Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M13
(651 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B5E0C Cluster: PREDICTED: similar to ENSANGP000... 194 2e-48
UniRef50_Q9VSH4 Cluster: CG7185-PA; n=4; Endopterygota|Rep: CG71... 173 4e-42
UniRef50_Q16630 Cluster: Cleavage and polyadenylation specificit... 144 2e-33
UniRef50_A7SHB1 Cluster: Predicted protein; n=1; Nematostella ve... 116 4e-25
UniRef50_Q8N684 Cluster: Cleavage and polyadenylation specificit... 113 3e-24
UniRef50_Q18937 Cluster: Putative uncharacterized protein; n=2; ... 97 2e-19
UniRef50_UPI000065CB8D Cluster: Homolog of Brachydanio rerio "Cp... 69 7e-11
UniRef50_Q4P6J4 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_A6RC85 Cluster: Predicted protein; n=2; Pezizomycotina|... 59 1e-07
UniRef50_Q00Y64 Cluster: Hydroxymethylpyrimidine kinase; n=3; Os... 54 2e-06
UniRef50_A7P459 Cluster: Chromosome chr1 scaffold_5, whole genom... 54 2e-06
UniRef50_Q54RW5 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q9SAF2 Cluster: F3F19.21 protein; n=1; Arabidopsis thal... 52 9e-06
UniRef50_Q651Z0 Cluster: RNA-binding protein-like; n=4; Oryza sa... 52 2e-05
UniRef50_Q012A5 Cluster: Ps16 protein; n=2; Ostreococcus|Rep: Ps... 52 2e-05
UniRef50_A4RBZ1 Cluster: Putative uncharacterized protein; n=2; ... 52 2e-05
UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1; ... 50 5e-05
UniRef50_Q9FM71 Cluster: Genomic DNA, chromosome 5, P1 clone:MDF... 49 8e-05
UniRef50_A1CJF8 Cluster: RRM domain protein; n=5; Pezizomycotina... 49 8e-05
UniRef50_Q55XW5 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=7... 47 5e-04
UniRef50_UPI000023EAFE Cluster: hypothetical protein FG08870.1; ... 46 8e-04
UniRef50_Q4WWS4 Cluster: RRM domain protein; n=4; Pezizomycotina... 46 8e-04
UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric DNA-... 46 0.001
UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6; Chlorobi... 45 0.001
UniRef50_A3QQP3 Cluster: Chloroplast single strand DNA binding p... 45 0.001
UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast p... 45 0.001
UniRef50_Q43349 Cluster: 29 kDa ribonucleoprotein, chloroplast p... 45 0.001
UniRef50_Q5EUH9 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q8VXC4 Cluster: Glycine rich RNA binding protein; n=20;... 45 0.002
UniRef50_Q10KP0 Cluster: RNA recognition motif family protein, e... 45 0.002
UniRef50_Q9SVM8 Cluster: Glycine-rich RNA-binding protein 2, mit... 44 0.004
UniRef50_Q9SIX3 Cluster: Putative glycine-rich RNA-binding prote... 43 0.006
UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 - Nico... 43 0.006
UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.006
UniRef50_UPI00015B621E Cluster: PREDICTED: hypothetical protein;... 42 0.013
UniRef50_Q531A8 Cluster: FCA gamma; n=1; Pisum sativum|Rep: FCA ... 42 0.013
UniRef50_Q01IS3 Cluster: OSIGBa0128P10.1 protein; n=4; Oryza sat... 42 0.013
UniRef50_Q6C9S9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 42 0.013
UniRef50_Q0V5E5 Cluster: Putative uncharacterized protein; n=2; ... 42 0.013
UniRef50_A1C467 Cluster: RNA binding domain protein; n=1; Asperg... 42 0.013
UniRef50_A2XBX0 Cluster: Putative uncharacterized protein; n=2; ... 42 0.017
UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardi... 42 0.017
UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_P49314 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 41 0.022
UniRef50_Q67JJ7 Cluster: Glycine-rich RNA-binding protein; n=4; ... 41 0.030
UniRef50_A7F6E1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.030
UniRef50_O04240 Cluster: RNA- or ssDNA-binding protein; n=2; Pap... 40 0.039
UniRef50_A2R8K5 Cluster: Contig An16c0230, complete genome; n=2;... 40 0.039
UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10... 40 0.039
UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1; Tre... 40 0.052
UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gb... 40 0.052
UniRef50_A7PZY6 Cluster: Chromosome chr8 scaffold_41, whole geno... 40 0.052
UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, wh... 40 0.052
UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular org... 40 0.068
UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1; Nitros... 40 0.068
UniRef50_P82277 Cluster: Plastid-specific 30S ribosomal protein ... 40 0.068
UniRef50_A2E2A9 Cluster: Eukaryotic translation initiation facto... 39 0.090
UniRef50_Q6BQ88 Cluster: Debaryomyces hansenii chromosome E of s... 39 0.090
UniRef50_Q4WC94 Cluster: Nucleic acid-binding protein; n=2; Tric... 39 0.090
UniRef50_P40565 Cluster: U2 snRNP component IST3; n=5; Saccharom... 39 0.090
UniRef50_Q03250 Cluster: Glycine-rich RNA-binding protein 7; n=1... 39 0.090
UniRef50_Q6C1T7 Cluster: Similar to DEHA0A13563g Debaryomyces ha... 37 0.096
UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamo... 39 0.12
UniRef50_P73557 Cluster: RNA-binding protein; n=2; Chroococcales... 39 0.12
UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1; Op... 38 0.16
UniRef50_A7NXI6 Cluster: Chromosome chr5 scaffold_2, whole genom... 38 0.16
UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Re... 38 0.16
UniRef50_A4HMS6 Cluster: Putative uncharacterized protein; n=3; ... 38 0.16
UniRef50_Q7SET9 Cluster: Predicted protein; n=2; Sordariales|Rep... 38 0.16
UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845 Schizosacch... 38 0.21
UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22; Endopt... 38 0.21
UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6; c... 38 0.28
UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7; Pla... 38 0.28
UniRef50_A0E3P7 Cluster: Chromosome undetermined scaffold_77, wh... 38 0.28
UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein... 38 0.28
UniRef50_A7SV94 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.36
UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 ... 37 0.36
UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_A6GJJ1 Cluster: Probable nucleic acid-binding protein; ... 37 0.48
UniRef50_Q9P3U1 Cluster: RNA-binding protein involved in export ... 37 0.48
UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein... 36 0.64
UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome sh... 36 0.84
UniRef50_Q7MWI3 Cluster: RNA-binding protein; n=5; Bacteroidetes... 36 0.84
UniRef50_Q9ZUJ3 Cluster: T2K10.5 protein; n=3; Magnoliophyta|Rep... 36 0.84
UniRef50_O81989 Cluster: Cp33Hv; n=4; BEP clade|Rep: Cp33Hv - Ho... 36 0.84
UniRef50_A6QZK0 Cluster: Predicted protein; n=1; Ajellomyces cap... 36 0.84
UniRef50_UPI0000499FA7 Cluster: RNA-binding protein; n=2; Entamo... 36 1.1
UniRef50_O97318 Cluster: RNA-binding protein, putative; n=2; Pla... 36 1.1
UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459 ... 35 1.5
UniRef50_Q5ZYW0 Cluster: RNA binding protein, cold-inducible rrm... 35 1.5
UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP... 35 1.5
UniRef50_Q01CD9 Cluster: CwfJ / zinc finger; n=2; Ostreococcus|R... 35 1.5
UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole geno... 35 1.5
UniRef50_A7SMA3 Cluster: Predicted protein; n=3; Nematostella ve... 35 1.5
UniRef50_A4HV49 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit, ... 35 1.5
UniRef50_Q5BD63 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein... 35 1.5
UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1; ... 35 1.9
UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear ribonu... 35 1.9
UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya goss... 35 1.9
UniRef50_A5E562 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_P19683 Cluster: 31 kDa ribonucleoprotein, chloroplast p... 35 1.9
UniRef50_A6GEZ0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_O24306 Cluster: Ribonucleoprotein; n=3; Pisum sativum|R... 34 2.6
UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein; ... 34 2.6
UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:... 34 3.4
UniRef50_Q01JD7 Cluster: OSIGBa0130P02.2 protein; n=7; Poaceae|R... 34 3.4
UniRef50_A7RK53 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.4
UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear ribonu... 34 3.4
UniRef50_Q6CBR2 Cluster: Yarrowia lipolytica chromosome C of str... 34 3.4
UniRef50_A6RQM3 Cluster: Putative uncharacterized protein; n=2; ... 34 3.4
UniRef50_A4RNA8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q6P3S6 Cluster: F-box only protein 42; n=34; Euteleosto... 34 3.4
UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA bindin... 33 4.5
UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8... 33 4.5
UniRef50_Q83D11 Cluster: RNA-binding protein; n=3; Coxiella burn... 33 4.5
UniRef50_Q01Q04 Cluster: RNP-1 like RNA-binding protein; n=1; So... 33 4.5
UniRef50_A0VLS8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recogniti... 33 4.5
UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 4.5
UniRef50_Q6TMI9 Cluster: RNA-binding protein; n=3; Dictyostelium... 33 4.5
UniRef50_Q5DE20 Cluster: SJCHGC05387 protein; n=2; Schistosoma j... 33 4.5
UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,... 33 4.5
UniRef50_Q2UQ21 Cluster: Predicted protein; n=3; Pezizomycotina|... 33 4.5
UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n... 33 4.5
UniRef50_A5DYN8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein, putat... 33 4.5
UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;... 33 4.5
UniRef50_Q9Y388 Cluster: RNA-binding motif protein, X-linked 2; ... 33 4.5
UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;... 33 5.9
UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:... 33 5.9
UniRef50_Q4W5P0 Cluster: Homologous to drosophila sqd (Squid) pr... 33 5.9
UniRef50_A7AW01 Cluster: RNA recognition motif domain containing... 33 5.9
UniRef50_Q6BRG5 Cluster: Similar to CA0922|IPF12991 Candida albi... 33 5.9
UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1; Schizos... 33 5.9
UniRef50_A6R4B0 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 5.9
UniRef50_A4QRR2 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41... 33 5.9
UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding prot... 33 5.9
UniRef50_A4B4X2 Cluster: RNA-binding protein; n=1; Alteromonas m... 33 7.8
UniRef50_A0TAE1 Cluster: Putative uncharacterized protein precur... 33 7.8
UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;... 33 7.8
UniRef50_Q7EY44 Cluster: Water-stress protein-like protein; n=5;... 33 7.8
UniRef50_A4S2D6 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 7.8
UniRef50_A2Y1R0 Cluster: Putative uncharacterized protein; n=7; ... 33 7.8
UniRef50_Q5K8E1 Cluster: Protein-nucleus import-related protein,... 33 7.8
UniRef50_A5DYR4 Cluster: Putative uncharacterized protein; n=5; ... 33 7.8
UniRef50_A2QMH2 Cluster: Contig An07c0030, complete genome. prec... 33 7.8
UniRef50_P31483 Cluster: Nucleolysin TIA-1 isoform p40 (RNA-bind... 33 7.8
>UniRef50_UPI00015B5E0C Cluster: PREDICTED: similar to
ENSANGP00000003404; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000003404 - Nasonia
vitripennis
Length = 708
Score = 194 bits (472), Expect = 2e-48
Identities = 99/171 (57%), Positives = 121/171 (70%), Gaps = 8/171 (4%)
Frame = +2
Query: 56 DIXSDFNR-QDEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPP---EETNGNASY 223
D+ DF + Q EF G+ VDLYDDVI+A E G ++ EETNGNA Y
Sbjct: 12 DLEQDFAQVQGEFTGDGVDLYDDVIAAAPGNNERGTSESSERGDRDRETSNEETNGNAPY 71
Query: 224 H---GPVHGHH-GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKG 391
H + + GRR QLYVGNLTWW +DQDIA+A++++GV DF +VKFFENRANG+SKG
Sbjct: 72 HQLGNNIQPNQIGRRHQLYVGNLTWWTSDQDIADAVANIGVPDFIEVKFFENRANGRSKG 131
Query: 392 FCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTRST 544
FCVISLGS+QS+RM MERL K +HGQHP +T P+KQALN FESQ K+R T
Sbjct: 132 FCVISLGSEQSMRMCMERLPKKELHGQHPQVTYPSKQALNQFESQCKSRPT 182
>UniRef50_Q9VSH4 Cluster: CG7185-PA; n=4; Endopterygota|Rep:
CG7185-PA - Drosophila melanogaster (Fruit fly)
Length = 652
Score = 173 bits (420), Expect = 4e-42
Identities = 93/175 (53%), Positives = 112/175 (64%), Gaps = 14/175 (8%)
Frame = +2
Query: 56 DIXSDF--NRQDEFAGENVDLYDDV--ISAPASKPEDGDGPP----IIAPNQHPPEETNG 211
D+ DF QDEF G+ VDLYDD+ + A+ G G P P P E N
Sbjct: 12 DLDKDFAGQAQDEFGGDGVDLYDDIGGPTESAASGGGGGGTPSADGAAGPGSGEPGERNS 71
Query: 212 ---NASYH---GPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRA 373
N YH G + RR+QLYVGNLTWW TDQDIAN++ D+GVSD Q+VKFFENRA
Sbjct: 72 GGPNGVYHQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRA 131
Query: 374 NGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTR 538
NGQSKGF VISLGS+ S+R V+++L K +HGQ P +T P+KQAL FES KTR
Sbjct: 132 NGQSKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFESLQKTR 186
>UniRef50_Q16630 Cluster: Cleavage and polyadenylation specificity
factor subunit 6; n=26; Euteleostomi|Rep: Cleavage and
polyadenylation specificity factor subunit 6 - Homo
sapiens (Human)
Length = 551
Score = 144 bits (348), Expect = 2e-33
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Frame = +2
Query: 56 DIXSDFNRQDEFAG-ENVDLYDDVISAPASK---PEDGDGPPIIAPNQHPPEETNGNASY 223
D+ +FN++ E+ G + +DLYDDVIS A+ PED D + P + G +
Sbjct: 13 DVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVG---DDVGKGAA 69
Query: 224 HGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 403
V+ + G+R LY+GNLTWW TD+D+ A+ +GV+D ++KFFENRANGQSKGF ++
Sbjct: 70 PNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALV 129
Query: 404 SLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSK 532
+GS+ S + +M+ L + +HGQ+P +T KQ L+ FE QS+
Sbjct: 130 GVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 172
>UniRef50_A7SHB1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 502
Score = 116 bits (280), Expect = 4e-25
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LYVGNLTWW TDQ + A+ + GV+D ++KFF+NR NGQSKGF +I LGSD+S+ MV E
Sbjct: 104 LYVGNLTWWTTDQQLTEALQECGVTDLINIKFFDNRTNGQSKGFAMIELGSDKSIEMVTE 163
Query: 443 RLSXKXIHGQHPXLTLPTKQALNXFESQSKTRS 541
RL I GQ+P +T TKQ L+ FE+Q + ++
Sbjct: 164 RLPKFDIEGQNPVVTPATKQHLHEFEAQHRAKA 196
>UniRef50_Q8N684 Cluster: Cleavage and polyadenylation specificity
factor subunit 7; n=23; Tetrapoda|Rep: Cleavage and
polyadenylation specificity factor subunit 7 - Homo
sapiens (Human)
Length = 471
Score = 113 bits (272), Expect = 3e-24
Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +2
Query: 56 DIXSD--FNRQDEFAG-ENVDLYDDVISAPASKPEDGDG---PPIIAPNQHPPEETNGNA 217
DI +D FN+ EF + +DLYDDV++A + +D PP + P+ N
Sbjct: 9 DIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTP 68
Query: 218 SYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFC 397
+ G RR +YVG+ +WW TDQ + I +GV D ++KF ENRANGQSKG+
Sbjct: 69 AILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYA 128
Query: 398 VISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTR 538
+ + S+ SV ++E L K ++G+ + T+Q L+ FE+Q++ R
Sbjct: 129 EVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
>UniRef50_Q18937 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 489
Score = 97.5 bits (232), Expect = 2e-19
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Frame = +2
Query: 107 DLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTW 286
DLYD+ I AP + E P+ T G + P GR++ YVGNL W
Sbjct: 39 DLYDEAI-APTNSTESAK--PVSPTITTVTAPTAGIGAK--PATSSEGRKYCCYVGNLLW 93
Query: 287 WATDQDIANAISDVGV--SDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKX 460
+ TD D+ A+ G+ S F D+KFFENR NGQSKG+ ++ L SD +V+ ME L K
Sbjct: 94 YTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTMEILPTKT 153
Query: 461 IHGQHPXLTL--PTKQA-LNXFESQSKTR 538
IHGQ P + T QA L +++++TR
Sbjct: 154 IHGQSPTVLSYNKTNQAKLEDAQAKNQTR 182
>UniRef50_UPI000065CB8D Cluster: Homolog of Brachydanio rerio "Cpsf6
protein.; n=1; Takifugu rubripes|Rep: Homolog of
Brachydanio rerio "Cpsf6 protein. - Takifugu rubripes
Length = 237
Score = 69.3 bits (162), Expect = 7e-11
Identities = 30/84 (35%), Positives = 51/84 (60%)
Frame = +2
Query: 287 WATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIH 466
W +D D+ +GV D D+KF ENR NGQS+GF +S+ S++S+++++E++ +H
Sbjct: 30 WTSDSDLVCLAQRLGVKDVTDIKFAENRVNGQSRGFAEMSVTSEESLKILLEKVPDCILH 89
Query: 467 GQHPXLTLPTKQALNXFESQSKTR 538
G+ T Q L+ FE ++ R
Sbjct: 90 GETIDCRFATLQNLSIFEEKASQR 113
>UniRef50_Q4P6J4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 374
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVS-DFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+Y+G+L WW+TD++I S VGV+ D+ F E++ NG+SKG + S+ R +
Sbjct: 118 VYIGDLNWWSTDEEIRQIASSVGVTLSLNDITFSEHKVNGKSKGVAYVETESEADARKIK 177
Query: 440 ERLSXKXIHGQHPXLTLPTKQALNXFESQSK 532
H + +TL T N F + K
Sbjct: 178 TWFEENDFHFKRANVTLTTSANGNPFRTLPK 208
>UniRef50_A6RC85 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 417
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = +2
Query: 137 ASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANA 316
A+ P+ + P A Q PP++ H L+V +L WW TD DI
Sbjct: 80 AATPQPSNPPQPQAQPQAPPQQGVKRKESHDNQAADPSATTALFVSDLYWWTTDDDIRGW 139
Query: 317 ISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERL 448
++ GV D +DV F E++ NG+SKG + S Q+ ++
Sbjct: 140 VNQAGVEDELKDVTFSEHKVNGKSKGQAFVEFRSSQAATATKHKI 184
>UniRef50_Q00Y64 Cluster: Hydroxymethylpyrimidine kinase; n=3;
Ostreococcus|Rep: Hydroxymethylpyrimidine kinase -
Ostreococcus tauri
Length = 669
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
GR +YV +LTWW TD ++ +++ G + + FF ++A G+SKG C + + +
Sbjct: 154 GRPTAVYVASLTWWTTDAELEGILAEFG--RVKSLTFFADKATGKSKGCCAVEFTTSDAA 211
Query: 428 RMVMERLSXKXIHGQ 472
E+L + I+G+
Sbjct: 212 AACKEKLHGRQINGK 226
>UniRef50_A7P459 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 647
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L+VG L WW TD ++ + +S G +++KFF+ RA+G+SKG+C + + E
