BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_M18 (653 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 81 1e-16 SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 81 1e-16 SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 27 1.8 SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 26 4.1 SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 26 5.5 SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 7.2 SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 7.2 SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 9.5 >SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 81.0 bits (191), Expect = 1e-16 Identities = 37/52 (71%), Positives = 43/52 (82%) Frame = +1 Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318 R RGGN K+RALRLD+GNFSWGSE ++KTRII V Y+ SNNELVRT TL + Sbjct: 47 RVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTK 98 Score = 63.3 bits (147), Expect = 3e-11 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 1/181 (0%) Frame = +2 Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRFVHVVEILSTVRCV 202 MGI+RD HKR ATG + + ++ + R R + V V R + Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKF--ELGRQPSNTRIGPKRIHEVRVRGGNKKFRAL 58 Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQWYESHYT 379 + + ++K ++ H + N V+ L K+AIV DA PFR WYE+HY Sbjct: 59 RLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYG 118 Query: 380 LPLGRXKGAKLTEAXEAIINXXRSQKTARKYLARQRLAKVEGALXEQFHTGXFAGLRGES 559 + +G KG K T +S+ RK+ AR +KV+ AL QF G + Sbjct: 119 ILMG-SKGKKATSTPN-----PKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSR 172 Query: 560 P 562 P Sbjct: 173 P 173 Score = 51.2 bits (117), Expect = 1e-07 Identities = 22/34 (64%), Positives = 27/34 (79%) Frame = +3 Query: 531 GRLLACVASRPGQCGRADGYILQGKXLEFYLTKI 632 GRL A V+SRPGQ GR DGYIL+G+ L FYL ++ Sbjct: 163 GRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196 Score = 47.6 bits (108), Expect = 2e-06 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = +3 Query: 72 KRAPIRKKRKYELGRPAANTRLGPQRIH 155 KRA RKKRK+ELGR +NTR+GP+RIH Sbjct: 17 KRAQYRKKRKFELGRQPSNTRIGPKRIH 44 >SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 81.0 bits (191), Expect = 1e-16 Identities = 37/52 (71%), Positives = 43/52 (82%) Frame = +1 Query: 163 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLAQ 318 R RGGN K+RALRLD+GNFSWGSE ++KTRII V Y+ SNNELVRT TL + Sbjct: 47 RVRGGNKKFRALRLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTK 98 Score = 62.5 bits (145), Expect = 5e-11 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 1/181 (0%) Frame = +2 Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRFVHVVEILSTVRCV 202 MGI+RD HKR ATG + + ++ + R R + V V R + Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKF--ELGRQPSNTRIGPKRIHEVRVRGGNKKFRAL 58 Query: 203 WTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQWYESHYT 379 + + ++K ++ H + N V+ L K+AIV DA PFR WYE+HY Sbjct: 59 RLDSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYG 118 Query: 380 LPLGRXKGAKLTEAXEAIINXXRSQKTARKYLARQRLAKVEGALXEQFHTGXFAGLRGES 559 + +G KG K T +S+ RK+ AR +KV+ AL QF G + Sbjct: 119 ILMG-SKGKKATATP-----TPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSR 172 Query: 560 P 562 P Sbjct: 173 P 173 Score = 51.2 bits (117), Expect = 1e-07 Identities = 22/34 (64%), Positives = 27/34 (79%) Frame = +3 Query: 531 GRLLACVASRPGQCGRADGYILQGKXLEFYLTKI 632 GRL A V+SRPGQ GR DGYIL+G+ L FYL ++ Sbjct: 163 GRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRM 196 Score = 47.6 bits (108), Expect = 2e-06 Identities = 20/28 (71%), Positives = 24/28 (85%) Frame = +3 Query: 72 KRAPIRKKRKYELGRPAANTRLGPQRIH 155 KRA RKKRK+ELGR +NTR+GP+RIH Sbjct: 17 KRAQYRKKRKFELGRQPSNTRIGPKRIH 44 >SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharomyces pombe|chr 3|||Manual Length = 635 Score = 27.5 bits (58), Expect = 1.8 Identities = 18/41 (43%), Positives = 24/41 (58%) Frame = +2 Query: 458 TARKYLARQRLAKVEGALXEQFHTGXFAGLRGESPRSVWSR 580 T RKYL + A +EGA +Q + A +R ES +VWSR Sbjct: 431 TCRKYLPKMHDANLEGANIDQ--SVLMASVR-ESLPAVWSR 468 >SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces pombe|chr 3|||Manual Length = 2812 Score = 26.2 bits (55), Expect = 4.1 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = -2 Query: 88 RMGARFPAGGPSLMPVIPTNTHLSWVE 8 RM F L+PVI T THLS VE Sbjct: 1196 RMSVDFSEKYTQLIPVITTYTHLSEVE 1222 >SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 408 Score = 25.8 bits (54), Expect = 5.5 Identities = 8/22 (36%), Positives = 15/22 (68%) Frame = -1 Query: 590 VTIGATTLTWATRHASQQTXLC 525 +T+G T+L+W+ RH+ + C Sbjct: 329 LTLGGTSLSWSWRHSGRIVSAC 350 >SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Phf2|Schizosaccharomyces pombe|chr 1|||Manual Length = 538 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -1 Query: 284 LDALYTTSMIRVLRVEHSDPQEKLPVSRR 198 L+ + T S +V R H DP KLP RR Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221 >SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr 1|||Manual Length = 1337 Score = 25.4 bits (53), Expect = 7.2 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%) Frame = -2 Query: 208 CPDAAHGT*YF--HHVNEXEWIR*GPSLVFAAGRPNSYFLFLRMGARFP 68 CPD + G Y V + ++R PS+++A ++ LF+R+ ++P Sbjct: 307 CPDPSQGFNYCIREAVFQGYFVRPLPSIIWALFEFSAVALFIRLKMKYP 355 >SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1436 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 181 TKYRALRLDTGNFSWGSECSTRKTRI 258 T YRA+ LDTG+ E + K RI Sbjct: 1133 TVYRAVNLDTGDLMAVKEVALHKPRI 1158 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,531,770 Number of Sequences: 5004 Number of extensions: 48343 Number of successful extensions: 110 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 108 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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