Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M14
(378 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 1e-20
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 93 9e-20
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 9e-20
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 68 3e-12
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 52 1e-07
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 47 6e-06
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 46 1e-05
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 2e-05
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-05
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 5e-05
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 43 7e-05
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 40 5e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 5e-04
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 39 0.001
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 38 0.002
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 38 0.004
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.005
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 36 0.008
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 36 0.008
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.011
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 36 0.014
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.058
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 33 0.077
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 33 0.10
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 33 0.10
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.13
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.18
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.31
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 31 0.41
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.41
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 31 0.41
SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026) 31 0.41
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 30 0.54
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 30 0.72
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 0.72
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.72
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.95
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.95
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 29 0.95
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 29 1.3
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 28 2.2
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 28 2.9
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 27 3.8
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19) 27 6.7
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 27 6.7
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 26 8.8
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 26 8.8
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 26 8.8
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 95.5 bits (227), Expect = 1e-20
Identities = 45/78 (57%), Positives = 54/78 (69%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 324
+VY+GN+G NASK EI + F +G +R+VWVARNPPGFAF FED RDAED+VR LDG
Sbjct: 3 RVYIGNIGDNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVRELDGRY 62
Query: 325 CCGTXNSCRNVKLGPPKG 378
CG K GP +G
Sbjct: 63 ICGQRARVELAK-GPSRG 79
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 92.7 bits (220), Expect = 9e-20
Identities = 39/65 (60%), Positives = 49/65 (75%)
Frame = +1
Query: 136 LSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 315
++ K+YVGNLG NA E+ + F K+G + VWVARNPPGFAFVE+ED RDAE++VR LD
Sbjct: 2 MTTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELD 61
Query: 316 GTRCC 330
G C
Sbjct: 62 GANVC 66
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 92.7 bits (220), Expect = 9e-20
Identities = 45/78 (57%), Positives = 53/78 (67%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 324
KVY+G+LG NASK EI F YG +++VWVARNPPGFAF F+D RDAED+VR LDG
Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRY 92
Query: 325 CCGTXNSCRNVKLGPPKG 378
CG K GP +G
Sbjct: 93 ICGQRVRVELAK-GPSRG 109
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 67.7 bits (158), Expect = 3e-12
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +1
Query: 100 LKTKMSRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNP---PGFAFVE 270
+ + M+R D C+VYVGNL + + ++ IF KYG+I +V + P FAFVE
Sbjct: 249 MSSNMNRSNSND--CRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVE 306
Query: 271 FEDPRDAEDSVRGLDG 318
FEDPRDAED+V+G DG
Sbjct: 307 FEDPRDAEDAVKGRDG 322
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 52.4 bits (120), Expect = 1e-07
Identities = 23/66 (34%), Positives = 40/66 (60%)
Frame = +1
Query: 136 LSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 315
++C+VY+G L ++ ++ + F YG +R++ + N + FVEFED RDA+D+V +
Sbjct: 1 MNCRVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN---YGFVEFEDDRDADDAVYECN 57
Query: 316 GTRCCG 333
G G
Sbjct: 58 GKEMLG 63
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 46.8 bits (106), Expect = 6e-06
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRG 309
K+YV +L N +K + +IFS YG ++ V + + GFA+VE+ DP + E +++
Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKH 1217
Query: 310 LDGTRCCGTXNSCRNVKLGPPK 375
+DG + G + ++V PP+
Sbjct: 1218 MDGGQIDGQEIAVQSVL--PPR 1237
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 46.0 bits (104), Expect = 1e-05
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +1
Query: 100 LKTKMSRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNP-----PGFAF 264
L+T + R L C+VYVG++ + I F +G I + ++ +P GFAF
Sbjct: 88 LQTAAQKQRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAF 147
Query: 265 VEFEDPRDAEDSVRGLDGTRCCGTXNSCRNVKLGPP 372
VE++ P A+ ++ ++G G RN+K+G P
Sbjct: 148 VEYDLPEAAQLALEQMNGVLLGG-----RNIKVGRP 178
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 44.8 bits (101), Expect = 2e-05
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +1
Query: 139 SCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 318
S +VY G L + + ++ K YG +R + + G+ FVEF+D RDA+D V L+G
Sbjct: 4 STRVYFGRLPRDCRERDLEKFVRGYGRVREISMKL---GYGFVEFDDYRDADDCVYDLNG 60
Query: 319 TRCCG 333
G
Sbjct: 61 RNLLG 65
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 44.4 bits (100), Expect = 3e-05
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Frame = +1
Query: 106 TKMSRYREWDLS----CKVYVGNLGTNASKYEIXKIFSKYGNIRNVWV-----ARNPPGF 258
+++ +Y +DL CK Y+GNL ++ ++ FS+Y ++ +V V + P GF
Sbjct: 214 SRLLKYSYFDLKMGEECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGF 272
Query: 259 AFVEFEDPRDAEDSVRGLDG 318
AFV F ++ ED++ LDG
Sbjct: 273 AFVTFGSKKNMEDAINELDG 292
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 43.6 bits (98), Expect = 5e-05
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Frame = +1
Query: 127 EWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDA 291
E D + V NL + ++ ++F KYG++ ++++ R+ GFAFV F + RDA
Sbjct: 11 EIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDA 70
Query: 292 EDSVRGLDGT 321
ED++ +D T
Sbjct: 71 EDAMDCMDAT 80
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 43.6 bits (98), Expect = 5e-05
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Frame = +1
Query: 100 LKTKMSRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN----PPGFAFV 267
L+ K S++ ++V NL +A + EI ++FSK+G ++ V + N P G+ +V
Sbjct: 157 LRDKFSKFPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYV 216
Query: 268 EFEDPRDAEDSVRGLDGTRCCGTXNSCR----NVKLGPPK 375
E+E A +V LD T G S + GPP+
Sbjct: 217 EYEQESSASTAVLTLDKTEVKGRTISVALSNPPTRRGPPR 256
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 187 EIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCG 333
++ K YG IR++ + R G+ FVEF+D RDAED+V L+G G
Sbjct: 704 DVEKFLRGYGKIRDISLKR---GYGFVEFDDHRDAEDAVHDLNGRDLIG 749
Score = 33.1 bits (72), Expect = 0.077
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 327
V V NL + S ++ F KYG + + G VEFE D ++ LD T
Sbjct: 800 VIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEKLDDTEL 859
Query: 328 CG 333
G
Sbjct: 860 GG 861
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 40.3 bits (90), Expect = 5e-04
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNP----PGFAFVEFEDPRDAEDSVRGLD 315
VYV N G + ++ +I ++ G I ++ V +P GF FV FE P +AE++V L+
Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170
Query: 316 GTRCCG 333
G G
Sbjct: 171 GKEIGG 176
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 40.3 bits (90), Expect = 5e-04
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGL 312
VYVGNL + + ++ K+F +YG + V + R+ G AF+ F D + A+++V +
Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71
Query: 313 DGTRCCGTXNSCRNVK 360
+ + G C K
Sbjct: 72 NKKQMFGRTIKCTIAK 87
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 39.5 bits (88), Expect = 9e-04
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN--------PPGFAFVEFEDPRDAEDS 300
K+++GNL S++ I KI ++G I + + P G+ FVEF+ DA +
Sbjct: 388 KLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKA 447
Query: 301 VRGLD 315
+RGL+
Sbjct: 448 LRGLN 452
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/55 (30%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 142 CKVYVGNLGTN-ASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSV 303
C++++GNL T+ ++ ++ +IFS++G + + N F FV+FE + A+++V
Sbjct: 46 CRIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHAN---FGFVQFETEKGADEAV 97
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +1
Query: 136 LSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 315
+S +VY+G L + ++ K F YG + + G+ FVEF+ DAED+V +
Sbjct: 1 MSNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKD-GYGFVEFDYSDDAEDAVYECN 59
Query: 316 GTRCCG 333
G + G
Sbjct: 60 GKKMLG 65
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAEDSVRGL 312
++V N+ A + +I ++FS YG I+N+ V + G+A VE+E ++A+ ++ L
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 313 DGTRCCG 333
+G G
Sbjct: 355 NGAEMLG 361
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Frame = +1
Query: 103 KTKMSRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN-----PPGFAFV 267
KT+M++ + D+ K++VG L +K + + FSKYG + V + + P GFAFV
Sbjct: 19 KTRMTK--DDDIG-KLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFV 75
Query: 268 EFEDPRDAE 294
+F+ +A+
Sbjct: 76 QFKHQSEAD 84
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 37.5 bits (83), Expect = 0.004
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 324
+++VG L ++ +F YG + + + F+E+EDPRDAE+++R + +
Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT---AYGFIEYEDPRDAEEAMRRENNRK 63
Query: 325 CCGTXNSCRNVKLG 366
G+ V+ G
Sbjct: 64 LFGSRIVVEYVRSG 77
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 37.1 bits (82), Expect = 0.005
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +1
Query: 136 LSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFV 267
L+ VYVGNL + YE+ ++FS+YG+I V + G+AF+
Sbjct: 613 LNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD-KGYAFI 655
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = +1
Query: 115 SRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPG---FAFVEFEDPR 285
+RY + + +YVGNL ++ I IF+K + + +P + FVEFE
Sbjct: 360 ARYFPEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHA 419
Query: 286 DAEDSVRGLD 315
DA+++ +D
Sbjct: 420 DAQEAKFRMD 429
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 36.3 bits (80), Expect = 0.008
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +1
Query: 136 LSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 315
+S KVY G L A++ ++ + +G +R V G+A+V F++ +DA+ +V L+
Sbjct: 1 MSGKVYCGRLPATATEKDLENLVKVFGKVREVDFKE---GYAYVVFKENKDADRAVAALN 57
Query: 316 GTRCCG 333
+ G
Sbjct: 58 NSEFHG 63
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYG---NIRNVW--VARNPPGFAFVEFEDPRDAEDSVRGL 312
V+VGN+ AS+ ++ +IFS+ G + R V+ P G+ F E++D A ++R L
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86
Query: 313 DG 318
+G
Sbjct: 87 NG 88
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 35.9 bits (79), Expect = 0.011
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Frame = +1
Query: 142 CKVYVGNLGTNASKYEIXKIFSKYGNIRNV-----WVARNPPGFAFVEFEDPRDAEDSVR 306
C +YV N+G +A++ I +F + G + V W + GF FV +A+++++
Sbjct: 275 CTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQ 334
Query: 307 GLDG 318
L+G
Sbjct: 335 TLNG 338
Score = 34.7 bits (76), Expect = 0.025
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDAEDSVRGL 312
+YV N+ + E K F YGNI N + R+ P G FV ++ +A+ ++ L
Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSL 194
Query: 313 DGT 321
GT
Sbjct: 195 SGT 197
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 35.5 bits (78), Expect = 0.014
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +1
Query: 127 EWDLS-CKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRD 288
+WD + +++ G+LG+ + + + F+KY + + R+ G+ FV F+DP D
Sbjct: 211 QWDPNDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPND 270
Query: 289 AEDSVRGLD 315
++R ++
Sbjct: 271 FIKAMREMN 279
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 33.5 bits (73), Expect = 0.058
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYG-NIRNVWVARNPP------------GFAFVEFEDPR 285
KVY GNL ++ E+ +F + +V + + P GF FV F +P
Sbjct: 51 KVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPE 110
Query: 286 DAEDSVRGLDGTRCCGTXNSCRNVKLGP 369
DA+ +V+ L+G G R +K+ P
Sbjct: 111 DAQTAVKSLNGKEVQG-----RTLKIAP 133
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 33.1 bits (72), Expect = 0.077
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 127 EWDLSCK--VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPG--FAFVEFEDPRDAE 294
E+D C ++VGN+ + ++ + F +YG + +V + + P +AFV+F + A
Sbjct: 242 EFDPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAI 301
Query: 295 DSVRGLD 315
+ R +D
Sbjct: 302 QARRKMD 308
Score = 32.3 bits (70), Expect = 0.13
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWV--ARNPPG--FAFVEFEDPRDA 291
++VGNL N + +I K F++YG + +V + R+ G +FV+F D R A
Sbjct: 8 LWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFVDIRSA 59
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 32.7 bits (71), Expect = 0.10
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 318
+YV N+ S+ ++ +F+KYG I V R+ + FV F A ++ G++G
Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRD---YGFVYFAKRESAVQAIDGING 57
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 32.7 bits (71), Expect = 0.10
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +1
Query: 199 IFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 318
+FS++GN+ +VW+ + F + +F + A+ +++GL G
Sbjct: 357 VFSRFGNLIDVWMMKE-RNFGYAKFAAKQSADAAIQGLHG 395
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 32.7 bits (71), Expect = 0.10
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +1
Query: 100 LKTKMSRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVAR----NPPGFAFV 267
++ +M++ +E D + +Y+ NL N + + +FSKYG + + + R N G F
Sbjct: 166 IQAQMAKQQEQDPT-NLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNSKGVGFA 224
Query: 268 EFEDPRDAEDSVR 306
E E ++
Sbjct: 225 RMESAEKCEQVIK 237
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGL 312
+Y+ L N + ++ ++ KYG I + + G+ FV+FE P A+ +V L
Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAAL 161
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 32.3 bits (70), Expect = 0.13
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 97 QLKTKMSRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNI 222
++ +S+Y+ CKV+VGN+G E+ F +G++
Sbjct: 64 EVSKDISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDV 105
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 31.9 bits (69), Expect = 0.18
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +1
Query: 190 IXKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGLDGTRCCGT 336
I ++FS+ GN+ VA NP GFAFV++ +AE R +G + G+
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGS 275
Score = 29.5 bits (63), Expect = 0.95
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVAR-----NPPGFAFVEFEDPRDAEDSVRGL 312
++VGNL ++ + + S YGNI +++ R + G+ FVE+ +A + + L
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 313 DGT 321
T
Sbjct: 175 LNT 177
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 31.1 bits (67), Expect = 0.31
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXK----IFSKYGNIRNVWVARNPP--GFAFVEFEDPRDAEDSVRG 309
+Y+ NL K E+ K IFS++G I ++ + G AFV F+D A +++R
Sbjct: 9 IYIKNLNEKIKKEELKKSLYAIFSQFGPILDIVALKTLKMRGQAFVVFKDIGSATNALRS 68
Query: 310 LDG 318
+ G
Sbjct: 69 MQG 71
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 327
+++ NL ++ + +F+++ + V + +FVEFE+ A + L G R
Sbjct: 169 LFLTNLPMETTELMLSMLFNQFPGFKEVRLVPGRSDISFVEFENEVQAGTAKDALQGFRI 228
Query: 328 CGT 336
T
Sbjct: 229 TPT 231
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 30.7 bits (66), Expect = 0.41
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNV 231
V+VGNL K + K FSKYG + +V
Sbjct: 23 VFVGNLPLTLKKKALKKYFSKYGEVESV 50
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 30.7 bits (66), Expect = 0.41
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPG----FAFVEFEDPRDAEDSVRGLD 315
++VGNL T S ++ F K+G + +V + R G +AFV+F D A + +
Sbjct: 239 LFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKCAMQ 298
Query: 316 GTRCCG 333
G +C G
Sbjct: 299 G-QCIG 303
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 30.7 bits (66), Expect = 0.41
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = +1
Query: 133 DLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRDAEDS 300
D+S +++V ++ E+ F +YG ++ + R+ G+AF+ FE ++ D
Sbjct: 5 DISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFES-QEVADG 63
Query: 301 VR---GLD 315
+R GLD
Sbjct: 64 LRDNKGLD 71
>SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026)
Length = 284
Score = 30.7 bits (66), Expect = 0.41
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 190 IXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 318
I +F YGN+ V N PG V+ D +E +R L G
Sbjct: 231 IFNLFCLYGNVIKVKFLTNKPGACMVQMSDKIASEMIIRNLSG 273
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 30.3 bits (65), Expect = 0.54
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 139 SCKVYVGNLGTNASKYEIXKIFSKYGNIRNV 231
S +V++GNL + ++ ++FSKYG I +
Sbjct: 356 SHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 29.9 bits (64), Expect = 0.72
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAEDSVRGL 312
+YVG L S+ I ++F + G + NV + ++ G+ FVEF DA+ +++ +
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74
Query: 313 DGTRCCG 333
+ + G
Sbjct: 75 NMIKVYG 81
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 29.9 bits (64), Expect = 0.72
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 157 GNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 318
G L + I ++FS YG + V V ++FV ++ +A +++R L+G
Sbjct: 55 GGLMCGVDRESITRVFSLYGTLERV-VMLPQRSYSFVSYKSHNNALNAMRNLNG 107
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.9 bits (64), Expect = 0.72
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGT 321
++V L A+ + K+FS YG I N+ + + G+ FV + +A ++ L+GT
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIEL-KLDKGYGFVNMSNYEEACHAICCLNGT 330
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 29.5 bits (63), Expect = 0.95
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +1