Sbjct: 231 LFVGELHWWTTDAELESVLSQYG--RVKEIKFFDERASGKSKGYCQVEFYDASAAAACKE 288
Query: 443 RLSXKXIHGQHPXLTLPTKQAL 508
++ +G+ + + Q L
Sbjct: 289 GMNGYIFNGRACVVAFASPQTL 310
>UniRef50_Q54RW5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 952
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+ L WW TDQ + N + G +K FEN NG+SKG+ + + ++
Sbjct: 165 LYISGLEWWTTDQQLENVFLEFG--KIVTLKIFENENNGKSKGYAFVEFEHIEQAQLAKS 222
Query: 443 RLSXKXIHGQHPXLTLPTKQ 502
+ K I+G+ + L ++Q
Sbjct: 223 KTEKKEINGKEMTIRLLSQQ 242
>UniRef50_Q9SAF2 Cluster: F3F19.21 protein; n=1; Arabidopsis
thaliana|Rep: F3F19.21 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 573
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L+VG L WW TD +I + +S G +++KFF+ R +G+SKG+C + + E
Sbjct: 204 LFVGELHWWTTDAEIESVLSQYG--RVKEIKFFDERVSGKSKGYCQVEFYDSAAAAACKE 261
Query: 443 RLSXKXIHGQ 472
++ +G+
Sbjct: 262 GMNGFIFNGK 271
>UniRef50_Q651Z0 Cluster: RNA-binding protein-like; n=4; Oryza
sativa|Rep: RNA-binding protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 604
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L+VG L WW TD D+ +S G ++V+FF+ +A+G+SKG+C + + E
Sbjct: 187 LFVGELHWWTTDADLEAELSKYG--QVKEVRFFDEKASGKSKGYCQVDFYDPGAAASCKE 244
Query: 443 RLSXKXIHGQ 472
++ +G+
Sbjct: 245 GMNGHLFNGR 254
>UniRef50_Q012A5 Cluster: Ps16 protein; n=2; Ostreococcus|Rep: Ps16
protein - Ostreococcus tauri
Length = 1094
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/82 (28%), Positives = 45/82 (54%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL+W TD+ +A S+ D +D ++R G+S+GF +S+ +++ V
Sbjct: 915 RVYVGNLSWGVTDESLAELFSEF---DVRDASVMKDRETGRSRGFAFVSMNNEEDVERAS 971
Query: 440 ERLSXKXIHGQHPXLTLPTKQA 505
L+ + + G+ ++ QA
Sbjct: 972 AALNGREVDGRELRVSKAQAQA 993
Score = 39.1 bits (87), Expect = 0.090
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
GRR +Y GNL+W D+ + S+ G +D + +R G+S+GF +++ +
Sbjct: 1014 GRR--VYFGNLSWGMDQYDLQDLCSEFG--SVEDSRLITDRDTGRSRGFGFVTMSNTTEA 1069
Query: 428 RMVMERLSXKXIHGQ 472
V+ +L+ + + G+
Sbjct: 1070 DEVVAQLNGQDVDGR 1084
>UniRef50_A4RBZ1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 424
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQS 424
G + + L WW TD DI I + G + +D+ F E++ NG+SKG I L S Q+
Sbjct: 94 GATSAILISELQWWITDDDIRGWIREAGCEEELKDITFSEHKVNGKSKGQVYIELTSQQA 153
Query: 425 VRMVMERLSXKXIHG 469
V RL G
Sbjct: 154 ATAVKHRLESSGEDG 168
>UniRef50_Q8LPB0 Cluster: Glycine-rich RNA-binding protein; n=1;
Physcomitrella patens|Rep: Glycine-rich RNA-binding
protein - Physcomitrella patens (Moss)
Length = 155
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/82 (30%), Positives = 43/82 (52%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L+VG L W TD +I A S G + +VK +R G+S+GF ++ +DQ +
Sbjct: 43 KLFVGGLAWGTTDDNIKEAFSAFG--EVTEVKIICDRDTGRSRGFGFVTFATDQDAEAAL 100
Query: 440 ERLSXKXIHGQHPXLTLPTKQA 505
+ L + + G+ + TKQ+
Sbjct: 101 QALDGRDLAGRTIRVNYATKQS 122
>UniRef50_Q9FM71 Cluster: Genomic DNA, chromosome 5, P1 clone:MDF20;
n=2; Arabidopsis thaliana|Rep: Genomic DNA, chromosome
5, P1 clone:MDF20 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 710
Score = 49.2 bits (112), Expect = 8e-05
Identities = 22/59 (37%), Positives = 35/59 (59%)
Frame = +2
Query: 227 GPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 403
G G G L+VG+L WW TD ++ + G ++VKFF+ +A+G+SKG+C +
Sbjct: 224 GGTGGGGGGGAFLFVGDLHWWTTDAELEAELCKYGA--VKEVKFFDEKASGKSKGYCQV 280
>UniRef50_A1CJF8 Cluster: RRM domain protein; n=5;
Pezizomycotina|Rep: RRM domain protein - Aspergillus
clavatus
Length = 400
Score = 49.2 bits (112), Expect = 8e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
L + +L WW TD DI I++ G D +DV F E++ NG+SKG I + Q+
Sbjct: 114 LLISDLYWWTTDDDIRGWINEAGCEDELKDVTFSEHKVNGKSKGQAFIEFTTLQAATASK 173
Query: 440 ERLSXKXIHGQ 472
++ + GQ
Sbjct: 174 HKIENLNLAGQ 184
>UniRef50_Q55XW5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 275 NLTWWATDQDIANAISDVGVS-DFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLS 451
+L WW +D+D+ + +GV + +D+ F E++ NG+SKG V++ S ++ V E L
Sbjct: 81 DLHWWTSDRDLVELCAQLGVVIEEKDILFMEHKVNGKSKGQAVLNCHSKENSLKVNEWLQ 140
Query: 452 XKXIHGQHPXLTLPTKQALNXFESQSK 532
G+ TL N F ++
Sbjct: 141 CNAFQGKKVISTLAASIMGNPFHPNNQ 167
>UniRef50_Q03251 Cluster: Glycine-rich RNA-binding protein 8; n=74;
cellular organisms|Rep: Glycine-rich RNA-binding protein
8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 169
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/72 (27%), Positives = 40/72 (55%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
++ +VG L W D+D+ S G D D K +R +G+S+GF ++ ++++R
Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFG--DVIDSKIINDRESGRSRGFGFVTFKDEKAMRDA 63
Query: 437 MERLSXKXIHGQ 472
+E ++ K + G+
Sbjct: 64 IEEMNGKELDGR 75
>UniRef50_UPI000023EAFE Cluster: hypothetical protein FG08870.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG08870.1 - Gibberella zeae PH-1
Length = 929
Score = 46.0 bits (104), Expect = 8e-04
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
L + L WW TD DI + G D +D+ F E++ NG+SKG I S Q+
Sbjct: 93 LMISELNWWNTDDDIRGWAREAGCEDEIKDITFSEHKVNGKSKGQAYIEFYSPQASTATK 152
Query: 440 ERL 448
R+
Sbjct: 153 HRI 155
>UniRef50_Q4WWS4 Cluster: RRM domain protein; n=4;
Pezizomycotina|Rep: RRM domain protein - Aspergillus
fumigatus (Sartorya fumigata)
Length = 396
Score = 46.0 bits (104), Expect = 8e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
L + +L WW TD DI I+ G D +DV F E++ NG+SKG + + Q+
Sbjct: 114 LLISDLYWWTTDDDIRGWINAAGCEDELKDVTFSEHKVNGKSKGQAFVEFTTLQAATAAK 173
Query: 440 ERLSXKXIHGQ 472
++ + Q
Sbjct: 174 HQIENLNVSSQ 184
>UniRef50_Q5CIP3 Cluster: Single-stranded G-strand telomeric
DNA-binding protein; n=3; Cryptosporidium|Rep:
Single-stranded G-strand telomeric DNA-binding protein -
Cryptosporidium hominis
Length = 198
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/71 (29%), Positives = 41/71 (57%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
Q++V NL W T +D+A A +++G + +V +FE +G+S+G I ++ +
Sbjct: 123 QVFVTNLAWKTTQEDLAKAFNEIGPLESCEVFYFE---DGRSRGIATIVFTDPNHAQLAV 179
Query: 440 ERLSXKXIHGQ 472
E+L+ + I G+
Sbjct: 180 EKLNDREIDGR 190
>UniRef50_Q3B6Q3 Cluster: RNA-binding region RNP-1; n=6;
Chlorobium/Pelodictyon group|Rep: RNA-binding region
RNP-1 - Pelodictyon luteolum (strain DSM 273)
(Chlorobium luteolum (strain DSM273))
Length = 99
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/79 (25%), Positives = 44/79 (55%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + + +Y+GNL + ++ D+ +A S G D ++ ++ +G+SKGF + + S
Sbjct: 3 HVYQDLKMNIYIGNLPYSVSEDDLRDAFSQFGQVDSANI--IMDKFSGRSKGFGFVDMSS 60
Query: 416 DQSVRMVMERLSXKXIHGQ 472
D++ R +E ++ + G+
Sbjct: 61 DEAGRAAIEAMNEQEFKGR 79
>UniRef50_A3QQP3 Cluster: Chloroplast single strand DNA binding
protein; n=1; Mesostigma viride|Rep: Chloroplast single
strand DNA binding protein - Mesostigma viride
Length = 299
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/119 (24%), Positives = 50/119 (42%)
Frame = +2
Query: 155 GDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGV 334
G+ P + +Y G G +LYVGNL W D + + + G
Sbjct: 170 GERAPRAERGERSERSERSERTYTPRGDGEAGDANRLYVGNLPWSMDDGMLEDLFMEFGT 229
Query: 335 SDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALN 511
++ V +R +G+S+GF ++L + + M L + I G+ + L TK + N
Sbjct: 230 VNYARVVM--DRDSGRSRGFAFVALSTPEEANEAMANLDGEEIGGRTIRVNLATKSSGN 286
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LYVGNL W D+ + A S G + + + +R +G+S+GF +++ S +
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFG--EVKAAEVVLDRESGRSRGFAFVTMASPDAAEKAR 148
Query: 440 ERLSXKXIHGQHPXLTLP 493
L + G+ + P
Sbjct: 149 RGLDGTELAGRAIRVNFP 166
>UniRef50_P19684 Cluster: 33 kDa ribonucleoprotein, chloroplast
precursor; n=8; core eudicotyledons|Rep: 33 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
sylvestris (Wood tobacco)
Length = 324
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/97 (26%), Positives = 51/97 (52%)
Frame = +2
Query: 215 ASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGF 394
++Y G V H +LYV NL+W T Q + +A +D F K +R++G+S+GF
Sbjct: 207 STYQGFVDSPH----KLYVANLSWALTSQGLRDAFAD--QPGFMSAKVIYDRSSGRSRGF 260
Query: 395 CVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQA 505
I+ S +++ ++ ++ + G+ L + ++A
Sbjct: 261 GFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKA 297
Score = 35.9 bits (79), Expect = 0.84
Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LYVGNL + T ++ ++ G +V+ +R +S+GF +++GS + + +
Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGT--VANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 172
Query: 440 ERLSXKXIHGQHPXLTLPTKQALNXFESQS-KTRST 544
+ G+ + P E S K RST
Sbjct: 173 RLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRST 208
>UniRef50_Q43349 Cluster: 29 kDa ribonucleoprotein, chloroplast
precursor; n=5; Arabidopsis thaliana|Rep: 29 kDa
ribonucleoprotein, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 342
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LYVGNL+W D + N ++ G + + +R +G+SKGF ++L S Q V+ +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQG--KVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI 315
Query: 440 ERLSXKXIHGQ 472
L+ + G+
Sbjct: 316 NSLNGADLDGR 326
>UniRef50_Q5EUH9 Cluster: Putative uncharacterized protein; n=1;
Gemmata sp. Wa1-1|Rep: Putative uncharacterized protein
- Gemmata sp. Wa1-1
Length = 122
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LYVGNL+W TD + + + G + +R G+SKGF + +G+DQ + +
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYG--SVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAI 98
Query: 440 ERLSXKXIHGQ 472
+ + I G+
Sbjct: 99 TGMHGQVIEGR 109
>UniRef50_Q8VXC4 Cluster: Glycine rich RNA binding protein; n=20;
Magnoliophyta|Rep: Glycine rich RNA binding protein -
Oryza sativa (Rice)
Length = 194
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/73 (27%), Positives = 41/73 (56%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
++ +VG L W D+ + A S G + + K +R G+S+GF ++ S+Q++R
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYG--EILESKIINDRETGRSRGFGFVTFSSEQAMRDA 65
Query: 437 MERLSXKXIHGQH 475
+E ++ K + G++
Sbjct: 66 IEGMNGKELDGRN 78
>UniRef50_Q10KP0 Cluster: RNA recognition motif family protein,
expressed; n=9; Magnoliophyta|Rep: RNA recognition motif
family protein, expressed - Oryza sativa subsp. japonica
(Rice)
Length = 265
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G ++YVGNL+W + +AN S G + + K +R +G+S+GF ++ GS + V
Sbjct: 177 GEANRVYVGNLSWGVDNAALANLFS--GEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEV 234
Query: 428 RMVMERLSXKXIHGQHPXLTL 490
+ L + G+ +T+
Sbjct: 235 ENAVSNLDGADMDGRQIRVTV 255
>UniRef50_Q9SVM8 Cluster: Glycine-rich RNA-binding protein 2,
mitochondrial precursor; n=14; Magnoliophyta|Rep:
Glycine-rich RNA-binding protein 2, mitochondrial
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 158
Score = 43.6 bits (98), Expect = 0.004
Identities = 21/91 (23%), Positives = 42/91 (46%)
Frame = +2
Query: 203 TNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ 382
+NGN + +L++G L+W D + +A + G D D K +R G+
Sbjct: 17 SNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFG--DVVDAKVIVDRETGR 74
Query: 383 SKGFCVISLGSDQSVRMVMERLSXKXIHGQH 475
S+GF ++ + + + + K ++G+H
Sbjct: 75 SRGFGFVNFNDEGAATAAISEMDGKELNGRH 105
>UniRef50_Q9SIX3 Cluster: Putative glycine-rich RNA-binding protein;
n=1; Arabidopsis thaliana|Rep: Putative glycine-rich
RNA-binding protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 185
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
++ +VG L W +Q I ++ G + D K +R G+SKGF ++ + S+R
Sbjct: 44 YRCFVGGLAWATDEQSIERCFNEFG--EVFDSKIIIDRETGRSKGFRFVTFKDEDSMRTA 101
Query: 437 MERLSXKXIHGQH 475
++R++ + + G++
Sbjct: 102 IDRMNGQELDGRN 114
>UniRef50_Q40437 Cluster: RGP-3; n=2; Nicotiana|Rep: RGP-3 -
Nicotiana sylvestris (Wood tobacco)
Length = 144
Score = 43.2 bits (97), Expect = 0.006
Identities = 19/82 (23%), Positives = 44/82 (53%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L+VG L+W DQ + +A + G D D + +R +G+S+GF ++ D+ +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFG--DVVDARVIVDRDSGRSRGFGFVNFSDDECANEAI 96
Query: 440 ERLSXKXIHGQHPXLTLPTKQA 505
+ + + + G++ + + ++A
Sbjct: 97 KAMDGQELQGRNIRVRIAQERA 118
>UniRef50_A7SW98 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 534
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L++G+L +A + +A+A + +G S VK +NR G G+C + G + + VM
Sbjct: 4 LWMGDLDQFADEAFVASAFAAMGES-VASVKMIKNRITGGPAGYCFVDFGDTGTAQKVMS 62
Query: 443 RLSXKXIHGQHP 478
+L+ I G +P
Sbjct: 63 KLNGLPIPGSNP 74
>UniRef50_UPI00015B621E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 935
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/71 (32%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVG-VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++V NL + AT++++ A+ + + F+ VK F+ G+SKGFC +SL S+++V +
Sbjct: 691 VFVSNLDYTATEEEVREALKPIWPIISFRMVKDFK----GRSKGFCYVSLSSEEAVNEAL 746
Query: 440 ERLSXKXIHGQ 472
+L I+G+
Sbjct: 747 -KLDRTRINGR 756
>UniRef50_Q531A8 Cluster: FCA gamma; n=1; Pisum sativum|Rep: FCA
gamma - Pisum sativum (Garden pea)
Length = 743
Score = 41.9 bits (94), Expect = 0.013
Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 7/155 (4%)
Frame = +2
Query: 50 PTDIXSDFNRQDEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNA---S 220
P + +F+ ++ V + + +P G+GP N H P +G
Sbjct: 15 PAPLHRNFDSPQRWSPGRVGAFRPPGAGEGFRPMGGEGPGDFGFNNHQPPVMSGQKRGFP 74
Query: 221 YHG----PVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSK 388
+ G P H G +L+VG++ AT++DI + G + +V ++R GQ +
Sbjct: 75 FSGRGASPDHFDGGNFAKLFVGSVPRTATEEDIRPLFEEHG--NVIEVALIKDRKTGQHQ 132
Query: 389 GFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLP 493
G C I + + + + +H QH TLP
Sbjct: 133 GCCFIKYATSEEADQAI-----RALHNQH---TLP 159
>UniRef50_Q01IS3 Cluster: OSIGBa0128P10.1 protein; n=4; Oryza
sativa|Rep: OSIGBa0128P10.1 protein - Oryza sativa
(Rice)
Length = 488
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+++G L +W TD ++ A++ G + FF ++ G+S+GFC S +
Sbjct: 130 VFIGELPYWTTDAEVEGALAPHGA--LHGLHFFTDKLTGKSRGFCRADFLSPDAAASAAA 187
Query: 443 RLSXKXIHGQH 475
L + G+H
Sbjct: 188 ALHGRTFDGRH 198
>UniRef50_Q6C9S9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 439
Score = 41.9 bits (94), Expect = 0.013
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
LY+ NL WW ++ + D G D + V F E++ NG+SKG + S + R V
Sbjct: 142 LYILNLDWWTNEEIVRGWAVDCGFEDSVETVVFDEHKPNGKSKGVVYMQFASLAAARAVK 201
Query: 440 ERLSXKXIHGQHP 478
+ + Q P
Sbjct: 202 QHVEQLSPRTQSP 214
>UniRef50_Q0V5E5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 412
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSD-FQDVKFFENRANGQSKGFCVISLGSDQS 424
G L + ++ WW +++DI + G D +V F E++ NG+SKG + L S Q+
Sbjct: 117 GATAALMINDVNWWVSEEDIRGWANQSGCEDELNEVTFNEHKVNGKSKGQVYVQLQSPQA 176
Query: 425 VRMVMERL 448
+ ++
Sbjct: 177 ATALKHQI 184
>UniRef50_A1C467 Cluster: RNA binding domain protein; n=1;
Aspergillus clavatus|Rep: RNA binding domain protein -
Aspergillus clavatus
Length = 306
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/70 (34%), Positives = 39/70 (55%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+GNL++ TD+D+ + D VS+ DV+ +R GQ +GF +S + +E
Sbjct: 215 LYIGNLSFEMTDRDLNDLFKD--VSNVIDVRVSIDRRTGQPRGFAHAEFIDAESAQKGLE 272
Query: 443 RLSXKXIHGQ 472
LS K +G+
Sbjct: 273 ILSRKSPYGR 282
>UniRef50_A2XBX0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 252
Score = 41.5 bits (93), Expect = 0.017
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 266 YVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
YVGNL W T+ D+ + + +S ++F N+ G S+GFC + D+S+
Sbjct: 176 YVGNLKWDVTETDLRDFFKSLKISS---IRFAINKRTGDSRGFCHVDFEDDESL 226
>UniRef50_A2AX49 Cluster: RNA recognition motif 1; n=1; Guillardia
theta|Rep: RNA recognition motif 1 - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 41.5 bits (93), Expect = 0.017
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +2
Query: 209 GNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSK 388
G + GP G +L+VG L+W DQ + A + G + K +R +G+S+
Sbjct: 73 GRGAPRGPPDGPIDP-LKLFVGGLSWEVDDQQLMEAFQEFGNC---EAKVMVDRYSGRSR 128
Query: 389 GFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQS 529
GF ++ + S +E ++ + + G+ +T +Q + SQS
Sbjct: 129 GFGFVTFSEEHSAAKAIEEMNGRELLGRQITVT-HARQKIYEQNSQS 174
>UniRef50_Q4PBV1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 192
Score = 41.5 bits (93), Expect = 0.017
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL+W TD +A+A S G D ++R G+S+GF ++ + +
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSTYG--QLTDYIVMKDRETGRSRGFGFVTFATQAEADAAI 61
Query: 440 ERLSXKXIHGQ 472
L+ + + G+
Sbjct: 62 AALNEQELDGR 72
>UniRef50_P49314 Cluster: 31 kDa ribonucleoprotein, chloroplast
precursor; n=10; core eudicotyledons|Rep: 31 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
plumbaginifolia (Leadwort-leaved tobacco)
Length = 292
Score = 41.1 bits (92), Expect = 0.022
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 206 NGNASYHGPVHGHH-GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ 382
+GN+S+ G G ++YVGNL+W D + S+ G + D K +R +G+
Sbjct: 190 DGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQG--NVVDAKVVYDRDSGR 247
Query: 383 SKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
S+GF ++ S + V ++ L+ + G+
Sbjct: 248 SRGFGFVTYSSAKEVNDAIDSLNGIDLDGR 277
>UniRef50_Q67JJ7 Cluster: Glycine-rich RNA-binding protein; n=4;
Bacteria|Rep: Glycine-rich RNA-binding protein -
Symbiobacterium thermophilum
Length = 95
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY GNL W AT +D+ NA+S + + +R G+S+GF + + D++ ++V++
Sbjct: 5 LYFGNLPWAATSEDLHNAVSQ--YCEVISARIVTDRETGRSRGFGFVEV-PDEAAQLVID 61
Query: 443 RLS 451
L+
Sbjct: 62 ALN 64
>UniRef50_A7F6E1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 407
