF APS +LWK VRGM+PHKT RG NAL RL+ Y+G P PFD P
Sbjct: 64 CNVNPARGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIPSPFDRQKRLCVP 123
Query: 397 AALRVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDA 576
A+R CL+P R +C VGR++HE+GWKYRDVV LE RK + + KKLK++T A
Sbjct: 124 TAMRQLCLRPDRKFCDVGRVAHEVGWKYRDVVNNLEAKRKIKSRLSYLHSKKLKKLTWKA 183
Query: 577 GEKVSKATTPFTTIIQSYGY 636
V+ +++ YGY
Sbjct: 184 RTAVADKVKDQDAVLRKYGY 203
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 218 bits (532), Expect = 1e-55
Identities = 101/197 (51%), Positives = 131/197 (66%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K +V+D RGHLLGRLAA +AK LL G +VV VR E+INISG+ F NKLK +FL+KR N
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAAL 405
NP RGPFHF +P+ ILW+T+RGMIPHKT RG AL RL+ ++G PPP+D P AL
Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123
Query: 406 RVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDAGEK 585
RV LKPGR +C +GRL+ E+GW++ D+V +LE RK + A +K L + A
Sbjct: 124 RVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKTKSAAFYARKKTLVNLRAKAAVA 183
Query: 586 VSKATTPFTTIIQSYGY 636
V+ T + YG+
Sbjct: 184 VASKTANIQKELDHYGF 200
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 195 bits (475), Expect = 9e-49
Identities = 87/172 (50%), Positives = 118/172 (68%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
++ + IV+D R H+LGRL++++AK LL G +VVVVRCE+I +SG K+K + FLRKR
Sbjct: 7 ISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKR 66
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXP 396
N P+ GP HF APS ILW+T+RGMIPHKT RG AL RL+ Y+G PPP+D P
Sbjct: 67 MNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPPPYDKIKRMVIP 126
Query: 397 AALRVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKK 552
AL+V L+ G YC +G+LS E+GW + D +++LE RK A V YE++
Sbjct: 127 DALKVLRLQAGHKYCLLGKLSSEVGWNHYDTIKELEDKRKERA--QVTYERR 176
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 169 bits (411), Expect = 5e-41
Identities = 86/202 (42%), Positives = 118/202 (58%)
Frame = +1
Query: 31 RALATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLR 210
R + K +VID +GHLLGRLA+ +AK LL G ++VVVR E INISG+ F N++K FL
Sbjct: 71 RKMFDKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLN 130
Query: 211 KRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXX 390
K N NP RG HF APS I W+ VRGM+PHKT +G AL RL+ ++G P P+D
Sbjct: 131 KWMNHNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAALERLKIFEGIPTPYDRVKKQV 190
Query: 391 XPAALRVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITN 570
AL+V L+ R C +G LS +GW + ++ KLE R+ A ++KK+K+
Sbjct: 191 VVDALKVQRLRNSRPVCKLGDLSASVGWGKQTLIEKLEEKRRARA--KTYHDKKVKQADA 248
Query: 571 DAGEKVSKATTPFTTIIQSYGY 636
E + A + +GY
Sbjct: 249 RKKELAAPALKAIKDKLAQFGY 270
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 163 bits (397), Expect = 2e-39
Identities = 78/197 (39%), Positives = 112/197 (56%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K IVID +GHL GRLA++++K LL+G VVVVR E I +SG ++ + KR N
Sbjct: 3 KVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMNT 62
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAAL 405
NP +GP+H+ +PS + WKTVRGM+PHKT RG A R + Y+G P P+D P AL
Sbjct: 63 NPKKGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVKRAVVPEAL 122
Query: 406 RVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDAGEK 585
+V L G +C +G +IGWK+ +V++LE R+ A A +K+ A
Sbjct: 123 KVLRLGEGHRFCVLGDFCEQIGWKHGAIVKELEAKRQTAASEYWAQKKEANSKFAAAKAA 182
Query: 586 VSKATTPFTTIIQSYGY 636
+ +I++ GY
Sbjct: 183 ANAQLGDLQQLIEATGY 199
