Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M18
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 128 3e-32
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 4.5
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 4.5
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 4.5
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 6.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 6.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 6.0
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 6.0
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 7.9
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 128 bits (310), Expect = 3e-32
Identities = 80/178 (44%), Positives = 100/178 (56%), Gaps = 8/178 (4%)
Frame = +2
Query: 23 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSAN----PLRFVHVVEILS- 187
MGISRDHWHKRRATG + +R R RP+AN P R +H V
Sbjct: 1 MGISRDHWHKRRATGGKRKP--------IRKKRKFELGRPAANTKLGPQR-IHTVRTRGG 51
Query: 188 --TVRCVWTPVTSLGDRNVQLAKPVSLMLCIMHLTMNWCVQ-RPLLKNAIVVXDATPFRQ 358
R + + + + ++ + + + N V+ + L+KNAIV DATPFRQ
Sbjct: 52 NKKYRALRLDTGNFSWGSECTTRKTRIIDVVYNASNNELVRTKTLVKNAIVTIDATPFRQ 111
Query: 359 WYESHYTLPLGRXKGAKLTEAXEAIINXXRSQKTARKYLARQRLAKVEGALXEQFHTG 532
WYE HY LPLGR +GAKLTEA E ++N RS+K KY ARQR AKVE AL EQF TG
Sbjct: 112 WYEGHYVLPLGRKRGAKLTEAEEEVLNKKRSKKAEAKYKARQRFAKVEPALEEQFATG 169
Score = 105 bits (251), Expect = 5e-25
Identities = 51/83 (61%), Positives = 57/83 (68%)
Frame = +1
Query: 70 GNVRPYARRGSMS*GVPLQTPGSALSESTPXRSRGGNTKYRALRLDTGNFSWGSECSTRK 249
G +P ++ G P R+RGGN KYRALRLDTGNFSWGSEC+TRK
Sbjct: 16 GKRKPIRKKRKFELGRPAANTKLGPQRIHTVRTRGGNKKYRALRLDTGNFSWGSECTTRK 75
Query: 250 TRIIDVVYNASNNELVRTKTLAQ 318
TRIIDVVYNASNNELVRTKTL +
Sbjct: 76 TRIIDVVYNASNNELVRTKTLVK 98
Score = 68.9 bits (161), Expect = 4e-14
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = +3
Query: 531 GRLLACVASRPGQCGRADGYILQGKXLEFYLTKIXSNRAK 650
GR+LAC++SRPGQCGR DGYIL+GK LEFY+ +I S +AK
Sbjct: 169 GRVLACISSRPGQCGREDGYILEGKELEFYMRRIKSKKAK 208
Score = 61.3 bits (142), Expect = 8e-12
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +3
Query: 69 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 158
GKR PIRKKRK+ELGRPAANT+LGPQRIH+
Sbjct: 16 GKRKPIRKKRKFELGRPAANTKLGPQRIHT 45
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 367 LIPLPEWSCIXYNNC 323
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 367 LIPLPEWSCIXYNNC 323
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 367 LIPLPEWSCIXYNNC 323
L P P+WS Y++C
Sbjct: 104 LQPYPDWSFAKYDDC 118
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 367 LIPLPEWSCIXYNNC 323
L P P+WS Y +C
Sbjct: 109 LQPYPDWSFAKYEDC 123
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 367 LIPLPEWSCIXYNNC 323
L P P+WS Y +C
Sbjct: 110 LRPYPDWSFAKYEDC 124
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 367 LIPLPEWSCIXYNNC 323
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 367 LIPLPEWSCIXYNNC 323
L P P+WS Y +C
Sbjct: 108 LQPYPDWSWANYKDC 122
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +2
Query: 308 PLLKNAIVVXDATPFRQWYESHYTLP 385
P + +A V TP ++ ++ HY +P
Sbjct: 186 PTVTSACVGSAYTPLKEDHDDHYGVP 211
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,615
Number of Sequences: 438
Number of extensions: 3620
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -