BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_M17 (639 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_03_0373 - 13194723-13195847,13196219-13196809 31 0.77 05_06_0034 + 25082875-25084113 31 1.0 04_03_0102 + 11275656-11275866,11276648-11276811,11276832-112769... 29 4.1 08_02_1096 - 24280910-24281195,24281326-24281711 28 5.4 01_03_0163 + 13346586-13347809 28 7.2 12_01_0572 + 4684050-4684243,4684332-4684426,4684686-4685404 27 9.5 07_03_0163 + 14588041-14588266,14588835-14589001,14589880-145900... 27 9.5 03_05_0310 + 23008915-23009841,23010401-23011162 27 9.5 >05_03_0373 - 13194723-13195847,13196219-13196809 Length = 571 Score = 31.1 bits (67), Expect = 0.77 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -2 Query: 470 VSEFGGTWFQLRR*WRVETRGVIDFDLRCSAR 375 V+E G + QL+R WR + RG++D D R R Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533 >05_06_0034 + 25082875-25084113 Length = 412 Score = 30.7 bits (66), Expect = 1.0 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -2 Query: 230 RMRIKVPEGLMSSDVGVL*RWTNLSCEGRHFGKHFYSCAVXG-SSAG 93 R+RI++P G +S + GVL +W FG SC + G SSAG Sbjct: 188 RLRIELPAGELSMEEGVLLKWK------ADFGSTLGSCVILGASSAG 228 >04_03_0102 + 11275656-11275866,11276648-11276811,11276832-11276999, 11277361-11277414 Length = 198 Score = 28.7 bits (61), Expect = 4.1 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 157 DKLVHLHKTPTSLDINPSGTFIRIRGTKSLQQ 252 D+++H + TPT P G RI+G ++ Q Sbjct: 93 DEVLHKYTTPTDTPSTPKGELFRIQGVRTPPQ 124 >08_02_1096 - 24280910-24281195,24281326-24281711 Length = 223 Score = 28.3 bits (60), Expect = 5.4 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 Query: 47 LPTHDWVSSYLTRFAHQRCCXSPHNYKNACQNGAP 151 LP D V+S + H+R SP + C++GAP Sbjct: 45 LPARDAVASMALSWHHRRLITSPDFVRLHCRHGAP 79 >01_03_0163 + 13346586-13347809 Length = 407 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +3 Query: 273 SWAAAIDLLTNDECRLLLEVED 338 SW AA+D +T DE R LLE D Sbjct: 115 SWDAALDGITADEARALLESID 136 >12_01_0572 + 4684050-4684243,4684332-4684426,4684686-4685404 Length = 335 Score = 27.5 bits (58), Expect = 9.5 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Frame = +2 Query: 86 FAHQRCCXSPHNYKNACQNGAPHRTS*SIFTKHQHH*TSIPLALLFAF-VELNHYNNECE 262 F ++ P K + GA R + KH +H I LA + A VE+NH +E Sbjct: 242 FYNKHVIKVPKMDKEVNERGASTRRRHKVTNKHYYH-VEIYLAAIDAILVEMNHRFSEVS 300 Query: 263 SE 268 SE Sbjct: 301 SE 302 >07_03_0163 + 14588041-14588266,14588835-14589001,14589880-14590068, 14590193-14590315,14590531-14590793,14590882-14590976, 14591529-14591965,14592461-14592481 Length = 506 Score = 27.5 bits (58), Expect = 9.5 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +2 Query: 113 PHNYKNACQNGAPHRTS*SIFTKHQHH*TSIPLALLFAF-VELNHYNNECESE 268 P K + G R ++ KH +H I LA + A VE+NH+ +E SE Sbjct: 415 PKMDKEVNERGTSTRRRHNVTNKHYYH-VEIYLAAIDAILVEMNHHFSEVSSE 466 >03_05_0310 + 23008915-23009841,23010401-23011162 Length = 562 Score = 27.5 bits (58), Expect = 9.5 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = +1 Query: 157 DKLVHLHKTPTSLDINPSGTFIRIRGTKS 243 D+++H + TPT+ P G RI+G ++ Sbjct: 412 DEVLHKYTTPTATPSTPKGERFRIQGVRT 440 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,565,856 Number of Sequences: 37544 Number of extensions: 265340 Number of successful extensions: 544 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 544 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1573040476 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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