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 163 bits (395), Expect = 4e-39
Identities = 76/154 (49%), Positives = 102/154 (66%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
IVID +GH+LGRL+A++AK LL G++V +VRCE+ ISG F K + + KR N N
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNH 63
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRV 411
RGPFHF AP+ I+ +T+RGMIP+KT RG +A+ RLR YDG PP P+A+
Sbjct: 64 LRGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPPCCARYKRVVCPSAMAY 123
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXR 513
CL+P R C VGR++HEIGW++ V + E R
Sbjct: 124 LCLRPERRRCEVGRVAHEIGWQHAADVERYEKRR 157
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 116 bits (278), Expect(2) = 3e-37
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+ NKLK ++FL K+ N
Sbjct: 5 QVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNT 63
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKT 309
NP+RGP+ F APS I W T RGM+PHKT
Sbjct: 64 NPSRGPYRFQAPSRIFWWTARGMLPHKT 91
Score = 62.5 bits (145), Expect(2) = 3e-37
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +1
Query: 403 LRVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDAGE 582
L+V LKP R + ++GRL+H++GWKY+ V LE RK A +K+L R+ A +
Sbjct: 93 LKVVRLKPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKAKIHYWKKKQLMRLWKQAKK 152
Query: 583 KVSKATTPFTTIIQSYG 633
V K T +T ++++G
Sbjct: 153 NVEKKTDKYTEFLKTHG 169
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 151 bits (367), Expect = 1e-35
Identities = 82/197 (41%), Positives = 108/197 (54%), Gaps = 2/197 (1%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
IVID + H+LGR AAV+AK LL G K+ VVRCEQ+NI+G NK+K + +LRKR NP
Sbjct: 25 IVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNP 84
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPP-PFDNXXXXXXPAALR 408
+GPFH APS + +TVR M+P T RG AL L Y+G PP P A R
Sbjct: 85 TKGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAYEGIPPNVVRTGGRVVIPRAQR 144
Query: 409 VFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDA-GEK 585
C + R Y +G + +GWKY DVV LE R A + KL+ A E
Sbjct: 145 HVCYRSERPYTVLGNMCKHVGWKYSDVVANLEKARVEKASRHHEKQAKLRDAWKSARKEA 204
Query: 586 VSKATTPFTTIIQSYGY 636
++K +++ +GY
Sbjct: 205 LAKMPKHNVEVLKKFGY 221
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 145 bits (351), Expect = 9e-34
Identities = 79/181 (43%), Positives = 102/181 (56%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
IVID +GH+ GRLAA +AK LL+G KVVVVRCE+I ++G FL K N NP
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNP 64
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRV 411
GPFH AP I + VRGMIP+KT RG +A L+ Y+G P + + P ALR
Sbjct: 65 RDGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIPAKYVSYKRLVIPHALRC 124
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDAGEKVS 591
+ R +GRLS +GWKY +VV +LE RK + +K + A EKV+
Sbjct: 125 VSIHTDRPTTKLGRLSTTMGWKYGNVVAQLEEQRKAESAKYFEAKKAAQDKRAAAIEKVN 184
Query: 592 K 594
K
Sbjct: 185 K 185
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 130 bits (315), Expect = 2e-29
Identities = 61/172 (35%), Positives = 98/172 (56%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K V+D + HLLGR+A++ AK +L+G+K++++R E +I+G N K S +K+ N
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNT 61
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAAL 405
NP RGPFHF +PS IL++T++ MIPHKT RG AL L+ ++G P F A
Sbjct: 62 NPRRGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGLPRIFSKIKKEKFFEAF 121
Query: 406 RVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKR 561
R +K R ++G++ +GWK R + + + +K++K+
Sbjct: 122 RYKVIKNYRKTVNLGKVCEVLGWKNRKFIEQKSDQLAALGKVVLKKKKEIKK 173
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 129 bits (312), Expect = 5e-29
Identities = 75/186 (40%), Positives = 98/186 (52%), Gaps = 2/186 (1%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+V+D R H+L RLA++IAK LL G +VV R N P
Sbjct: 12 VVVDARHHMLSRLASIIAKELLNGKRVV--------------------------RMNTKP 45
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRV 411
+ GP HF +P+ ILW+TVRGMIPHKT RG+ AL RL+ Y+ PP+D P AL+V
Sbjct: 46 SHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPDALKV 105
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDAG--EK 585
L+PG YC +G+LS E+GW Y D +R G LK + AG E+
Sbjct: 106 LRLQPGHKYCLLGQLSKEVGWNYYDTIRICVLCIGGGCCDEDIMLPLLKALRTLAGRIEQ 165
Query: 586 VSKATT 603
+ KATT
Sbjct: 166 IIKATT 171
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 111 bits (266), Expect = 2e-23
Identities = 59/150 (39%), Positives = 80/150 (53%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
++ID G + G+LAA +AK+LLEG +V VV E+ G+ K +L KRC VNP
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNP 66
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRV 411
RGPFHF P L K +R MI +K RGK A+ RL TY+G P + A
Sbjct: 67 RRGPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIPRELEGQPRYKVTCAFVK 126
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVRKL 501
+ P R Y +G+L GWK+ + + L
Sbjct: 127 YTGNPNR-YVTLGKLLSMFGWKHAEAAKSL 155
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 99.1 bits (236), Expect = 8e-20
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +1
Query: 406 RVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDAGEK 585
R+ CLKPGR YCHVGRLSHE+GWKY+ V+ LE R+ +K+KR+T A +K
Sbjct: 1 RIMCLKPGRKYCHVGRLSHEVGWKYQKVIESLEHKRQVKVAIKARKHRKMKRLTKKASKK 60
Query: 586 VSKATTPFTTIIQSYGY 636
+ K P+T +I+SYGY
Sbjct: 61 IEKQVAPYTAVIKSYGY 77
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 94.3 bits (224), Expect = 2e-18
Identities = 48/140 (34%), Positives = 73/140 (52%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPA 234
++D H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG + + FL+ ++P
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 235 RGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRVF 414
GP+H P I+ + +RGM+P K GK A RLR Y G P + A
Sbjct: 61 HGPYHPRRPDTIMTRMIRGMLPRKKPSGKAAHSRLRAYIGSPGHLKSFEKRKLKGA---E 117
Query: 415 CLKPGRNYCHVGRLSHEIGW 474
+P NY + L +GW
Sbjct: 118 ITRPTANYTTMADLGETVGW 137
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 87.4 bits (207), Expect = 3e-16
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ IV+D H+ GRL++ +AK+L +G++V +V CE+I SG + FL +
Sbjct: 12 RPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINSII 71
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPH-KTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAA 402
NP GP H+ P I+ K +R M+P+ + GK ++ RLR Y G P + A
Sbjct: 72 NPKHGPVHYRRPDTIITKMIRQMLPYDRKPSGKESIKRLRAYIGSPKELKSLEKIQFEKA 131
Query: 403 LRVFCLKPGRNYCHVGRLSHEIGW 474
K NY +G L IGW
Sbjct: 132 K---IKKSPSNYTTMGELCRVIGW 152
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 87.4 bits (207), Expect = 3e-16
Identities = 52/142 (36%), Positives = 75/142 (52%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPA 234
+I+ G +LGRLA+ +AK+LLEG +VV+V E+ I+GN K R NP
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62
Query: 235 RGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRVF 414
