Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M18
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 110 3e-23
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 106 4e-22
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 103 5e-21
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 96 6e-19
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 93 4e-18
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 89 7e-17
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 87 5e-16
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 85 1e-15
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 71 3e-11
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 65 1e-09
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 65 2e-09
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 63 6e-09
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 61 2e-08
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 54 4e-06
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 54 4e-06
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 47 3e-04
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 37 0.49
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 35 1.5
UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 34 3.4
UniRef50_A1UMG8 Cluster: Alpha/beta hydrolase fold; n=20; Coryne... 33 6.0
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 110 bits (264), Expect = 3e-23
Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 7/177 (3%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPL---RFVHVVEILS-- 187
MGISRD+WHKRR TG + + ++ + RP+AN R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANTKIGPRRIHTVRVRGGN 52
Query: 188 -TVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQW 361
R + V + + + ++ + + + N V+ + L+KN IV+ D+TP+RQW
Sbjct: 53 KKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQW 112
Query: 362 YESHYTLPLGRXKGAKLTEAXEAIINXXRSQKTARKYLARQRLAKVEGALXEQFHTG 532
YESHY LPLGR KGAKLT E I+N RS+K +KY R++ AK+ L EQF G
Sbjct: 113 YESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 169
Score = 106 bits (255), Expect = 4e-22
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = +1
Query: 70 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 249
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 250 TRIIDVVYNASNNELVRTKTLAQEC 324
TRIIDVVYNASNNELVRTKTL + C
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNC 100
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +3
Query: 495 RLRVLXKSNSTQGRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNRAK 650
++ L + QG+LLAC+ASRPGQCGRADGY+L+GK LEFYL KI + + K
Sbjct: 157 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 106 bits (255), Expect = 4e-22
Identities = 52/85 (61%), Positives = 56/85 (65%)
Frame = +1
Query: 70 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 249
G +PY ++ G P R RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 250 TRIIDVVYNASNNELVRTKTLAQEC 324
TRIIDVVYNASNNELVRTKTL + C
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVKNC 100
Score = 96.3 bits (229), Expect = 6e-19
Identities = 59/157 (37%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPL---RFVHVVEILS-- 187
MGISRD+WHKRR TG + + ++ + RP+AN R +H V +
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANTKIGPRRIHTVRVRGGN 52
Query: 188 -TVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQW 361
R + V + + + ++ + + + N V+ + L+KN IV+ D+TP+RQW
Sbjct: 53 KKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQW 112
Query: 362 YESHYTLPLGRXKGAKLTEAXEAIINXXRSQKTARKY 472
YESHY LPLGR KGAKLT E I+N RS+K +KY
Sbjct: 113 YESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 103 bits (246), Expect = 5e-21
Identities = 70/174 (40%), Positives = 94/174 (54%), Gaps = 4/174 (2%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPL---RFVHVVEILSTV 193
MGISRD+WHKRR TG + + ++ + RP+AN R +H V V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANTKIGPRRIHTVR----V 48
Query: 194 RCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQWYES 370
R T T + D + + + N V+ + L+KN IV+ D+TP+RQWYES
Sbjct: 49 RGGCTRKTRIID-------------VVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYES 95
Query: 371 HYTLPLGRXKGAKLTEAXEAIINXXRSQKTARKYLARQRLAKVEGALXEQFHTG 532
HY LPLGR KGAKLT E I+N RS+K +KY R++ AK+ L EQF G
Sbjct: 96 HYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQG 149
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +3
Query: 495 RLRVLXKSNSTQGRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNRAK 650
++ L + QG+LLAC+ASRPGQCGRADGY+L+GK LEFYL KI + + K
Sbjct: 137 KISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/49 (65%), Positives = 34/49 (69%)
Frame = +1
Query: 178 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQEC 324
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTL + C
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNC 80
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 158
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 96.3 bits (229), Expect = 6e-19
Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRF---VHVVEIL--- 184
MGISRD HKRRATG + + +R R RP+AN VH V
Sbjct: 1 MGISRDSAHKRRATGGKRKS--------LRKKRKFELGRPAANTKLGSGRVHKVRTRGGN 52
Query: 185 STVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQW 361
+ +R + + + +A+ + + + + N V+ + L+KN+IVV DATPFRQW
Sbjct: 53 TKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQW 112
Query: 362 YESHYTLPLGRXKGAKLTEAXEA--IINXXRSQKTARKYLARQRLAKVEGALXEQFHTG 532
YE+HY LPLGR + K + + ++ RS+K +KYL RQ+ KVE AL +QF +G
Sbjct: 113 YEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTL +
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVK 98
Score = 70.5 bits (165), Expect = 3e-11
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +3
Query: 525 TQGRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNR 644
T GR+LAC++SRPGQCGR+DGYIL+GK LEFYL KI S +
Sbjct: 169 TSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIH 155
GKR +RKKRK+ELGRPAANT+LG R+H
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVH 44
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 93.5 bits (222), Expect = 4e-18
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = +1
Query: 118 PLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 297
P T S+ R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELV
Sbjct: 33 PANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELV 92
Query: 298 RTKTLAQ 318
RT+TL +
Sbjct: 93 RTQTLVK 99
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +3
Query: 531 GRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNRAK 650
GRLLAC++SRPGQCGRADGYIL+GK LEFY+ K+ + K
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
Score = 57.2 bits (132), Expect = 3e-07
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSAN-PLRFVHVVEILSTVRC 199
MGISRD HKRRATG + A ++ + R + S+N +R V V R
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRK--YELGRQPANTKLSSNKTVRRVRVRGGNVKWRA 58
Query: 200 VWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQWYESHY 376
+ + + + + ++ + + + N V+ + L+K+AIV DA PF+QWY +HY
Sbjct: 59 LRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHY 118
Query: 377 TLPLGRXK--------GAKLTEAXEAIINXXRSQKTARKYLARQRLAKVEGALXEQFHTG 532
+ +GR K A+ E A +S RK R+ ++ + EQF +G
Sbjct: 119 GVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSG 178
Score = 35.9 bits (79), Expect = 0.85
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQR 149
GK+ RKKRKYELGR ANT+L +
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNK 42
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 89.4 bits (212), Expect = 7e-17
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTL +
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVK 98
Score = 58.8 bits (136), Expect = 1e-07
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +3
Query: 525 TQGRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNR 644
+ GRLLAC++SRPGQCGR DGY+L+G+ L FY ++ +
Sbjct: 147 SSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
Score = 52.8 bits (121), Expect = 7e-06
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRFVHVVEILSTVRCV 202
MGISRD HKRR TG H ++ + R + + +R V R +
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRK--YELGRPSSNTKLGSKLVRKVRCRGGNLKFRAL 58
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQWYESHYT 379
+ + + + +M + + + N V+ + L+KNAIV D TPF+ W+++HY
Sbjct: 59 RLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYG 118
Query: 380 LPLGR 394
L LG+
Sbjct: 119 LELGK 123
Score = 39.5 bits (88), Expect = 0.069
Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = +3
Query: 69 GKRAPI-RKKRKYELGRPAANTRLGPQRI 152
G R P+ +KKRKYELGRP++NT+LG + +
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLV 43
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 86.6 bits (205), Expect = 5e-16
Identities = 37/57 (64%), Positives = 46/57 (80%)
Frame = +1
Query: 154 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQEC 324
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTL + C
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNC 100
Score = 56.4 bits (130), Expect = 6e-07
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 14/184 (7%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRFVHVVEILSTVRCV 202
MGI R HKR+ TG +T H + + R R A + V +R +
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKA--ELGRLPANTRLGARRVSPVRARGGNFKIRAL 58
Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQWYESHYT 379
+ + +A V L+ + + T N V+ + L+KN IV DA PF++WY HY
Sbjct: 59 RLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYG 118
Query: 380 LPL------------GRXKGAKLTEAXEAIINXXR-SQKTARKYLARQRLAKVEGALXEQ 520
+ L KG K A + + S K R++ R+R +VE A+ +Q
Sbjct: 119 IDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWTRRRRNHRVEKAIADQ 178
Query: 521 FHTG 532
G
Sbjct: 179 LREG 182
Score = 49.6 bits (113), Expect = 6e-05
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +3
Query: 528 QGRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNR 644
+GR+LA + SRPGQ GRADG +L+G L+FYL ++ +
Sbjct: 181 EGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/67 (62%), Positives = 49/67 (73%)
Frame = +1
Query: 118 PLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 297
P T S+ R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELV
Sbjct: 130 PANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELV 189
Query: 298 RTKTLAQ 318
RT+TL +
Sbjct: 190 RTQTLVK 196