Score = 40.7 bits (91), Expect = 0.030
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 143 KPEDGDGPPII-APNQHPPEE--TNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIAN 313
K D G ++ P Q P ++ S P+ G L + L WW TD D+
Sbjct: 76 KSTDESGQDLLNIPKQAPQQQGVKRKEGSDDRPID--QGATTALLISELHWWNTDDDVRG 133
Query: 314 AISDVGVSD-FQDVKFFENRANGQSKG 391
I+ V D +++ F E++ NG+SKG
Sbjct: 134 WINQAQVEDELKEMTFSEHKVNGKSKG 160
>UniRef50_O04240 Cluster: RNA- or ssDNA-binding protein; n=2;
Papilionoideae|Rep: RNA- or ssDNA-binding protein -
Vicia faba var. minor
Length = 289
Score = 40.3 bits (90), Expect = 0.039
Identities = 24/107 (22%), Positives = 46/107 (42%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
D + ++ + EE G + R +LY GNL + +A I + G
Sbjct: 82 DDEEKVVVEEEEKENEEGQGEKENGEEIVAEEDTRTKLYFGNLPYSVDSAKLAGLIEEYG 141
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
++ +V + +R G+S+GF ++ + + V+E L K G+
Sbjct: 142 SAELVEVLY--DRDTGKSRGFAFATMTCVEDCKAVIENLDGKEFMGR 186
>UniRef50_A2R8K5 Cluster: Contig An16c0230, complete genome; n=2;
Aspergillus|Rep: Contig An16c0230, complete genome -
Aspergillus niger
Length = 381
Score = 40.3 bits (90), Expect = 0.039
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+GNL + TD+D+ DV + D++ +R GQ++GF S S + M
Sbjct: 288 LYIGNLPFEMTDRDLNELFKDV--QNVVDIRVAVDRRTGQARGFAHAEFVSTSSAKAAMA 345
Query: 443 RLSXKXIHGQ 472
L K +G+
Sbjct: 346 ILENKLPYGR 355
>UniRef50_Q9WX39 Cluster: Putative RNA-binding protein rbpF; n=10;
Bacteria|Rep: Putative RNA-binding protein rbpF -
Anabaena sp. (strain PCC 7120)
Length = 105
Score = 40.3 bits (90), Expect = 0.039
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGNL++ T +DI+N ++ G + V +R G+ +GF + +GSD +E
Sbjct: 3 IYVGNLSYEVTQEDISNVFAEYG--SVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIE 60
Query: 443 RL 448
L
Sbjct: 61 GL 62
>UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1;
Treponema pallidum|Rep: RNA-binding protein, putative -
Treponema pallidum
Length = 105
Score = 39.9 bits (89), Expect = 0.052
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL + T+ +A+ S G + V +++ +SKGF + + S +S +V+
Sbjct: 20 KIYVGNLNYATTEAGLASLFSQFG--EVLSVAVIKDKLTQRSKGFGFVEMESAESAELVI 77
Query: 440 ERLSXKXIHGQ 472
L+ K G+
Sbjct: 78 NELNEKEFEGR 88
>UniRef50_Q7XZ56 Cluster: Gbp1; n=1; Griffithsia japonica|Rep: Gbp1
- Griffithsia japonica (Red alga)
Length = 156
Score = 39.9 bits (89), Expect = 0.052
Identities = 26/97 (26%), Positives = 48/97 (49%)
Frame = +2
Query: 182 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 361
+Q PP ++NG A G GH G + ++YVGNL+W Q + + + + G D + F
Sbjct: 4 DQPPPPQSNGAAPQTG---GHSGGK-RVYVGNLSWDTRWQGLKDHMREAG--DVVHAEVF 57
Query: 362 ENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
A+G+S G ++ + + + L+ + G+
Sbjct: 58 -TEASGRSAGCGIVEFENSEGAETAISTLNDTMLDGR 93
>UniRef50_A7PZY6 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 632
Score = 39.9 bits (89), Expect = 0.052
Identities = 21/110 (19%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Frame = +2
Query: 185 QHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFE 364
++P E G PV G+ +++GN+ ++D+ + ++G+ V
Sbjct: 391 KYPKIEICGKQCGTAPVEGND----TIFLGNIDKNWKNEDVVKLLQEIGIDKIDKVTVMV 446
Query: 365 NRAN-GQSKGFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALN 511
+ +N +++GF + L +++ ++ ++L K + G+H + + + LN
Sbjct: 447 DPSNIERNRGFAFLELETNKDAQLAYKKLQKKDVFGKHQNIKVAWAEPLN 496
>UniRef50_A0EH21 Cluster: Chromosome undetermined scaffold_96, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_96,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 39.9 bits (89), Expect = 0.052
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + + +++ NL + + DIA S G + DV ++ G+SKGFC ++
Sbjct: 22 HDEYNKSSYIFIANLNYAMNEGDIAIVFSQYG--EIVDVHLVRDKITGKSKGFCFLAYED 79
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 80 QRSTILAVDNFNHAEICGR 98
>UniRef50_Q7NHK5 Cluster: RNA-binding protein; n=10; cellular
organisms|Rep: RNA-binding protein - Gloeobacter
violaceus
Length = 123
Score = 39.5 bits (88), Expect = 0.068
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
++VGNL + T+QDI A S+ G + VK +R G+ +GF + + ++ +++
Sbjct: 3 VFVGNLPFSVTEQDITEAFSEYGT--VKSVKIPTDRETGRPRGFAFVEMADEEEAKVI 58
>UniRef50_Q3J7I0 Cluster: RNA-binding protein, RNP-1; n=1;
Nitrosococcus oceani ATCC 19707|Rep: RNA-binding
protein, RNP-1 - Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848)
Length = 119
Score = 39.5 bits (88), Expect = 0.068
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGNL++ TD+D+ A + G + K ++ + +SKGF + + S + ++
Sbjct: 20 IYVGNLSYQVTDEDLRAAFENYG--EVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIK 77
Query: 443 RLSXKXIHGQ 472
+ I G+
Sbjct: 78 EMHDSDIKGR 87
>UniRef50_P82277 Cluster: Plastid-specific 30S ribosomal protein 2,
chloroplast precursor; n=7; Magnoliophyta|Rep:
Plastid-specific 30S ribosomal protein 2, chloroplast
precursor - Spinacia oleracea (Spinach)
Length = 260
Score = 39.5 bits (88), Expect = 0.068
Identities = 24/112 (21%), Positives = 55/112 (49%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDF 343
PP++ EET+ +++ G RR LYVGN+ + ++ + + G +
Sbjct: 55 PPLLKVRAVVTEETSSSSTASSSSDGEGARR--LYVGNIPRNLNNDELRTIVEEHGAIEI 112
Query: 344 QDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTK 499
+V + ++ +G+S+ F +++ + + V+E+L+ I G+ + + K
Sbjct: 113 AEVMY--DKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEK 162
>UniRef50_A2E2A9 Cluster: Eukaryotic translation initiation factor 3
subunit 10, putative; n=1; Trichomonas vaginalis G3|Rep:
Eukaryotic translation initiation factor 3 subunit 10,
putative - Trichomonas vaginalis G3
Length = 311
Score = 39.1 bits (87), Expect = 0.090
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +2
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLS 451
L WW TDQ I ++S +G +D+ F + NGQS G + + S+ V + + LS
Sbjct: 51 LDWWITDQQITESLSAIG--HVKDLYFKQFHTNGQSSGDVDVEIQSELPVEEINDILS 106
>UniRef50_Q6BQ88 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 183
Score = 39.1 bits (87), Expect = 0.090
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 430
+ F+L+VGNL ATD+ +ANA VK + G++KG+ ++ S
Sbjct: 84 KHFRLFVGNLGTDATDELLANAFGK--YKTLSKVKVPMDNKTGKNKGYGFVAFESPDDYF 141
Query: 431 MVMERLSXKXIHGQHP-------XLTLPTKQALNXFESQSKTR 538
+ ++ K I GQHP PTK+ + F++ K R
Sbjct: 142 QAFKDMNGKYI-GQHPVQLKRAETNIKPTKKKSDSFKNNRKGR 183
>UniRef50_Q4WC94 Cluster: Nucleic acid-binding protein; n=2;
Trichocomaceae|Rep: Nucleic acid-binding protein -
Aspergillus fumigatus (Sartorya fumigata)
Length = 324
Score = 39.1 bits (87), Expect = 0.090
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+GNL++ TD+D+ D+ ++ DV+ +R GQ +GF +S + E
Sbjct: 234 LYLGNLSFEMTDRDLNELFRDI--NNVIDVRVSVDRRTGQPRGFAHAEFLDVESAQKAFE 291
Query: 443 RLSXKXIHGQ 472
LS K +G+
Sbjct: 292 ILSGKAPYGR 301
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +YVGNL + T +D+ N + GV + D+ +NR G S+GF + S ++ +
Sbjct: 143 RQTVYVGNLFYDVTAEDLKNHMQQFGVVERVDL-ITDNR--GLSRGFAYVHFDSIEAAKS 199
Query: 434 VMERLSXKXIHGQ 472
+E + + G+
Sbjct: 200 CVEAMHLQIFEGR 212
>UniRef50_P40565 Cluster: U2 snRNP component IST3; n=5;
Saccharomycetales|Rep: U2 snRNP component IST3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 148
Score = 39.1 bits (87), Expect = 0.090
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E +G S H H + +Y+GNL T+ DI S+ GV DV +
Sbjct: 11 ELQSGILSPHQSWHNEYKDNAYIYIGNLNRELTEGDILTVFSEYGVP--VDVILSRDENT 68
Query: 377 GQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
G+S+GF + +S + ++ L+ I G+
Sbjct: 69 GESQGFAYLKYEDQRSTILAVDNLNGFKIGGR 100
>UniRef50_Q03250 Cluster: Glycine-rich RNA-binding protein 7; n=16;
cellular organisms|Rep: Glycine-rich RNA-binding protein
7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 176
Score = 39.1 bits (87), Expect = 0.090
Identities = 17/72 (23%), Positives = 39/72 (54%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
++ +VG L W D+ + A + G D D K +R G+S+GF ++ +++++
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYG--DVIDSKIINDRETGRSRGFGFVTFKDEKAMKDA 65
Query: 437 MERLSXKXIHGQ 472
+E ++ + + G+
Sbjct: 66 IEGMNGQDLDGR 77
>UniRef50_Q6C1T7 Cluster: Similar to DEHA0A13563g Debaryomyces
hansenii IPF 7368.1; n=1; Yarrowia lipolytica|Rep:
Similar to DEHA0A13563g Debaryomyces hansenii IPF 7368.1
- Yarrowia lipolytica (Candida lipolytica)
Length = 422
Score = 36.7 bits (81), Expect(2) = 0.096
Identities = 20/78 (25%), Positives = 33/78 (42%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VG L+W D + +D G + +A G+SKGF + S + +E
Sbjct: 170 VFVGGLSWNVDDDWLTKEFADAGA---VSARVITEKATGRSKGFGYVDFASGADAQKCVE 226
Query: 443 RLSXKXIHGQHPXLTLPT 496
K I G+ L + T
Sbjct: 227 EFQDKEIDGRTVRLDIST 244
Score = 21.4 bits (43), Expect(2) = 0.096
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 65 SDFNRQDEFAGENVDLYDDVISAPASKPEDGDGP 166
SD + DE E ++ + + PA++PE P
Sbjct: 132 SDSDSDDEKTEEKTEVKAETKAEPAAEPEAAAEP 165
>UniRef50_UPI00004996C0 Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 136
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LY+G+L + TD+ + A G D K +R + +SKGF ++ D+ + +
Sbjct: 3 RLYIGSLAYSVTDESLKAAFEKFGT--VTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAI 60
Query: 440 ERLSXKXIHGQ 472
E ++ + + G+
Sbjct: 61 EEMNEQELEGR 71
>UniRef50_P73557 Cluster: RNA-binding protein; n=2;
Chroococcales|Rep: RNA-binding protein - Synechocystis
sp. (strain PCC 6803)
Length = 83
Score = 38.7 bits (86), Expect = 0.12
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGNL++ AT+ D+ S+ G + V+ +R G+ +GF + + SD+ +E
Sbjct: 3 IYVGNLSYQATEDDVLTVFSEYGT--VKRVQLPTDRETGRMRGFGFVEMSSDKEEDAAIE 60
Query: 443 RL 448
L
Sbjct: 61 AL 62
>UniRef50_Q1DZF7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 334
Score = 38.7 bits (86), Expect = 0.12
Identities = 21/70 (30%), Positives = 35/70 (50%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+GN+ + TD+D+ DV + DV+ +R G+++GF +S R
Sbjct: 236 LYIGNIPFEMTDRDLNELFKDV--DNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFT 293
Query: 443 RLSXKXIHGQ 472
LS K +G+
Sbjct: 294 LLSTKTPYGR 303
>UniRef50_A7CQC8 Cluster: RNP-1 like RNA-binding protein; n=1;
Opitutaceae bacterium TAV2|Rep: RNP-1 like RNA-binding
protein - Opitutaceae bacterium TAV2
Length = 106
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/71 (26%), Positives = 38/71 (53%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LYVGNL++ ++ D+ A S G DV +R G+ +GF ++ + + ++
Sbjct: 4 KLYVGNLSFNTSEADLRTAFSTCGT--LTDVFLATDRETGRPRGFAFVTFDTAEESQLAT 61
Query: 440 ERLSXKXIHGQ 472
E+L+ + G+
Sbjct: 62 EKLNGTDLGGR 72
>UniRef50_A7NXI6 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 283
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LY GNL + +A I + G + +V + NR G+S+GF +++ S + V+
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLY--NRDTGRSRGFAFVTMSSVEDCNAVI 169
Query: 440 ERLSXKXIHGQ 472
E L G+
Sbjct: 170 ENLDGSEYGGR 180
>UniRef50_A4V6K2 Cluster: PRM10 protein; n=1; Dugesia japonica|Rep:
PRM10 protein - Dugesia japonica (Planarian)
Length = 325
Score = 38.3 bits (85), Expect = 0.16
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L+VG L+W T++D+ N G +K ++ G S+GF +++ ++ S++ V+
Sbjct: 73 KLFVGGLSWETTEEDLKNYFETWGKVAHCVIKL--DKMTGNSRGFGFVTMDTEDSLKKVL 130
Query: 440 E----RLSXKXIHGQHPXLTLPTKQ 502
E RL K I P PTK+
Sbjct: 131 EVPEHRLKNKKI---DPKPAKPTKE 152
>UniRef50_A4HMS6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 458
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+++GN+ + T++D+ N + G+ D + V+ +R G KGF + SV +E
Sbjct: 275 IFLGNVAYDTTEEDVWNFFQEHGIRDVKRVRLVRDRETGDCKGFGYVEFMHASSVHPAIE 334
Query: 443 RLSXK 457
K
Sbjct: 335 TRGDK 339
>UniRef50_Q7SET9 Cluster: Predicted protein; n=2; Sordariales|Rep:
Predicted protein - Neurospora crassa
Length = 300
Score = 38.3 bits (85), Expect = 0.16
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
GRR +Y+GNL + D+ + D G + ++ + + +G++ G+C I + +
Sbjct: 10 GRR--IYMGNLLYSVKPADVEGLLQDAGFTQYEKIHISVDPLSGRNPGYCFIEFTTREEA 67
Query: 428 RMVMERLSXKXIHGQ 472
+E L+ + G+
Sbjct: 68 ERALESLAGVDLCGR 82
>UniRef50_Q6C4U4 Cluster: Similarities with tr|O13845
Schizosaccharomyces pombe Putative splicing factor; n=1;
Yarrowia lipolytica|Rep: Similarities with tr|O13845
Schizosaccharomyces pombe Putative splicing factor -
Yarrowia lipolytica (Candida lipolytica)
Length = 621
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 430
R +LYVGN+ + T+ +I G +F D+ + G+SKG+C I + +
Sbjct: 444 RFHRLYVGNIYFGVTEGEIIQIFEAFGPIEFADL---QKEKTGKSKGYCFIQYVNPDDAK 500
Query: 431 MVMERLSXKXIHGQ 472
+E+++ + G+
Sbjct: 501 TALEKMNGFELAGR 514
>UniRef50_Q08473 Cluster: RNA-binding protein squid; n=22;
Endopterygota|Rep: RNA-binding protein squid -
Drosophila melanogaster (Fruit fly)
Length = 344
Score = 37.9 bits (84), Expect = 0.21
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 5.9
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>UniRef50_Q8GU29 Cluster: Glycin-rich RNA binding protein; n=6;
cellular organisms|Rep: Glycin-rich RNA binding protein
- Polytomella sp. Pringsheim 198.80
Length = 177
Score = 37.5 bits (83), Expect = 0.28
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSD 418
+LYVGNL+W A ++D+ G + ++ +R +G+S+GF ++L +D
Sbjct: 4 RLYVGNLSWNAKEEDLRTYFGKFG--EVEEASIALDRESGRSRGFGFVTLPAD 54
>UniRef50_A5K789 Cluster: RNA binding protein, putative; n=7;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium vivax
Length = 250
Score = 37.5 bits (83), Expect = 0.28
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +2
Query: 200 ETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANG 379
E N NAS H V + ++YVGNL W T + + G D V FE+ G
Sbjct: 2 EDNSNASVHSAVQQSPAKGCRVYVGNLPWKVTWPVLKTHMKKAG--DVVRVDIFED-TQG 58
Query: 380 QSKGFCVISLGSDQSVRMVMERLS 451
+SKG ++ + + + + L+
Sbjct: 59 RSKGCGIVEYATYEEAQEAINSLN 82
>UniRef50_A0E3P7 Cluster: Chromosome undetermined scaffold_77, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_77,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 318
Score = 37.5 bits (83), Expect = 0.28
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQ---SKGFCVIS 406
H H + L+V NL+ TD ++ G ++ V E R+ G S+GF +
Sbjct: 111 HYQHLEKLCLHVSNLSKRVTDAELKETFEKYGQIEYAAV-CMEPRSKGPGKVSRGFGFVK 169
Query: 407 LGSDQSVRMVMERLSXKXIHG 469
+SV++ +E + K +HG
Sbjct: 170 FAKKESVQIALEAMQDKELHG 190
>UniRef50_Q4WHA5 Cluster: Heterogeneous nuclear ribonucleoprotein
HRP1; n=1; Aspergillus fumigatus|Rep: Heterogeneous
nuclear ribonucleoprotein HRP1 - Aspergillus fumigatus
(Sartorya fumigata)
Length = 608
Score = 37.5 bits (83), Expect = 0.28
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++++G L W TDQ + + S G + Q+ + A G+S+GF ++ ++V VM
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFG--EVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM 163
>UniRef50_A7SV94 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 81
Score = 37.1 bits (82), Expect = 0.36
Identities = 17/72 (23%), Positives = 40/72 (55%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LY+GNL + + + +I A + GV + V ++ +G+S+GF + L + + +
Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFGV---EKVDILRDKESGRSRGFGFVLLQTADQIAPAI 66
Query: 440 ERLSXKXIHGQH 475
E+++ + G++
Sbjct: 67 EKMNQSSVGGRN 78
>UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 -
Neurospora crassa
Length = 575
Score = 37.1 bits (82), Expect = 0.36
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 239 GHHGRRF---QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISL 409
GHH +LYVGN+ + T+QD+ N G +F + + NG+S+G+ +
Sbjct: 272 GHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQL---QKDDNGRSRGYGFVQF 328
Query: 410 GSDQSVRMVMERLSXKXIHGQ 472
R +E+++ + G+
Sbjct: 329 RDAGQAREALEKMNGFDLAGR 349
>UniRef50_Q0TVC9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 341
Score = 37.1 bits (82), Expect = 0.36
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L++GN+++ +D+D+ + D+ + DV+ +R GQ +GF S E
Sbjct: 247 LFIGNMSFEMSDKDLNDLFRDI--RNVNDVRVAIDRRTGQPRGFAHADFLDVASATKAKE 304
Query: 443 RLSXKXIHGQ 472
LS K I+G+
Sbjct: 305 ILSAKTIYGR 314
>UniRef50_A6GJJ1 Cluster: Probable nucleic acid-binding protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Probable nucleic
acid-binding protein - Plesiocystis pacifica SIR-1
Length = 155
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/88 (22%), Positives = 39/88 (44%)
Frame = +2
Query: 239 GHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSD 418
G+ G +L+VG L+W + + VG D +R G S+GF +++ +
Sbjct: 70 GNSGPPCRLFVGGLSWDTESDSLRELFAKVGA--VVDAMIVTDRDTGDSRGFGFVTMANR 127
Query: 419 QSVRMVMERLSXKXIHGQHPXLTLPTKQ 502
+ M+ L + G+ + L T++
Sbjct: 128 KDATKAMKELGGTELDGRSIRIDLATER 155
>UniRef50_Q9P3U1 Cluster: RNA-binding protein involved in export of
mRNAs; n=1; Schizosaccharomyces pombe|Rep: RNA-binding
protein involved in export of mRNAs -
Schizosaccharomyces pombe (Fission yeast)
Length = 434
Score = 36.7 bits (81), Expect = 0.48
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +2
Query: 221 YHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCV 400
YH HG +YVGNL W +D+++ + +D+G + + G+SKGF V
Sbjct: 270 YHAYPHGPCSDC--IYVGNLPWATSDRNLLDLFTDIGSVIRARIAY---EPTGRSKGFGV 324
Query: 401 ISLGSDQSVRMVMERLS 451
+ ++ +E+L+
Sbjct: 325 VQFENENDAASSIEKLN 341
>UniRef50_Q14103 Cluster: Heterogeneous nuclear ribonucleoprotein
D0; n=123; Deuterostomia|Rep: Heterogeneous nuclear
ribonucleoprotein D0 - Homo sapiens (Human)
Length = 355
Score = 36.3 bits (80), Expect = 0.64
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>UniRef50_Q4SEZ3 Cluster: Chromosome 1 SCAF14609, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
SCAF14609, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 476
Score = 35.9 bits (79), Expect = 0.84
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L+VG L W T + + N S G + D +++ QS+GF + VR V+