RGPF+ I+ +T+RGM+P KT RG+ A RL+ Y G P F + A
Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEAHVSR 122
Query: 415 CLKPGRNYCHVGRLSHEIGWKY 480
+P Y VG ++ +G K+
Sbjct: 123 LSRP--KYVTVGEVAKFLGGKF 142
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 81.8 bits (193), Expect = 1e-14
Identities = 50/141 (35%), Positives = 74/141 (52%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPA 234
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G N +K +L+K +P
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPK 73
Query: 235 RGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRVF 414
+GPF+ P I + VRGM+P KT RG+ A RLR Y G P + A
Sbjct: 74 KGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKRLRAYIGTPRWVEEANIEPERVAEADM 133
Query: 415 CLKPGRNYCHVGRLSHEIGWK 477
Y +G LS E+G++
Sbjct: 134 SRLGHLWYVTLGELSEELGYQ 154
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 81.0 bits (191), Expect = 2e-14
Identities = 49/122 (40%), Positives = 70/122 (57%), Gaps = 2/122 (1%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLK-LMSFLRKRCN 222
+AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G K L ++ +
Sbjct: 6 EAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRWVEWKTY 65
Query: 223 VNP-ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPA 399
NP RGP + P + + VRGM+P + G+++L RL Y G P + N
Sbjct: 66 YNPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGRDSLKRLTVYVGLPDEYRNAKLVKVEE 125
Query: 400 AL 405
AL
Sbjct: 126 AL 127
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 77.4 bits (182), Expect = 3e-13
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+ L + R
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS---RAATLREYRETRDRGAT 59
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRV 411
GP+ P IL +T+RGM+P+K RG++A+ RL+ Y G P++ A
Sbjct: 60 EFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIADAD 117
Query: 412 FCLKPGRNYCHVGRLSHEIGWKY 480
L Y +G +S ++G K+
Sbjct: 118 MRLLSSNKYVELGEVSQKMGSKF 140
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/110 (38%), Positives = 63/110 (57%)
Frame = +1
Query: 31 RALATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLR 210
+ L VID GH+LGRL++ IAK LL G ++VVV E+ I+G+ + + +
Sbjct: 10 KTLGDDFTVIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKY---MVFERYKE 66
Query: 211 KRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCP 360
K + +GP+ P I +TVRGM+P K+ RG++A RLR + G P
Sbjct: 67 KYDRGSKEKGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 76.6 bits (180), Expect = 5e-13
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN-FFTNKLKLMSFLRKRCN 222
+ IV+DG G ++GRLA+V+AK+LL G +V VV E+I +SG+ + + L + +
Sbjct: 9 REIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGDPRMVVESYRTTVLGVKSH 68
Query: 223 VNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAA 402
+ P P + VRGM+P RG+ AL RLR Y G P P A
Sbjct: 69 FSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVPDELKGREFVRFPEA 128
Query: 403 LRVFCLKPGRNYCHVGRLSHEIGWK 477
+ +Y +G ++ ++GWK
Sbjct: 129 ---DASRLSSHYIELGAVARQLGWK 150
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 76.2 bits (179), Expect = 6e-13
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K VID GH+LGR+A+V+AK LL G K+V+VRCE + + G ++ + RKR N
Sbjct: 10 KVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRVNT 69
Query: 226 NPARGPFHFXAPSXILWK 279
NP RG FH +P+ ++ K
Sbjct: 70 NPTRGAFHHRSPAEMVRK 87
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 1/147 (0%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K IVIDGR L+GRLA+ I +L +G + V+RC+ + SG + +++ +
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRT 62
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXR-LRTYDGCPPPFDNXXXXXXPAA 402
NP +GP+ F PS +L K V+GM+ +K + L + + ++ P + +
Sbjct: 63 NPNKGPYFFSNPSSLLKKIVKGML-NKLNKSHTLLFKSVECFNDTPNRYIYNYKLFLKNS 121
Query: 403 LRVFCLKPGRNYCHVGRLSHEIGWKYR 483
+ + LKP + + + + GW+ R
Sbjct: 122 HKNYKLKPDSKFTKLYEILPKFGWQDR 148
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/103 (35%), Positives = 61/103 (59%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
++ D G +LGRLA+++A+ L G +V +V E+ I+G+ N +K +L+K +
Sbjct: 7 LIYDAEGLVLGRLASIVARNLKRGYRVKIVNAEKAIITGD--PNMVK-KEWLQKVKRGDY 63
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCP 360
+GPF+ P IL + +RGM+P KT RG+ L ++ Y G P
Sbjct: 64 YKGPFYPKRPDNILKRVIRGMLPRKTARGRELLKNVKVYIGVP 106
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 69.3 bits (162), Expect = 7e-11
Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLE--GNKVVVVRCEQINISGNFFTNKLKLMSFLRK---- 213
+++D GH+ GRLA IAK LLE ++VVV E++ I+G+ K+ + F RK
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD---EKMVIEWFKRKISEW 75
Query: 214 RCNVNPAR-GPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCP 360
R + NP + GP P + + VRGM+P K+ G++AL RLR Y P
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRIVRGMLPKKSETGRSALKRLRVYMSIP 125
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/103 (33%), Positives = 57/103 (55%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+V+D R +LGR+++ +A+ +L+G V VV E+ I+GN + M R +
Sbjct: 10 VVVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITGN----EEATMETYHTRAELGS 65
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCP 360
GP++ P I + +RGM+P+KT G+ AL +R Y G P
Sbjct: 66 DSGPYYPKRPDRIFKRAIRGMLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 67.7 bits (158), Expect = 2e-10
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG--NFFTNKLKLMSFLRKRC 219
+ ++I+ G +LGR+A+ + ++L EG KV++V E+ ISG N KL+ L +
Sbjct: 8 QVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLL--LTVKT 65
Query: 220 NVNPAR-GPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXP 396
NP R G +P I+ +T+RGM+P K+ +G+ L ++ Y G P F+ P
Sbjct: 66 LFNPYRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFP 124
Query: 397 AALRVFCLKPGRNYCHVGRLSHEIGW 474
+ V LK G+ Y V +S E+GW
Sbjct: 125 DS-DVSRLK-GK-YVTVEVVSKELGW 147
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 67.7 bits (158), Expect = 2e-10
Identities = 34/103 (33%), Positives = 58/103 (56%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+++D R ++GR+A+ +A+ L+G V VV E+ I+G + +++ KR ++
Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGR----EEQIVEKYEKRVDIGN 65
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCP 360
G F+ P I +T+RGM+PHK RG+ A +R Y G P
Sbjct: 66 DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNP 108
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +1
Query: 76 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPARGPFHF 252
+LGRLA+++AK L + +VRCE+I ISG K+K M FLR+R N P+ GP F
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 60.1 bits (139), Expect = 5e-08
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+V++ ++GRLA+ +AK+ L G ++ VV E+ ++GN K + ++ NP
Sbjct: 2 VVVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNP 61
Query: 232 AR-GPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCP 360
+ GP + P I+ + +RGM+P+K RG A +++ G P
Sbjct: 62 KKMGPKYPRRPDDIVRRVIRGMLPYKKPRGVEAFKKIKIEVGVP 105
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 313 RGKNALXRLRTYDGCPPPFDNXXXXXXPAALRVFCLKPGRNYCHVGRLSHE 465
RG+ AL RL+ Y+G PPP+D P AL+V L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/143 (25%), Positives = 63/143 (44%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
I ID H+ GRL++ +AK LL G + +V ++ I+G + + F R +
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITGR---KEFIIDKFNNLRNTGSI 58
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDNXXXXXXPAALRV 411
+GP++ IL +++ M+P K G AL R Y P +N +A+
Sbjct: 59 RKGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLENKNFERIESAMN- 117
Query: 412 FCLKPGRNYCHVGRLSHEIGWKY 480
K + +G +S +G Y
Sbjct: 118 ---KKVTGFITLGEISKILGETY 137
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 56.4 bits (130), Expect = 6e-07
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLL----EGN--KVVVVRCEQINISGNFFTNKLKLMSFLRK 213
+V D +LGRLA+ IAK LL EG+ +V+++ E ++G K ++++ +
Sbjct: 7 LVFDAHDKVLGRLASHIAKTLLVTRREGDPKRVIIINAEMAIVTGP----KDRILADYDR 62
Query: 214 RCNVN-PARGPFHFXAPSXILWKTVRGMIPH-KTXRGKNALXRLRTYDGCP 360
+ +N P +GPF P IL +TVRGM+P+ K G+ A+ LR G P
Sbjct: 63 KYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQKKSSGRQAVKDLRVMIGTP 113
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 52.4 bits (120), Expect = 9e-06
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFL-RKRCNVN 228
+++D +LGR++ IAK+L G KV VV E+ ISG + L+ S L + N
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGP-RSRVLEGYSLLFTVKTMQN 66
Query: 229 PAR-GPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCP 360
P R G P I+ +TVRGM+P K GK L+ Y G P
Sbjct: 67 PYRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIP 110
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 50.4 bits (115), Expect = 4e-05
Identities = 29/103 (28%), Positives = 44/103 (42%)
Frame = +1
Query: 196 MSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPPFDN 375
+ + + NP+ GPF F P I TV+ ++P+K + L L+ +D +
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFDKTKQMIIS 65
Query: 376 XXXXXXPAALRVFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 504
A R CL G L++E GWKY+ V LE
Sbjct: 66 VQICVSEATSRFACL---------GYLTYESGWKYQVVTNTLE 99
>UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1;
Arabidopsis thaliana|Rep: 60S L13 ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 457 SHEIGWKYRDVVRKLEXXRKGXAVXXVAYEKKLKRITNDAGEKVSKATTPFTTIIQSYGY 636
+HE+GW+Y+ +V KLE RK +K ++ A EK T + +++ YGY
Sbjct: 1 AHEVGWQYQGIVEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKAKTAVYDKVLEQYGY 60
>UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large
ribosomal subunit; n=2; Ostreococcus|Rep: Plastid
ribosomal protein L13 large ribosomal subunit -
Ostreococcus lucimarinus CCE9901
Length = 218
Score = 44.0 bits (99), Expect = 0.003
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGN------------KVVVVRCEQINISGNFFTNKLKL 195
+VID G LGRL+ V A L GN VVV+ ++I ++GN KL
Sbjct: 75 VVIDAAGLRLGRLSTVAATYLRGGNSGCYTPAFNMGVNVVVINADKIVVTGNKANQKLYY 134
Query: 196 MSFLRKR--CNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPP 366
+R + H P+ ++ K ++GM+P K G+ L+ Y G P
Sbjct: 135 TLGVRGKPGSMKEETYASLHARQPARVIEKAIKGMLP-KNRMGRETFTHLKVYAGADHP 192
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 40.7 bits (91), Expect = 0.030
Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFTNKLKLM 198
++D LGRLA +A VL NK VVVV ++I +SGN KL
Sbjct: 18 LVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQKLYRR 77
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPP 366
R P I+ K ++GM+PH G+ +L+ Y G P