Score = 42.7 bits (96), Expect = 0.007
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 311 LLKNAIVVXDATPFRQWYESHYTLPLGRXK 400
L+K+AIV DA PF+QWY +HY + +GR K
Sbjct: 194 LVKSAIVQVDAAPFKQWYLTHYGVDIGRKK 223
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 70.5 bits (165), Expect = 3e-11
Identities = 32/54 (59%), Positives = 40/54 (74%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQEC 324
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TL + C
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGC 109
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +3
Query: 537 LLACVASRPGQCGRADGYILQGKXLEFYLTKI 632
+LA ++SRPGQ G ADGYIL+G L FY K+
Sbjct: 140 ILARISSRPGQVGTADGYILEGPELLFYQKKL 171
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TL +
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVK 98
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 531 GRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNR 644
GR+LAC++SRPGQ G +GYIL+GK L+FY KI +
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 35.9 bits (79), Expect = 0.85
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIH 155
GK+ ++KK+K +GR ANTRLG R+H
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVH 44
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +3
Query: 543 ACVASRPGQCGRADGYILQGKXLEFYLTKIXSNRAK 650
AC+ASRPGQCGRADGYIL+GK LEFYL KI + + K
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 62.9 bits (146), Expect = 6e-09
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +1
Query: 154 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL +
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTK 98
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 528 QGRLLACVASRPGQCGRADGYILQGKXLEFYLTK 629
+G L A + SRPGQ G A G++LQG L+FY K
Sbjct: 130 KGHLYAIITSRPGQVGMAQGHVLQGDELKFYADK 163
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = +3
Query: 513 KSNSTQGRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNRAK 650
K GRLLAC++S+PGQ GRADGY+ +GK LEF+ K+ + +AK
Sbjct: 75 KEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 45.2 bits (102), Expect = 0.001
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Frame = +2
Query: 317 KNAIVVXDATPFRQWYESHYTLPLGR-----XKGAKLT--EAXEAIINXXRSQKTARKYL 475
K+AIV PFRQW+E+ Y LG KG +T E + RS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 476 ARQRL--AKVEGALXEQFHTGXFAGLRGESPRSV 571
RQ L A VE +L E+F TG P V
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQV 94
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 53.6 bits (123), Expect = 4e-06
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL +
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTK 98
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/34 (61%), Positives = 29/34 (85%)
Frame = +3
Query: 531 GRLLACVASRPGQCGRADGYILQGKXLEFYLTKI 632
G++LA + SRPGQ GRADGYIL+G+ L+++L KI
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKI 175
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 267
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +3
Query: 531 GRLLACVASRPGQCGRADGYILQGKXLEFY 620
GRL A V+SRPGQ GR DGYIL+G+ L FY
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFY 135
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 72 KRAPIRKKRKYELGRPAANTRLGPQRIH 155
KR+ RKKR +E GR ANTR+GP+RIH
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIH 44
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/52 (36%), Positives = 36/52 (69%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L++
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 36.7 bits (81), Expect = 0.49
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +1
Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L +
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTK 96
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 60 PPAGKRAPIRKKRKYELGRPAANTRLGPQR 149
P G+ P RKKRK+E+G P T +G +R
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEER 41
>UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 316
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 33 VGITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSXSF-TWWKY 182
+G+TG G PA ++ ++K++ + P T L P+ +S SF T W +
Sbjct: 10 MGLTGSLAGTPAPEKKQVKKRKSWGQQLPEPKTNLPPRYFNSSSFITQWHW 60
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 60 PPAGKRAPIRKKRKYELGRPAANTRLGPQRI 152
P GK P KR+YELGR TRLG + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDREL 42
>UniRef50_A1UMG8 Cluster: Alpha/beta hydrolase fold; n=20;
Corynebacterineae|Rep: Alpha/beta hydrolase fold -
Mycobacterium sp. (strain KMS)
Length = 263
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 212 VTSLGDRNVQLAKPVSLMLCIMHLTMNWCV--QRPLLKNAIVVXDATP 349
V LGD +L PV+L+ M WC+ RP L NA+VV D P
Sbjct: 74 VAELGDAVARLGSPVTLIGHSMGGLHAWCLAATRPDLVNAVVVEDMAP 121
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,365,224
Number of Sequences: 1657284
Number of extensions: 12396108
Number of successful extensions: 31780
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 30793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31765
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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