Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_N05
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   3.4  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   4.4  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   4.4  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   5.9  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   5.9  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   5.9  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   5.9  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   5.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.8  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 417 TFWGIYAIDRELILPRSLXPYFPTWLNHV 503
           T W  Y I   L+  +S     P+W N++
Sbjct: 170 TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 198


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 417 TFWGIYAIDRELILPRSLXPYFPTWLNHV 503
           T W  Y I   L+  +S     P+W N++
Sbjct: 185 TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 213


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 417 TFWGIYAIDRELILPRSLXPYFPTWLNHV 503
           T W  Y I   L+  +S     P+W N++
Sbjct: 73  TPWDYYYIYHTLVAEQSYGLTLPSWTNNI 101


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = +3

Query: 597 TYMLCYMVWIHVI 635
           +Y++CY +W++ +
Sbjct: 215 SYLVCYGIWVYFV 227


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 4/13 (30%), Positives = 11/13 (84%)
 Frame = +3

Query: 597 TYMLCYMVWIHVI 635
           +Y++CY +W++ +
Sbjct: 91  SYLVCYGIWVYFV 103


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 218 CHSICWKDEILDPFECYYANF 280
           C++I + ++I  P   YY NF
Sbjct: 103 CYNINYIEQIPVPVPVYYGNF 123


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 218 CHSICWKDEILDPFECYYANF 280
           C++I + ++I  P   YY NF
Sbjct: 103 CYNINYIEQIPVPVPVYYGNF 123


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 218 CHSICWKDEILDPFECYYANF 280
           C++I + ++I  P   YY NF
Sbjct: 103 CYNINYIEQIPVPVPVYYGNF 123


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 218 CHSICWKDEILDPFECYYANF 280
           C++I + ++I  P   YY NF
Sbjct: 103 CYNINYIEQIPVPVPVYYGNF 123


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 218 CHSICWKDEILDPFECYYANF 280
           C++I + ++I  P   YY NF
Sbjct: 103 CYNINYIEQIPVPVPVYYGNF 123


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 237 KMKYLTHLNAIMQTLYFTLALLNDLFGNNE 326
           +++YL  LNA+   L  +  L  D    NE
Sbjct: 50  QLRYLEELNALRTELGASTKLATDTTSENE 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,631
Number of Sequences: 438
Number of extensions: 4312
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)