Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_M24
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RLI9 Cluster: Asparagine-rich protein; n=5; Plasmodiu...    36   1.1  
UniRef50_Q860P5 Cluster: Bat2-prov protein; n=2; Xenopus|Rep: Ba...    33   4.5  
UniRef50_UPI000150A0D5 Cluster: hypothetical protein TTHERM_0024...    33   6.0  
UniRef50_Q481Y4 Cluster: Putative ATP-dependent DNA helicase; n=...    33   6.0  
UniRef50_Q8I3A0 Cluster: Cation-transporting ATPase; n=3; Plasmo...    33   6.0  
UniRef50_UPI0000E4864A Cluster: PREDICTED: similar to Xotch prot...    33   7.9  

>UniRef50_Q7RLI9 Cluster: Asparagine-rich protein; n=5; Plasmodium
           (Vinckeia)|Rep: Asparagine-rich protein - Plasmodium
           yoelii yoelii
          Length = 828

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 457 GNSECSKRNNMETLAQGENFERKDATSQEKGSTEN 561
           GN +  K+NN+  +A  ENF + + T  +K ST N
Sbjct: 412 GNDKIVKQNNVNNIANKENFSKVNTTKNDKNSTSN 446


>UniRef50_Q860P5 Cluster: Bat2-prov protein; n=2; Xenopus|Rep:
            Bat2-prov protein - Xenopus laevis (African clawed frog)
          Length = 2030

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +1

Query: 424  RDDNVKKGNASGNSECSKRNNMETLAQGENFERKDATSQEKGS 552
            R+D +  G +SG  +  +RN  ET ++G  +E      +++GS
Sbjct: 1090 REDGIADGKSSGRRDGRERNTSETRSEGSEYEEVPKRRRQRGS 1132


>UniRef50_UPI000150A0D5 Cluster: hypothetical protein
           TTHERM_00242590; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00242590 - Tetrahymena
           thermophila SB210
          Length = 556

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +1

Query: 415 SRARDDNVKKGNASGNSECSKRNNMETLAQGENFERKDATSQEKGSTEN 561
           ++ ++DN    N++ N E +  NN E     +N E+ D+  +   S  N
Sbjct: 423 NQEKNDNSNNENSNNNQEVNNSNNQENDTNNKNQEQNDSNQESNNSNNN 471


>UniRef50_Q481Y4 Cluster: Putative ATP-dependent DNA helicase; n=1;
           Colwellia psychrerythraea 34H|Rep: Putative
           ATP-dependent DNA helicase - Colwellia psychrerythraea
           (strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
          Length = 622

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +1

Query: 406 THLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFERKDATSQEKGSTENXXE 570
           T +S+ARD N K   A+  S  SK+  ++ LA+ E+F     +++    T N  E
Sbjct: 123 TKISKARDKNGKTALANARSLKSKQKRLDGLAEVESFTYSPTSNKTSKGTLNHSE 177


>UniRef50_Q8I3A0 Cluster: Cation-transporting ATPase; n=3;
            Plasmodium|Rep: Cation-transporting ATPase - Plasmodium
            falciparum (isolate 3D7)
          Length = 2563

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +1

Query: 364  YSTLTVHAXSNARATHLSRARDDNVKKGNASGNSECSKRNNMETLAQGENFERKD--ATS 537
            YS    H  +N +  +     D   +KGN  G     ++N+ + + +GE  E KD  +  
Sbjct: 834  YSRFRKHINTNLKNKNNKNESDGEEEKGNIDGIYILKQKNHKKDMIKGEE-ENKDNFSKK 892

Query: 538  QEKGSTENXXE 570
            +EK   EN  E
Sbjct: 893  EEKSDNENSNE 903


>UniRef50_UPI0000E4864A Cluster: PREDICTED: similar to Xotch protein -
            African clawed frog; n=5; Strongylocentrotus
            purpuratus|Rep: PREDICTED: similar to Xotch protein -
            African clawed frog - Strongylocentrotus purpuratus
          Length = 1968

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 584  LSCELSXXFSVDPFSCEVASLRSKFSPCARVS 489
            ++C+ S   S D  +CEV  +  +F+PC RVS
Sbjct: 958  ITCQPSGALSADLPTCEVIDICQRFAPCPRVS 989


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,524,422
Number of Sequences: 1657284
Number of extensions: 8362798
Number of successful extensions: 19775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19755
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)