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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_M14
         (378 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p...    46   3e-06
SPBC13A2.01c |||nuclear cap-binding complex small subunit|Schizo...    44   8e-06
SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr ...    41   6e-05
SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces po...    40   1e-04
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc...    39   2e-04
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei...    38   4e-04
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces...    38   7e-04
SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|ch...    38   7e-04
SPBC428.12c |||RNA-binding protein|Schizosaccharomyces pombe|chr...    38   7e-04
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy...    37   0.001
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce...    36   0.002
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||...    36   0.002
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce...    36   0.003
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch...    35   0.004
SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual      34   0.006
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc...    33   0.011
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po...    33   0.011
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ...    33   0.020
SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein Msa1|Schizosa...    33   0.020
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M...    33   0.020
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p...    32   0.026
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ...    32   0.034
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr...    31   0.079
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr...    30   0.10 
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce...    29   0.18 
SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomy...    29   0.18 
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po...    28   0.56 
SPBC21C3.06 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    27   0.74 
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi...    26   1.7  
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha...    25   3.9  
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz...    25   5.2  
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos...    24   9.1  
SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual         24   9.1  

>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 517

 Score = 45.6 bits (103), Expect = 3e-06
 Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
 Frame = +1

Query: 133 DLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDAED 297
           D   K+Y+ NL  N  + ++ ++   +G++ +  + +N       GF F EF++P DAE 
Sbjct: 307 DSKDKIYISNLPLNLGEDQVVELLKPFGDLLSFQLIKNIADGSSKGFCFCEFKNPSDAEV 366

Query: 298 SVRGLDG 318
           ++ GLDG
Sbjct: 367 AISGLDG 373


>SPBC13A2.01c |||nuclear cap-binding complex small
           subunit|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 182

 Score = 44.0 bits (99), Expect = 8e-06
 Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDPRDAEDSVRGL 312
           VYVGNL    ++ +I  +FSK G IR + +      + P GF FVE+ + +DA DS++ +
Sbjct: 34  VYVGNLSFYTTEEQIYALFSKCGEIRRIIMGVDRFTKTPCGFCFVEYFENQDALDSLKYI 93

Query: 313 DGT 321
             T
Sbjct: 94  SRT 96


>SPAC644.16 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 422

 Score = 41.1 bits (92), Expect = 6e-05
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
 Frame = +1

Query: 139 SCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDPRDAEDSV 303
           SC VYVGN+    ++ ++  IF + G +++  +     +  P G+ F E+ DP  A  +V
Sbjct: 4   SCVVYVGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAV 63

Query: 304 RGLD 315
           R L+
Sbjct: 64  RNLN 67


>SPAC16.02c |srp2||mRNA export factor Srp2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 365

 Score = 39.9 bits (89), Expect = 1e-04
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = +1

Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 324
           +++VG +   A++ ++   F  YG I +  +     GF FVE ED RDA D V    G  
Sbjct: 5   RLFVGRIPPQATREDMMDFFKGYGQILDCKLMN---GFGFVEVEDARDARDIVNDFQGKE 61

Query: 325 CCGT 336
             G+
Sbjct: 62  FMGS 65


>SPAC328.05 |||RNA-binding protein involved in export of
           mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 434

 Score = 39.1 bits (87), Expect = 2e-04
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPG----FAFVEFEDPRDAEDSVRGLD 315
           +YVGNL    S   +  +F+  G++    +A  P G    F  V+FE+  DA  S+  L+
Sbjct: 282 IYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEPTGRSKGFGVVQFENENDAASSIEKLN 341

Query: 316 GTRCCG 333
           G R  G
Sbjct: 342 GYRYGG 347



 Score = 34.3 bits (75), Expect = 0.006
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = +1

Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGF----AFVEFEDPRDAEDSVRGL 312
           +VYVGNL      +E+ +   + GN+ N  +   P G     A +E+    +A  +++ L
Sbjct: 67  RVYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAIKTL 126

Query: 313 DGTRCCG 333
              +  G
Sbjct: 127 SNQKFMG 133


>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
           Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 348

 Score = 38.3 bits (85), Expect = 4e-04
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
 Frame = +1

Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN---------PPGFAFVEFEDPRDAED 297
           +V+VG L T+  K EI  +F   G +R V +            P G AFV F +  D + 
Sbjct: 45  RVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDK 104

Query: 298 SVRGLDG 318
           ++  L+G
Sbjct: 105 AIETLNG 111


>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 609

 Score = 37.5 bits (83), Expect = 7e-04
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
 Frame = +1

Query: 142 CKVYVGNLGTN--ASKYEIXKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAEDS 300
           C ++V NL  N   +  ++ ++FSK+G I++  +A  P      G+ FV F  P +A  +
Sbjct: 419 CNLFVKNLDDNIVGNTQQLEELFSKFGRIKSCTLASYPSTEISKGYGFVSFSHPFEAVQA 478

Query: 301 VRGLDG 318
           +  L+G
Sbjct: 479 INTLNG 484



 Score = 34.3 bits (75), Expect = 0.006
 Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 10/68 (14%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWV----------ARNPPGFAFVEFEDPRDAED 297
           +YVGNL +     ++ ++F  +GN     +          +++P  FAF+ FE+   A++
Sbjct: 22  IYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSADN 81

Query: 298 SVRGLDGT 321
           ++  L+G+
Sbjct: 82  AIASLNGS 89


>SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 661

 Score = 37.5 bits (83), Expect = 7e-04
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFE 276
           +YV NL    S   I  +FS YGN++++W+  +P   A V +E
Sbjct: 2   LYVSNLPVGTSSSAIHALFSAYGNVKDIWML-SPDNSAIVSYE 43


>SPBC428.12c |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 116

 Score = 37.5 bits (83), Expect = 7e-04
 Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPG----FAFVEFEDPRDAEDSVRGLD 315
           V+VGNL  + ++  +   F  +G I +V + R        +AFVEF++P DA++++  ++
Sbjct: 8   VHVGNLAPSVTESLLYNAFIPFGEIISVALHRKEKAVDRSYAFVEFDEPEDAKEAMENMN 67

Query: 316 GTRCC 330
            +  C
Sbjct: 68  YSILC 72


>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 654

 Score = 36.7 bits (81), Expect = 0.001
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = +1

Query: 139 SCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGL 312
           S  V++GNL ++  + EI + F K+G I ++ +  +    AFV F + RDA   VR L
Sbjct: 298 SRNVFIGNLPSSYHEKEIEEAFGKFGKIEHIKIL-SKKNIAFVHFLNIRDAIKVVRTL 354


>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 297

 Score = 36.3 bits (80), Expect = 0.002
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = +1

Query: 133 DLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAED 297
           +L   ++V  + +   + E+ +IFSK+G + +V + R P      GF F+ F    +A  
Sbjct: 98  NLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATS 157

Query: 298 SVRGLDGTRCCGTXNSCRNVKLGPP 372
           ++  L+     G   + +  K   P
Sbjct: 158 AIDNLNSQEFYGRVLNVQKAKRSRP 182


>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 710

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +1

Query: 133 DLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVW 234
           D S  +YVGN+ +  S  EI K FSKYG + +++
Sbjct: 14  DESSTIYVGNIDSRLSDEEIIKHFSKYGQVESIF 47


>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 217

 Score = 35.5 bits (78), Expect = 0.003
 Identities = 18/62 (29%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
 Frame = +1

Query: 115 SRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN-----PPGFAFVEFED 279
           S ++++  S  +Y+GNL  + ++ +I  +FS++G   ++ + R+       GFAF+++ED
Sbjct: 22  SWHQDYSDSAYIYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKGFAFLKYED 81

Query: 280 PR 285
            R
Sbjct: 82  QR 83


>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 219

 Score = 35.1 bits (77), Expect = 0.004
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
 Frame = +1