Sbjct: 1 KLFVGGLDWSTTQETLRNYFSQYG--EVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVL 58
Query: 440 E 442
E
Sbjct: 59 E 59
>UniRef50_Q7MWI3 Cluster: RNA-binding protein; n=5;
Bacteroidetes/Chlorobi group|Rep: RNA-binding protein -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 97
Score = 35.9 bits (79), Expect = 0.84
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGNL + ++D+ + G + +R G+S+GF + + + R +E
Sbjct: 5 IYVGNLNYRVREEDLTGLLQQYGA--VTSARVITDRETGRSRGFGFVEMEDENDARRAIE 62
Query: 443 RLSXKXIHGQ 472
L + G+
Sbjct: 63 ELFDQEFQGR 72
>UniRef50_Q9ZUJ3 Cluster: T2K10.5 protein; n=3; Magnoliophyta|Rep:
T2K10.5 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 258
Score = 35.9 bits (79), Expect = 0.84
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L+VGNL+W T + +A A + G D + + G+S+G+ + S + +
Sbjct: 178 KLFVGNLSWTVTSESLAGAFRECG--DVVGARVVFDGDTGRSRGYGFVCYSSKAEMETAL 235
Query: 440 ERLSXKXIHGQ 472
E L + G+
Sbjct: 236 ESLDGFELEGR 246
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LY GNL + +A I D + +V + NR GQS+GF +++ + + +++
Sbjct: 86 KLYFGNLPYNVDSATLAQIIQDFANPELVEVLY--NRDTGQSRGFAFVTMSNVEDCNIII 143
Query: 440 ERL 448
+ L
Sbjct: 144 DNL 146
>UniRef50_O81989 Cluster: Cp33Hv; n=4; BEP clade|Rep: Cp33Hv -
Hordeum vulgare (Barley)
Length = 344
Score = 35.9 bits (79), Expect = 0.84
Identities = 17/78 (21%), Positives = 39/78 (50%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL + T ++ A S+ G D DV+ ++ +S+GF +++ + + +
Sbjct: 109 RIYVGNLPYTFTAAELTAAFSEAGSVD--DVQIIYDKITDRSRGFAFVTMATAEEAAKAV 166
Query: 440 ERLSXKXIHGQHPXLTLP 493
+ + + G+ + P
Sbjct: 167 QMFNGALLGGRTVRVNFP 184
>UniRef50_A6QZK0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 318
Score = 35.9 bits (79), Expect = 0.84
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L++GNL++ TD+++ + D+ D DV+ ++ G+ +GF +S + ME
Sbjct: 203 LFIGNLSFEMTDRELNDLFRDIPNVD--DVRVSVDKRTGRPRGFAHADFLDVESAKAAME 260
Query: 443 RLSXKXIHGQHPXL--TLPTKQAL 508
L K +G+ L +L TK L
Sbjct: 261 ILKEKAPYGRPLRLDYSLNTKDML 284
>UniRef50_UPI0000499FA7 Cluster: RNA-binding protein; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 206
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/70 (22%), Positives = 36/70 (51%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+GN+ + +T++D+ N I G + ++ G++KGF ++ + + +
Sbjct: 15 LYIGNIPYSSTEKDVKNFIQYDGCK----ITMVTDKNTGKTKGFAFVAFETHEQALEIKN 70
Query: 443 RLSXKXIHGQ 472
+L K + G+
Sbjct: 71 KLQGKELEGR 80
>UniRef50_O97318 Cluster: RNA-binding protein, putative; n=2;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium falciparum (isolate 3D7)
Length = 309
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +Y+GNL T+ DI S G + DV + G+SKG+C +S
Sbjct: 29 HDQYRDSSYIYIGNLDNRLTEGDIVIVFSQYG--EPIDVNLVRDNETGKSKGYCFLSYAD 86
Query: 416 DQSVRMVMERLS 451
+S + ++ +
Sbjct: 87 QRSTILAVDNFN 98
>UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 640
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+LYVG+L + TD+ + G ++ D+ G+SKGFC I + + +
Sbjct: 403 RLYVGSLHFSLTDEAVKTVFEPFGEIEYVDLH--REPETGKSKGFCFIQFKKAEDAKKAL 460
Query: 440 ERLS 451
E+++
Sbjct: 461 EQMN 464
>UniRef50_UPI0000F1F0C3 Cluster: PREDICTED: similar to LOC561459
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
LOC561459 protein - Danio rerio
Length = 329
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L+VG L W T + + N S G + D ++++ QS+GF + VR V+
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYG--EVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVL 81
Query: 440 E 442
+
Sbjct: 82 D 82
>UniRef50_Q5ZYW0 Cluster: RNA binding protein, cold-inducible rrm;
n=3; Legionella pneumophila|Rep: RNA binding protein,
cold-inducible rrm - Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 /ATCC 33152 / DSM
7513)
Length = 92
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL + T++ ++ S G +++ ++R GQ KGF I+ + Q +
Sbjct: 6 KIYVGNLPFGTTEEALSIQFSQYG--KIEEMFLIKDRLTGQMKGFGFITFSAQQEAESAL 63
Query: 440 E 442
E
Sbjct: 64 E 64
>UniRef50_Q8W2K5 Cluster: Phragmoplastin-interacting protein PHIP1;
n=3; Arabidopsis thaliana|Rep:
Phragmoplastin-interacting protein PHIP1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 597
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGF 394
++Y+GNL W T++DI SD ++ V+ +N+ G+ KG+
Sbjct: 263 RVYIGNLAWDTTERDIRKLFSDCVIN---SVRLGKNKETGEFKGY 304
>UniRef50_Q01CD9 Cluster: CwfJ / zinc finger; n=2; Ostreococcus|Rep:
CwfJ / zinc finger - Ostreococcus tauri
Length = 752
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YV NL+W A I+ + G + DV + +GQS+G+C I+ + + V+ +E
Sbjct: 96 VYVRNLSWKADVGAISEYFGECG--ELVDVHL-ARKPDGQSRGYCFIAFATAEGVQAALE 152
Query: 443 R 445
R
Sbjct: 153 R 153
>UniRef50_A7PA84 Cluster: Chromosome chr14 scaffold_9, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_9, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 597
Score = 35.1 bits (77), Expect = 1.5
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 230 PVHGHHG-RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVIS 406
P+ H + +++VG L+ T+ +I S G + +V+ ++ NG+SKG+C +
Sbjct: 57 PITSRHAVKGSEVFVGGLSRTITESNIREVFSTCG--EIIEVRMMTDQ-NGKSKGYCFVR 113
Query: 407 LGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTRS 541
+ ++ ++ S + G+ + T Q F + K +S
Sbjct: 114 FTTKEAANKAIKEKSGFMVEGKKIGVVPSTDQTTLFFGNLPKGQS 158
>UniRef50_A7SMA3 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 259
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
++ Y+GNL++ +Q + V D VK +R G+ +GF ++ GS+ +
Sbjct: 112 YKCYIGNLSYSVDEQALEEKFHGYNVVD---VKVITDRETGRPRGFGFVTFGSEDEMDKA 168
Query: 437 MERLSXKXIHGQ 472
+++ + + G+
Sbjct: 169 IDKFDGEDLDGR 180
>UniRef50_A4HV49 Cluster: Putative uncharacterized protein; n=1;
Leishmania infantum|Rep: Putative uncharacterized
protein - Leishmania infantum
Length = 845
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 125 ISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQ- 301
+ + + P G PP+ A P E +GN S H + LY N +DQ
Sbjct: 367 VGSSIASPAPGAAPPVAATTPSPEEHADGNDSAHPAAISCTVEKKTLYGNNEVIHGSDQD 426
Query: 302 DIANAIS 322
DIA A+S
Sbjct: 427 DIATAVS 433
>UniRef50_Q5KC60 Cluster: Polyadenylation factor 64 kDa subunit,
putative; n=2; Filobasidiella neoformans|Rep:
Polyadenylation factor 64 kDa subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 455
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/80 (21%), Positives = 40/80 (50%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++V N+ + +++ +AN S+ G ++KF N G+SKG+ + + + +
Sbjct: 9 VFVANIPYDVSEEQLANVFSEAGPVANVEIKFDAN--TGRSKGYAFVQFYDEATALSAVR 66
Query: 443 RLSXKXIHGQHPXLTLPTKQ 502
L ++G++ + L T +
Sbjct: 67 NLQDAPVNGRNLRVELSTDE 86
>UniRef50_Q5BD63 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 489
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+GN+ + TD+D+ + + D + DV+ +R +G +G+ QS + E
Sbjct: 402 LYIGNVPFEMTDRDLNDLVKD--LDGLTDVRVTVDRQSGALRGYIHAEFLDIQSAMVAHE 459
Query: 443 RLSXKXIHGQHPXLTL-PTKQALNXF 517
+L+ + +G+ + TK A F
Sbjct: 460 KLAQRRPYGRRLKIDYSKTKSAQGGF 485
>UniRef50_P48809 Cluster: Heterogeneous nuclear ribonucleoprotein
27C; n=11; Endopterygota|Rep: Heterogeneous nuclear
ribonucleoprotein 27C - Drosophila melanogaster (Fruit
fly)
Length = 421
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>UniRef50_UPI000023D975 Cluster: hypothetical protein FG10273.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10273.1 - Gibberella zeae PH-1
Length = 552
Score = 34.7 bits (76), Expect = 1.9
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = +2
Query: 83 DEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRF- 259
DE+ ++ D DD + G G H ++ A +G VH +
Sbjct: 66 DEYMTQDQDDDDDDVDFNLGGGGGGYGSHTGQAGMHDDDQ----APPYGTVHKASAKEDG 121
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++++G L W TDQ + + + G + + + + G+S+GF ++ ++V +VM
Sbjct: 122 KMFIGGLNWETTDQSLRDYFAQFG--EVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVM 179
>UniRef50_Q9HEH4 Cluster: Related to heterogeneous nuclear
ribonucleoprotein; n=13; Fungi/Metazoa group|Rep:
Related to heterogeneous nuclear ribonucleoprotein -
Neurospora crassa
Length = 503
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+++G L W TDQ + + S G + + + A G+S+GF ++ ++V +VM
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFG--EVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVM 57
>UniRef50_Q6CQW2 Cluster: Similarities with sp|Q8J1F4 Ashbya
gossypii Yib1; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|Q8J1F4 Ashbya gossypii Yib1 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 345
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+T AT + + D G + V N+ G KG+ I S S+ +E
Sbjct: 105 IFVGNITTEATAETLEEHFKDCG--EVVRVTILYNKLTGAPKGYAYIEFESSDSIPKALE 162
Query: 443 RLSXKXIHGQ 472
L +HG+
Sbjct: 163 -LKDSELHGE 171
>UniRef50_A5E562 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 510
Score = 34.7 bits (76), Expect = 1.9
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISD-VGVSD-FQDVKFFENRANGQSKGFCVISLGSDQSVR 430
