BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_N05 (648 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBPJ4664.05 |||conserved fungal protein|Schizosaccharomyces pom... 41 2e-04 SPAC30C2.03 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.44 SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 27 1.8 SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 27 2.3 SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 27 2.3 SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 27 2.3 SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 4.1 SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces... 26 4.1 SPBC106.07c |||N alpha-acetyltransferase Nat2 |Schizosaccharomyc... 25 7.1 >SPBPJ4664.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 163 Score = 40.7 bits (91), Expect = 2e-04 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Frame = +3 Query: 357 RIKDILFSALAFPLSMFVGITFWGIYAIDRELILPRSLXPYFPTWLNHVMHTNIMAFILI 536 ++K+IL + PL V I +W I + DR L++P+ P + +H + LI Sbjct: 17 KLKNILLYIVC-PLETIVSILYWSIVSYDRSLLIPKDRPVPLPLNFDISVHLMPTVYTLI 75 Query: 537 DLLTSFRMYPXK-KIGLSVL--CTYMLCYMVWIHVIY 638 D L F P IG S+L + + YM+W+ Y Sbjct: 76 DYL--FFSPPFSLSIGPSLLVYLSIAVSYMLWVEKCY 110 >SPAC30C2.03 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 210 Score = 29.5 bits (63), Expect = 0.44 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +3 Query: 69 QNLYIVLIHTYSNKEPTMLKILFHLLGAI 155 Q L++ ++TY N++P LK+L H G + Sbjct: 166 QRLWLTAMNTYENQKPPNLKLLLHDHGTV 194 >SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 971 Score = 27.5 bits (58), Expect = 1.8 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +3 Query: 363 KDILFSALAFPLSMFVGITFWGIYAIDRELILPRSLXPYFPTWLNHVMHTNIMAFILIDL 542 K ILFS L F +++ FW + L L YFP W H+ + A IL +L Sbjct: 273 KQILFSLLYFSSEVYLSFVFWSV------LTSLGLLVWYFPLW--HMGISGYEACILFEL 324 >SPCC569.05c |||spermidine family transporter |Schizosaccharomyces pombe|chr 3|||Manual Length = 576 Score = 27.1 bits (57), Expect = 2.3 Identities = 16/61 (26%), Positives = 24/61 (39%) Frame = +3 Query: 114 PTMLKILFHLLGAIHFGYGCYYDQVHVNVPSTSAIVTPYAGKMKYLTHLNAIMQTLYFTL 293 P M+ G + YY VH VP+ S + T + +L LN ++ F Sbjct: 448 PMMIGCFMFPAGIFWLSWSGYYSYVHWIVPTLSGLATGCGILLIFLQCLNYLIDAYLFRA 507 Query: 294 A 296 A Sbjct: 508 A 508 >SPBC36.01c |||spermidine family transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 580 Score = 27.1 bits (57), Expect = 2.3 Identities = 16/61 (26%), Positives = 25/61 (40%) Frame = +3 Query: 114 PTMLKILFHLLGAIHFGYGCYYDQVHVNVPSTSAIVTPYAGKMKYLTHLNAIMQTLYFTL 293 P M+ G + YY VH VP+ S ++T + +L LN ++ F Sbjct: 452 PMMIGSFLFPAGIFWLAWSGYYTYVHWIVPTLSGLLTGAGILLIFLQCLNYLLDAYLFRA 511 Query: 294 A 296 A Sbjct: 512 A 512 >SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schizosaccharomyces pombe|chr 2|||Manual Length = 427 Score = 27.1 bits (57), Expect = 2.3 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = -3 Query: 451 SSLSMAYMPQNVIPTNIDSGKAKALNNISFMRLIKGXSDGVGSLFPNKSFKSANVKYK 278 S S PQ+ I +D+ +A+ + +K D GSL + +FK A Y+ Sbjct: 24 SIFSQNAAPQSPIKVFMDTFRAELKKSQELQDSVKALQDSSGSLSESDTFKKARDAYE 81 >SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|||Manual Length = 843 Score = 26.2 bits (55), Expect = 4.1 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = +3 Query: 519 MAFILIDLLTS-FRMYPXKKIGLSVLCTYMLCYMVWIHVIYF 641 + FI+ +L+ F++ + LS LCT+ C M I + YF Sbjct: 469 LVFIVSVILSIYFQLGSTYWVTLSYLCTFTCCIMTIIRINYF 510 >SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces pombe|chr 1|||Manual Length = 235 Score = 26.2 bits (55), Expect = 4.1 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +3 Query: 369 ILFSALAFPLSMFVGITFWGIYAIDRELILPRSLXPYFPTWLNHVMHTNI 518 ++ S AFPLS F Y +++ + + P LN V+HTN+ Sbjct: 12 LILSDTAFPLSSFSYSYGLESYLSHQQVRDVNAFFNFLPLSLNSVLHTNL 61 >SPBC106.07c |||N alpha-acetyltransferase Nat2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 167 Score = 25.4 bits (53), Expect = 7.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 159 FGYGCYYDQVHVNVPSTSAIVTPYAGKMK 245 F YG + V VP T+AIV P A + + Sbjct: 133 FAYGIHKALVVARVPLTAAIVPPLAKRFR 161 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,887,631 Number of Sequences: 5004 Number of extensions: 63568 Number of successful extensions: 201 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 201 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 291768710 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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