Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_M24
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003302-1|AAO25062.1|  653|Drosophila melanogaster GH11071p pro...    28   9.6  
AE014134-784|AAN10338.1|  653|Drosophila melanogaster CG2950-PC,...    28   9.6  
AE014134-783|AAF50972.1|  653|Drosophila melanogaster CG2950-PB,...    28   9.6  
AE014134-782|AAF50973.1|  653|Drosophila melanogaster CG2950-PA,...    28   9.6  

>BT003302-1|AAO25062.1|  653|Drosophila melanogaster GH11071p
           protein.
          Length = 653

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 427 DDNVKKGNASGNSECSKRNNMETLAQGENFERKDATSQEKGSTE 558
           DD V    ++G S  S +N +   ++  +F RK++T + KG+ E
Sbjct: 517 DDEVFAEPSNGGSSTSNQNGLAR-SRRSHFSRKESTPETKGARE 559


>AE014134-784|AAN10338.1|  653|Drosophila melanogaster CG2950-PC,
           isoform C protein.
          Length = 653

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 427 DDNVKKGNASGNSECSKRNNMETLAQGENFERKDATSQEKGSTE 558
           DD V    ++G S  S +N +   ++  +F RK++T + KG+ E
Sbjct: 517 DDEVFAEPSNGGSSTSNQNGLAR-SRRSHFSRKESTPETKGARE 559


>AE014134-783|AAF50972.1|  653|Drosophila melanogaster CG2950-PB,
           isoform B protein.
          Length = 653

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 427 DDNVKKGNASGNSECSKRNNMETLAQGENFERKDATSQEKGSTE 558
           DD V    ++G S  S +N +   ++  +F RK++T + KG+ E
Sbjct: 517 DDEVFAEPSNGGSSTSNQNGLAR-SRRSHFSRKESTPETKGARE 559


>AE014134-782|AAF50973.1|  653|Drosophila melanogaster CG2950-PA,
           isoform A protein.
          Length = 653

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +1

Query: 427 DDNVKKGNASGNSECSKRNNMETLAQGENFERKDATSQEKGSTE 558
           DD V    ++G S  S +N +   ++  +F RK++T + KG+ E
Sbjct: 517 DDEVFAEPSNGGSSTSNQNGLAR-SRRSHFSRKESTPETKGARE 559


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,965,363
Number of Sequences: 53049
Number of extensions: 401063
Number of successful extensions: 963
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)