Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N05
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.41 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    24   1.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    24   1.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = +2

Query: 383 LGFSTVYVCWYYILGHIRHRQRAHFTKKL 469
           + F  +++   ++ G ++H + AHF  K+
Sbjct: 82  IAFEVIFIVTVWMTGAVKHSKIAHFLNKM 110


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 249 LTHLNAIMQTLYFTLALLNDLFG 317
           L  + ++ Q L  T+AL ND+FG
Sbjct: 218 LRQIGSLSQLLSETVALFNDVFG 240


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 249 LTHLNAIMQTLYFTLALLNDLFG 317
           L  + ++ Q L  T+AL ND+FG
Sbjct: 218 LRQIGSLSQLLSETVALFNDVFG 240


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 183 QVHVNVPSTSAIVTPYAGKM 242
           Q H+ +     I TPY G++
Sbjct: 653 QTHMRIRPPKKIPTPYGGRL 672


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 183 QVHVNVPSTSAIVTPYAGKM 242
           Q H+ +     I TPY G++
Sbjct: 653 QTHMRIRPPKKIPTPYGGRL 672


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 183 QVHVNVPSTSAIVTPYAGKM 242
           Q H+ +     I TPY G++
Sbjct: 653 QTHMRIRPPKKIPTPYGGRL 672


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 183 QVHVNVPSTSAIVTPYAGKM 242
           Q H+ +     I TPY G++
Sbjct: 653 QTHMRIRPPKKIPTPYGGRL 672


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +1

Query: 580 DYLYFVHICCVT 615
           D  Y  H+CC T
Sbjct: 645 DVFYICHVCCST 656


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,003
Number of Sequences: 336
Number of extensions: 4101
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)