Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_M24
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-5|AAA79347.1|  311|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr...    28   6.7  
AC024817-6|AAY86298.2|  488|Caenorhabditis elegans Hypothetical ...    28   6.7  

>U37429-5|AAA79347.1|  311|Caenorhabditis elegans Hypothetical
           protein F09E5.7 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/27 (40%), Positives = 21/27 (77%)
 Frame = +2

Query: 413 SVAQGMITSRKAMQVVTVNAVSGTTWK 493
           SVA+ +++++K+ Q++T +AV  T WK
Sbjct: 136 SVAKLILSNKKSQQILTSDAVDNTFWK 162


>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
            presynaptic morphologyprotein 1 protein.
          Length = 3766

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -2

Query: 526  LCVRNFRPALGF-PCCSAYCIHCYHLHCL 443
            +CV  F   LG  PC    C H +H HC+
Sbjct: 3516 VCVICFTERLGAAPCIRLGCGHMFHFHCV 3544


>AC024817-6|AAY86298.2|  488|Caenorhabditis elegans Hypothetical
           protein Y54G2A.42 protein.
          Length = 488

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -2

Query: 130 LLIDIKERFSFNY--TSLYTAKRFNAFSYSKITKIPM 26
           LL+D+KERF+F Y  +SL+   R     Y   T  PM
Sbjct: 138 LLVDLKERFNFQYGRSSLHDLLRAMDLVYKVKTYNPM 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,087,052
Number of Sequences: 27780
Number of extensions: 218495
Number of successful extensions: 482
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)