BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_M22 (372 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC776.01 |rpl29||60S ribosomal protein L29|Schizosaccharomyces... 78 4e-16 SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomy... 25 2.9 SPBC342.06c |rtt109|kat11|RTT109 family histone lysine acetyltra... 25 3.8 SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 25 3.8 SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 25 5.0 SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 24 6.7 SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 24 6.7 SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 24 8.8 >SPBC776.01 |rpl29||60S ribosomal protein L29|Schizosaccharomyces pombe|chr 2|||Manual Length = 61 Score = 78.2 bits (184), Expect = 4e-16 Identities = 33/51 (64%), Positives = 41/51 (80%) Frame = +1 Query: 172 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNL 324 MAKSKNHTNHNQN+KAHRNGIK+P+K R++S D KF RNQ+F +G + Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANRGTV 51 >SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomyces pombe|chr 3|||Manual Length = 442 Score = 25.4 bits (53), Expect = 2.9 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +2 Query: 116 VGIYSNDFIFLYRIENSSKWQSQRIIQIITKTAK 217 +G+Y ++Y NS+ W++ R+ KTAK Sbjct: 249 IGLYMAGAAYMYNYTNSTVWKT-RVEGFANKTAK 281 >SPBC342.06c |rtt109|kat11|RTT109 family histone lysine acetyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 369 Score = 25.0 bits (52), Expect = 3.8 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +1 Query: 172 MAKSKNHTNHNQNRKAHRNGIKKPRK 249 +AK + NHN ++ A + I +PRK Sbjct: 340 LAKRDDRKNHNHSKPATQANILQPRK 365 >SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1057 Score = 25.0 bits (52), Expect = 3.8 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +2 Query: 152 RIENSSKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPLAWIQN 286 + E+ S+ ++I TK KLT K++ R LAW+Q+ Sbjct: 997 KFEDLSEKDLKKIEAKATKKKKLTRNEIKAKERRARERELAWLQS 1041 >SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe|chr 1|||Manual Length = 727 Score = 24.6 bits (51), Expect = 5.0 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +2 Query: 203 TKTAKLTEMVSKSQGRPGTN 262 T A +T++VSK G PG N Sbjct: 220 TNPADITDLVSKYAGPPGNN 239 >SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF3c|Schizosaccharomyces pombe|chr 1|||Manual Length = 918 Score = 24.2 bits (50), Expect = 6.7 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +1 Query: 190 HTNHNQNRKAHRNGIKKPRKTRHES 264 HTN +NR+ + G K R R E+ Sbjct: 887 HTNPQENRRRDKGGSVKRRNERTEN 911 >SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 4196 Score = 24.2 bits (50), Expect = 6.7 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = -3 Query: 307 KTFDSLKILDPCQGWIRAWSSLAF*YHFC 221 K SL +LD + AW+SL Y+ C Sbjct: 518 KDLQSLNVLDISLKGVNAWNSLETSYYNC 546 >SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 574 Score = 23.8 bits (49), Expect = 8.8 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +2 Query: 122 IYSNDFIFLYRIENSSKWQSQRIIQIITKTAKLTEMVSKSQGRPGT 259 IYSND R++ +S QRI T TE V+ + P + Sbjct: 243 IYSNDSFQDPRVQANSPLTIQRISSAAPSTPTSTENVNYNMTTPSS 288 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,288,972 Number of Sequences: 5004 Number of extensions: 22185 Number of successful extensions: 52 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 52 length of database: 2,362,478 effective HSP length: 65 effective length of database: 2,037,218 effective search space used: 118158644 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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