Query: 127 EWDLS-CKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN----PPGFAFVEFED 279
           EWD +  +++VGNLG + +   + + FS+Y ++    V R+      GF FV F+D
Sbjct: 24  EWDPNHFRLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKD 79


>SPBC16E9.12c |pab2||poly|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 166

 Score = 34.3 bits (75), Expect = 0.006
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDP 282
           VYVGN+  + +  E+   F+  G++  V +       +P GFA++EF +P
Sbjct: 57  VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEP 106


>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 438

 Score = 33.5 bits (73), Expect = 0.011
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNP-----PGFAFVEFED 279
           V+VGNL   A +  + + F   G+I  V + R+P      GFA+++F+D
Sbjct: 272 VFVGNLAFEAEEEPLWRYFGDCGSIDYVRIVRDPKTNLGKGFAYIQFKD 320


>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 833

 Score = 33.5 bits (73), Expect = 0.011
 Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
 Frame = +1

Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDPRDAEDSVRG 309
           ++++ NL  + ++ ++  +F  +G +  V +       NP GFA+++F D  DA  +   
Sbjct: 324 RLFLRNLTYSCAEDDLKSLFGPFGQLEQVHMPIDKKTNNPKGFAYIDFHDADDAVRAYLE 383

Query: 310 LD 315
           LD
Sbjct: 384 LD 385



 Score = 27.5 bits (58), Expect = 0.74
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKY-GNIRNVWVARNPP---------GFAFVEFEDPRDAED 297
           +YV NL  +  + E  K+F    G +  V  A+  P         GF FVEF+D   A  
Sbjct: 621 IYVKNLNFSTKQEEFQKVFKPLEGYLSAVIRAKPDPKRPGKYLSMGFGFVEFKDKASAVA 680

Query: 298 SVRGLDG 318
           ++  ++G
Sbjct: 681 AMHAMNG 687


>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 674

 Score = 32.7 bits (71), Expect = 0.020
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +1

Query: 202 FSKYGNIRNVWVARNPPG----FAFVEFEDPRDAEDSVRGLDGTRCCG 333
           FSK+G +R + +     G    FAFV  +D + AE+++  L+GT   G
Sbjct: 128 FSKFGKVREIKIPTKGGGRMCGFAFVWMKDRKAAEEAMNSLNGTEIDG 175


>SPAC13G7.13c |msa1|SPAC6C3.01c|RNA-binding protein
           Msa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 533

 Score = 32.7 bits (71), Expect = 0.020
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +1

Query: 148 VYVGNLG-TNASKYEIXKIFSKYGNIRNVWVAR--NPPGFAFVEFEDPRDAEDSVRG 309
           ++VG L   N + Y +  +FSKYG + +  +      P FAF+ F+  + A  +V G
Sbjct: 367 IFVGQLDPVNCTHYLLVDLFSKYGKVIDCKIIHQSKKPAFAFLRFDSQQAAYAAVCG 423


>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 500

 Score = 32.7 bits (71), Expect = 0.020
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
 Frame = +1

Query: 139 SCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWV-----ARNPPGFAFVEFEDPRDAEDSV 303
           +C V+VG L  N     + + F +YG I    V     +    G+ +V+FE P  A+ +V
Sbjct: 262 TCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKAAV 321

Query: 304 RGLDGTR 324
              +GT+
Sbjct: 322 -AANGTK 327


>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 275

 Score = 32.3 bits (70), Expect = 0.026
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = +1

Query: 256 FAFVEFEDPRDAEDSVRGLDGTR 324
           FAFVE+ED RDAED+   + G R
Sbjct: 49  FAFVEYEDSRDAEDAYYEVHGRR 71


>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 561

 Score = 31.9 bits (69), Expect = 0.034
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFS-KYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 318
           +YVGNL  + S+ E+  +FS + G  R  +  +      FVEFE+   A ++++ L G
Sbjct: 428 IYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTKGNGPMCFVEFENIPYAMEALKNLQG 485