Sbjct: 78 HSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNAL-GRQLFRKLKVYRGPEHP 132
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 39.5 bits (88), Expect = 0.069
Identities = 29/110 (26%), Positives = 50/110 (45%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
+ATKA +I L+G+ + + + N V+++ Q+ I+GN T K+ +
Sbjct: 29 IATKAAII-----LMGKNRSTYSYNSMSANFVIIINSRQVAITGNKNTQKVYKRYSAKPG 83
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPP 366
+ P+ IL + V+GM+P K+ GK L+ Y G P
Sbjct: 84 ATKTESFYHLKKRIPNRILEQAVKGMLP-KSVLGKKMFSHLKVYAGDSHP 132
>UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33;
Bacteria|Rep: 50S ribosomal protein L13 - Bartonella
henselae (Rochalimaea henselae)
Length = 154
Score = 38.7 bits (86), Expect = 0.12
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNK- 186
K ++ID +LGRLAA +A L +G+ V+V+ ++I+++G +T+K
Sbjct: 14 KWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKISLTGKKYTDKK 73
Query: 187 ----LKLMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDG 354
+ ++KR G F P ++ K V MIP + G+ L LR Y G
Sbjct: 74 YYWHTGYIGGIKKRTARQILEGRF----PERVVEKAVERMIP-RGPLGRRQLKNLRVYAG 128
Query: 355 CPPP 366
P
Sbjct: 129 SQHP 132
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 38.3 bits (85), Expect = 0.16
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 12/116 (10%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNKLKLM 198
V+D LGRLA +A +L G+ VVVV E+I +SG KL
Sbjct: 18 VVDAENQTLGRLATEVASILRGKNNPNFTPHLDTGDFVVVVNAEKIQVSGKKPQQKLYRR 77
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPP 366
R P I+ K ++GM+PH G+ +L+ Y G P
Sbjct: 78 HSGRPGGMKVETFESLQERIPERIVEKAIKGMLPHNAL-GRQMYRKLKVYKGTEHP 132
>UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL13 - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 273
Score = 37.9 bits (84), Expect = 0.21
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNKL-K 192
IV+D + +LGRLA++ A +++ G VV++ +++ ++G +T+KL K
Sbjct: 127 IVLDAQDQILGRLASLAATLVMGKWHPLYHPAMNMGAHVVIINADKVRVTGRKYTDKLYK 186
Query: 193 LMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPP 366
R + A P I+ ++GM+P KT G+ +L Y G P
Sbjct: 187 RHVTGRPGSMKSEAFRDLQARIPERIVEVAIKGMLP-KTRLGREQFKQLHIYAGDENP 243
>UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42;
Lactobacillales|Rep: 50S ribosomal protein L13 -
Streptococcus mutans
Length = 148
Score = 37.5 bits (83), Expect = 0.28
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFTNKL 189
K ++D LGRL+AV+A VL NK V+V+ E++ ++G NK+
Sbjct: 16 KWYIVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKAANKI 75
Query: 190 KLMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDG 354
+ + G ++ K+V+GM+PH T G+ +L+ + G
Sbjct: 76 YYTHSMYPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNTL-GRAQGMKLKVFVG 129
>UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17;
Bacteria|Rep: 50S ribosomal protein L13 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 36.3 bits (80), Expect = 0.64
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFT 180
+A K V+D G LGRLA+ +A++L G+ VVV+ E+I I+G
Sbjct: 10 VARKWFVVDADGQTLGRLASRVARILSGKDNPKYTPFIDTGDHVVVINAEKIKITGLKAD 69
Query: 181 NKLKLMSFLRKRCNVNPARGPFHF-XAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGC 357
NK K + + P IL ++GM+P K+ GK +L+ Y G
Sbjct: 70 NK-KYYHYSGYPGGMKEEEFLKRLERRPELILETAIKGMLP-KSKLGKAMGGKLKVYRGA 127
Query: 358 PPP 366
P
Sbjct: 128 DHP 130
>UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59;
Bacteria|Rep: 50S ribosomal protein L13 -
Symbiobacterium thermophilum
Length = 143
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 12/119 (10%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVRCEQINISGNFFTNKL 189
K V+D G LGRLA+ +A +L G+ V++V E+I ++G T+K+
Sbjct: 15 KWYVVDAEGKTLGRLASKVAAILRGKHKPTFTPHVDCGDFVIIVNAEKIQVTGKKVTDKV 74
Query: 190 KLMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDGCPPP 366
P +L ++GM+PH G+ +L+ Y G P
Sbjct: 75 YYRHSGYPGGQKATTFEQMIARRPERVLELAIKGMLPHNRL-GRQMYRKLKVYAGPEHP 132
>UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondrial
precursor; n=12; Saccharomycetales|Rep: 54S ribosomal
protein L23, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 163
Score = 34.7 bits (76), Expect = 2.0
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 121 GNKVVVVRCEQINISGNFFTNKLKLMSFLRK-RCNVNPARGPFHFXAPSXILWKTVRGMI 297
G+ VVV C++I ++G F K R + + IL K V GM+
Sbjct: 54 GDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGML 113
Query: 298 PHKTXRGKNALXRLRTYDGCPPPF 369
P R K L RL+ +DG P+
Sbjct: 114 PKNKLR-KQRLDRLKVFDGSENPY 136
>UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG9186-PB, isoform B - Apis mellifera
Length = 309
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -1
Query: 330 KSILATLCFVW--DHASYSLP*NXRWSXKMERSTSRIHVAPLTQE*HKLEFVRKEVARDV 157
KS L T VW HA + P N S H + +TQ HK++F++K V DV
Sbjct: 56 KSKLPTEVPVWIISHAGHVQPPNNLAITMPSNSNWTEHYSLMTQVQHKIDFIKKYVPEDV 115
Query: 156 DLFAANHN 133
+ H+
Sbjct: 116 KIHLIGHS 123
>UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 106
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = -2
Query: 335 LXRAFLPRXVLCGIMPLTVFHRXLDGAXKWKGPRAGFTLHLLRRNDISLSLFVKKLPEML 156
+ R F R L FHR +W+ R+G + + + +S S F+KK+P
Sbjct: 1 MLRYFSQRNSLAACSSSGCFHRL-----EWRACRSGESPYKFQSLSVSRSKFIKKVPSGR 55
Query: 155 ICSQRTTTTLFPSRR 111
+ SQ T+ P RR
Sbjct: 56 VISQSTSAFWLPFRR 70
>UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L13 -
Cyanidioschyzon merolae (Red alga)
Length = 98
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNK--VVVVRCEQINISGNFFTNK 186
++I+ + +LGRLA+ + K LL + + +V+ QI ++GN + NK
Sbjct: 1 MLINAKDEILGRLASRVVKTLLTQSVTCIEIVQANQIQVTGNKYKNK 47
>UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L13 -
Tremblaya princeps
Length = 124
Score = 33.1 bits (72), Expect = 6.0
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVRCEQINISGNFFTNKLKLM 198
V+D RG +LGRLA +A +L N V V+ CE + ISG+ K+
Sbjct: 8 VLDARGMVLGRLAVTVAGLLRGKYKASYAHNAAPHNAVTVLNCEHVRISGSKAVGKVYYR 67
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGK 321
+P+ +L V GM+P R +
Sbjct: 68 HSGHPGGLRRTKLHDLMLRSPATVLRAAVHGMLPRNRLRDR 108
>UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13;
n=1; Pavlova lutheri|Rep: Chloroplast 50S ribosomal
protein L13 - Pavlova lutherii (Monochrysis lutheri)
Length = 225
Score = 33.1 bits (72), Expect = 6.0
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNKLKLM 198
VID G LGR+A IAK L+ G+ V+V+ +++ ISG F K
Sbjct: 73 VIDAEGMRLGRMATEIAKRLMGKHKVTFFPGSNMGDYVIVINADKVVISGAKFYQKEYFR 132
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTXRGKNALXRLRTYDG 354
R + P I+ K V+GM+P K G+ L+ + G
Sbjct: 133 HSGRPGGVTVESFEQLQARIPERIVEKAVKGMLP-KGPLGREQFRHLKVFAG 183
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,559,240
Number of Sequences: 1657284
Number of extensions: 11255485
Number of successful extensions: 26823
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 26116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26790
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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