Query: 127 EWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEF 273
E ++ K++VG L + ++ + + F+++G + +V++ + F FV F
Sbjct: 194 ELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFVTF 242
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 29.5 bits (63), Expect = 0.95
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 238 ARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCG 333
A P G+AF+E+E RD + + DG + G
Sbjct: 43 ASKPRGYAFIEYEHERDMHAAYKHADGKKIDG 74
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 29.5 bits (63), Expect = 0.95
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 190 IXKIFSKYGNIRNVWVAR-----NPPGFAFVEFEDPRDAEDSVR 306
+ K+FS++G + V + R GFAF+EFE + AE V+
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQ 147
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Frame = +1
Query: 169 TNASKYEIXKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPR 285
T AS + + F K+G ++ V R+P GF F+ F+DP+
Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPK 160
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVAR----NPPGFAFVEFEDPRDAEDSVRGLD 315
+Y+ + + K + +F YG I ++ + R GF +V +E +AE + R L
Sbjct: 65 IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIRTQTGKSKGFGYVTYE---NAESAQRALA 121
Query: 316 GT 321
GT
Sbjct: 122 GT 123
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPP-----GFAFV 267
K+Y+GNL N+ + EI + F ++G + V + R+ GF FV
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFV 54
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +1
Query: 151 YVGNLGTNASKYEIXKIFSKYGNIRNV-----WVARNPPGFAFVEFEDPRDAEDSVRGLD 315
YVG L + + F +G+I +V + GF FVEFE D ++ ++
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 316 GTRCCG 333
+ G
Sbjct: 68 ESELFG 73
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 27.5 bits (58), Expect = 3.8
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +1
Query: 85 IHPFQLKTKM-SRYREWDLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN----- 246
I F ++ + S + D V++GNL + + + ++F+ GN+ +V + R+
Sbjct: 36 IDGFHIRVDLASNDKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGI 95
Query: 247 PPGFAFVEFEDPRDA 291
GF +V FE +DA
Sbjct: 96 GKGFGYVLFES-KDA 109
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 327
VY+ NL + ++ ++ + +S+YG + V + +AFV F + A ++ DG
Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRV---KKLKDYAFVHFTERDHALKAIEETDGKEM 387
Query: 328 CG 333
G
Sbjct: 388 DG 389
Score = 26.2 bits (55), Expect = 8.8
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +1
Query: 145 KVYVGNLGTNASKYEIXKIFSKYGN-IRNVWVARNPP------GFAFVEFEDPRDAEDSV 303
+++VG++ SK EI + FSK N + +V V + GFAF+E+E + A +
Sbjct: 234 RLFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQKGKNRGFAFLEYESHQAASLAR 293
Query: 304 RGLDGTR 324
R L R
Sbjct: 294 RRLASGR 300
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Frame = +1
Query: 133 DLSCKVYVGNLGTNASKYEIXKIFSKYGNIRNVWV-----ARNPPGFAFVEFED 279
D K++VG L + + + F YG + +V V + GF +V F D
Sbjct: 11 DPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFAD 64
>SB_44482| Best HMM Match : RRM_1 (HMM E-Value=0.19)
Length = 486
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWV 237
VYVG + K ++ + F KYG I V V
Sbjct: 372 VYVGKISDETHKDDVWRRFRKYGPIEKVTV 401
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 26.6 bits (56), Expect = 6.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 142 CKVYVGNLGTNASKYEIXKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRDAEDSVRG 309
C+V+VG + + + E+ +F G I V + + G+AFV + DA+ V+
Sbjct: 74 CEVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKT 133
Query: 310 LD 315
L+
Sbjct: 134 LN 135
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 26.2 bits (55), Expect = 8.8
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +1
Query: 148 VYVGNLGTNASKYEIXKIFSKYGNIRNVWVARNPPG-----FAFVEFEDPRDAEDSVRGL 312
++V L + ++ IFS++G I + V R+ +AF+EFE D E + +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 313 D 315
D
Sbjct: 182 D 182
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 26.2 bits (55), Expect = 8.8
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +1
Query: 187 EIXKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGLDG 318
+I F +YG I +VWV ++ G +V+F A + +DG
Sbjct: 38 DIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAALACEEMDG 86
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 26.2 bits (55), Expect = 8.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1
Query: 253 GFAFVEFEDPRDAEDSVRGLDG 318
GF FV E+ D ED R DG
Sbjct: 84 GFGFVTLENQEDLEDVTRKFDG 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,534,035
Number of Sequences: 59808
Number of extensions: 202800
Number of successful extensions: 546
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 632178915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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