>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 233

 Score = 30.7 bits (66), Expect = 0.079
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
 Frame = +1

Query: 100 LKTKMSRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPP-----GFAF 264
           LK+K  + +  D    ++VGNL  ++S   +   F + G + +V +  +       G+AF
Sbjct: 78  LKSKRQKGKNNDRKVILFVGNLPKDSSVETLQLHFKRAGQVPSVRIPTDKTSGRQKGYAF 137

Query: 265 VEFEDPR 285
           VEF +P+
Sbjct: 138 VEFINPK 144


>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 1060

 Score = 30.3 bits (65), Expect = 0.10
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 324
           ++VGNL +  S   +   FS YG + ++ +  +    AF+ F+    A+  +  L+G R
Sbjct: 589 LWVGNLPSGVSATTVATTFSAYGTVSSIRMLSHKHS-AFLNFDSVETAKHVLEELNGKR 646


>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 604

 Score = 29.5 bits (63), Expect = 0.18
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 208 KYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGL 312
           KYG + ++ V  N  G  FV+FE+   AE ++ GL
Sbjct: 540 KYGKVVHIAVVPNELGQIFVKFENADFAEKAITGL 574


>SPBP16F5.06 |||ribosome biogenesis protein Nop6|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 478

 Score = 29.5 bits (63), Expect = 0.18
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
 Frame = +1

Query: 133 DLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVAR--NPPG----FAFVEFEDPRD 288
           +L  ++YVG L ++    ++   FS++G++ N+ +     P G    FA++ F    D
Sbjct: 2   ELEKRIYVGGLSSSIESSDLESRFSRFGSVSNLEIINKSTPVGTIQRFAYLNFRTDED 59


>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1014

 Score = 27.9 bits (59), Expect = 0.56
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +1

Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVAR---NPPGFAFVEFEDPRDAEDSV 303
           ++YV N+    ++ ++   F  YG + +V + +      GF +V     +DAE+++
Sbjct: 758 ELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENAL 813



 Score = 27.1 bits (57), Expect = 0.98
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVA----RNPPGFAFVEFEDPRDAEDSVR 306
           +YV N      + +I K+FS YGN+ +V            F +V+   P +A ++++
Sbjct: 668 LYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQ 724


>SPBC21C3.06 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 122

 Score = 27.5 bits (58), Expect = 0.74
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +2

Query: 104 KLRCLATENGIFLAKCT---WATWVLMRLNMKXKKYF 205
           KL  +AT + IF    +   W+TWVL R  +K   +F
Sbjct: 5   KLANVATVDAIFAISSSTFLWSTWVLQRTILKRPNFF 41


>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
           Urb1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1568

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 76  IIFIHPFQLKTKMSRYREWDLSC 144
           ++  H     TK+S + EW LSC
Sbjct: 179 VLLDHDVSRATKLSYFNEWSLSC 201


>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 276

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
 Frame = +1

Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN-----PPGFAFVEFE 276
           +YVG L     + ++   FS++G +  + ++RN        +AF+EFE
Sbjct: 107 LYVGRLPHGFYEKQMRMYFSQFGPVLRLRMSRNRKTGSSKHYAFIEFE 154


>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 873

 Score = 24.6 bits (51), Expect = 5.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 125 ENGIFLAKCTWATWVLMRLNMK 190
           +NGI L   +W TW+  +  +K
Sbjct: 326 DNGIRLENASWRTWMKHKFKLK 347


>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 731

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 138 KIPFSVARHLSFELKRVDKNYSQ 70
           K P SV+R+  FE K    NYS+
Sbjct: 601 KFPNSVSRNTHFESKSPHPNYSR 623


>SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 130

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -1

Query: 279 VFEFYKCKSGRISSYPYVTYV 217
           V  FY  K GRIS    +TYV
Sbjct: 96  VIAFYSFKDGRISLIDELTYV 116


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,562,460
Number of Sequences: 5004
Number of extensions: 27903
Number of successful extensions: 116
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 122233080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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