++ YV NL W T+QD+ D + +D D+K +R GQ KG ++ + + +
Sbjct: 87 YKAYVNNLPWDITEQDVIRHFEDRMQANDIISDIKLPLDRETGQIKGVAYVTFTTRELLE 146
Query: 431 MVMERLSXKXIHGQHPXLTL-PTKQALNXFESQ 526
+ LS +G+ + + P +Q + F S+
Sbjct: 147 ESL-NLSMSEFNGRRMFVNVAPPQQGNDRFGSR 178
>UniRef50_P19683 Cluster: 31 kDa ribonucleoprotein, chloroplast
precursor; n=23; Magnoliophyta|Rep: 31 kDa
ribonucleoprotein, chloroplast precursor - Nicotiana
sylvestris (Wood tobacco)
Length = 315
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
+++YVGN+ W D + S+ G + +R G+S+GF +++ S+ +
Sbjct: 230 YRIYVGNIPWGIDDARLEQLFSEHG--KVVSARVVYDRETGRSRGFGFVTMASEAEMSDA 287
Query: 437 MERLSXKXIHGQ 472
+ L + + G+
Sbjct: 288 IANLDGQSLDGR 299
>UniRef50_A6GEZ0 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 80
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R LY+G L A D + + D G +++ R NG+ +GF ++ SD
Sbjct: 3 RTTLYIGGLQAAADDASVRGLVGDFGA--ISEIRL-ATRDNGECRGFAYVTFESDLDAAK 59
Query: 434 VMERLSXKXIHGQ 472
L + + GQ
Sbjct: 60 ARVALDGRTVSGQ 72
>UniRef50_O24306 Cluster: Ribonucleoprotein; n=3; Pisum sativum|Rep:
Ribonucleoprotein - Pisum sativum (Garden pea)
Length = 291
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL+W D + S+ G + +R G+S+GF +++ ++ + +
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHG--KVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAI 264
Query: 440 ERLSXKXIHGQ 472
L + + G+
Sbjct: 265 AALDGQILEGR 275
>UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 1035
Score = 34.3 bits (75), Expect = 2.6
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Frame = +2
Query: 167 PIIAPNQHPPEETNGNASYHG----PVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG- 331
PI++ + HPP+ + PV + R +Y+G++ W T+ + + S G
Sbjct: 737 PILSQSHHPPQHPTPDVPKPNESAPPVPINEASR--IYIGSINWNVTEDQVRSIFSQFGR 794
Query: 332 -VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQAL 508
+S F +N G+ KGF + +S + ++ + G+ + PTK +
Sbjct: 795 VISCF----LMQNADTGKHKGFGFVDFELKKSADDAIATMNGFELLGRSIKVGRPTKSSN 850
Query: 509 N 511
N
Sbjct: 851 N 851
>UniRef50_Q1DPW0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 147
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L++G L W TD+ + S G ++ ++R +S+GF + S+ M
Sbjct: 3 KLFIGGLAWHTTDETLRQGFSKFG--SIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAM 60
Query: 440 ERLSXKXIHGQ 472
++ + G+
Sbjct: 61 NEMNNQEFDGR 71
>UniRef50_A0KJ75 Cluster: RNA-binding protein; n=5; Bacteria|Rep:
RNA-binding protein - Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240)
Length = 95
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL++ T ++ S G D D+ +R GQSKGF I + + +
Sbjct: 5 KIYVGNLSYRMTADELTTVFSQFGQVDKVDI--IIDRDTGQSKGFGFIEMPVNGEAEKAI 62
Query: 440 ERLSXKXIHGQ 472
L I G+
Sbjct: 63 AGLHGTEIGGR 73
>UniRef50_Q01JD7 Cluster: OSIGBa0130P02.2 protein; n=7; Poaceae|Rep:
OSIGBa0130P02.2 protein - Oryza sativa (Rice)
Length = 1048
Score = 33.9 bits (74), Expect = 3.4
Identities = 38/148 (25%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Frame = +2
Query: 11 VKWRTAMSI*ICTPTDIXSDFNRQDEFAGENVDLYDDVISAPASKPEDGDGPPIIAPNQH 190
V WR+ +I + TD + + E + D+ +S ED D IIA Q
Sbjct: 212 VIWRSGSTIILYRGTDYKYPYFQDREMKND----MDESSEHTSSDDEDAD-LAIIASEQS 266
Query: 191 PPEETNGNASYHGPVHGHHG----RRF--QLYVGNLTWWATDQDIANAISDVGVSDFQDV 352
EE + N + HG H G RRF GNL + +Q I +A D
Sbjct: 267 GSEEDSDNPAEHGSNHTEEGDDLTRRFGVDALEGNLDIGSAEQSINSATKDQQAILHTST 326
Query: 353 KFFE-NRANGQSKGFCVISLGSDQSVRM 433
+ +G+++ V +GS R+
Sbjct: 327 NVSRPSEISGRARSTLVAGVGSPNKFRL 354
>UniRef50_A7RK53 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 985
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 293 TDQD-IANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLS 451
T++D I A+S + V D++ +++ G S+GFC + L + + ++E ++
Sbjct: 363 TNEDAIQAALSAITVLPIYDIRLIKDKVTGTSRGFCFVELATIEEATQLLELIA 416
>UniRef50_Q6MVP3 Cluster: Related to heterogeneous nuclear
ribonucleoprotein HRP1; n=3; Neurospora crassa|Rep:
Related to heterogeneous nuclear ribonucleoprotein HRP1
- Neurospora crassa
Length = 344
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L++GN+ + TD ++ N VG+ +DV+ +RA G +GF ++ +E
Sbjct: 180 LFIGNIPYETTDAELNNIF--VGIDGLKDVRVAVDRATGWPRGFAHADFVDVEAAVNALE 237
Query: 443 RL 448
+L
Sbjct: 238 KL 239
>UniRef50_Q6CBR2 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 318
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/97 (24%), Positives = 44/97 (45%)
Frame = +2
Query: 182 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 361
NQ E T+ +AS+H + +Y+G L T+ DIA S G + VK
Sbjct: 10 NQELAEGTSISASWHND----YNDTAYIYIGGLESKLTEMDIATVFSQFG--NPTHVKLS 63
Query: 362 ENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
++ G+S+GF + +S + ++ + + G+
Sbjct: 64 RDQKTGKSRGFAWLKYEDQRSTVLAVDNFNGVELLGR 100
>UniRef50_A6RQM3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 376
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
F+L+VGNL TD+ + A S + Q + ++ +SKG+ +S
Sbjct: 243 FRLFVGNLAGEVTDESLHKAFS--RWTSLQKARVIRDKRTTKSKGYGFVSFSDGDDFFQA 300
Query: 437 MERLSXKXIHGQHPXL 484
+ K I G HP L
Sbjct: 301 ARDMQGKYI-GSHPVL 315
>UniRef50_A4RNA8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 279
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
LY+GN+ + +TD + N D + +DV+ +R+ G +GF +S +E
Sbjct: 171 LYIGNIPYESTDAALNNLFQD--LEGLKDVRIAVDRSTGWPRGFAHADFKDVESATKAVE 228
Query: 443 RLSXKXIHGQ 472
++ + G+
Sbjct: 229 KVKLMELMGR 238
>UniRef50_Q6P3S6 Cluster: F-box only protein 42; n=34;
Euteleostomi|Rep: F-box only protein 42 - Homo sapiens
(Human)
Length = 717
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 499 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 542
>UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA binding
motif protein 24; n=3; Endopterygota|Rep: PREDICTED:
similar to RNA binding motif protein 24 - Tribolium
castaneum
Length = 318
Score = 33.5 bits (73), Expect = 4.5
Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Frame = +2
Query: 137 ASKPEDGDGPPIIAPNQHPPEETNG--------NASYHGPVHGHHGRRFQLYVGNLTWWA 292
AS P + ++ P+ P E +G N + + V +L+VG L +
Sbjct: 41 ASDPSEDQSAKMLMPSGLPANEADGLGLGGLGTNTNTNNGVQHKDTTWTKLFVGGLPYHT 100
Query: 293 TDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQS 424
TDQ + S G + ++ +R G+S+G+ + +G S
Sbjct: 101 TDQSLREHFSVYG--EIEEAVVITDRQTGKSRGYGFVIMGDKSS 142
>UniRef50_Q1LVU9 Cluster: Cold inducible RNA binding protein; n=8;
Clupeocephala|Rep: Cold inducible RNA binding protein -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 223
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/71 (23%), Positives = 36/71 (50%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L++G L++ T+Q + A S G DV +R +S+GF ++ + + + M
Sbjct: 23 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDV--IRDRETDRSRGFGFVTFENPEDAKDAM 80
Query: 440 ERLSXKXIHGQ 472
++ K + G+
Sbjct: 81 AAMNGKQVDGR 91
>UniRef50_Q83D11 Cluster: RNA-binding protein; n=3; Coxiella
burnetii|Rep: RNA-binding protein - Coxiella burnetii
Length = 129
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVIS 406
Q+YVGNL + + D+ S G + VK N G+SKG+ ++
Sbjct: 45 QIYVGNLPYHVVENDLHQYFSRFGA--IESVKIVRNFRTGRSKGYAFVT 91
>UniRef50_Q01Q04 Cluster: RNP-1 like RNA-binding protein; n=1;
Solibacter usitatus Ellin6076|Rep: RNP-1 like
RNA-binding protein - Solibacter usitatus (strain
Ellin6076)
Length = 138
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIAN--AISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVR 430
F +++GNL W T DI A D+ V+D VK N +SKGF + ++ ++
Sbjct: 3 FTVFLGNLPTWVTADDIKQWLAAEDL-VAD--AVKVIRNHETQESKGFAFVEAPTNDEMQ 59
Query: 431 MVMER 445
++ R
Sbjct: 60 SIIRR 64
>UniRef50_A0VLS8 Cluster: Putative uncharacterized protein; n=1;
Dinoroseobacter shibae DFL 12|Rep: Putative
uncharacterized protein - Dinoroseobacter shibae DFL 12
Length = 719
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -2
Query: 239 REPGRGMRRCR*FPQVDAGLEQ*WEDRHRPRASKLVLRSR-RHINPHFRQQIHPG 78
RE G+R D L Q DRH PR S+L R R++ P R HPG
Sbjct: 11 REVHHGLRNA----PADRALFQPRSDRHHPRRSRLRRHGRGRYLGPFLRDPAHPG 61
>UniRef50_Q2HTD6 Cluster: RNA-binding region RNP-1 (RNA recognition
motif); Calcium-binding EF- hand; n=1; Medicago
truncatula|Rep: RNA-binding region RNP-1 (RNA
recognition motif); Calcium-binding EF- hand - Medicago
truncatula (Barrel medic)
Length = 559
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/71 (19%), Positives = 35/71 (49%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++++G L +D D+ +G D ++K ++R G+SKG+ + + + + +
Sbjct: 105 EVFIGGLPRDTSDDDVRELCEPMG--DIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAI 162
Query: 440 ERLSXKXIHGQ 472
+ + K G+
Sbjct: 163 DDIHNKEFKGK 173
>UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 288
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +2
Query: 266 YVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMER 445
Y GNL W +++ + + + GV+ Q ++ G+SKG+ ++ + + + +E+
Sbjct: 115 YFGNLAWETSEETLTSHCASFGVNVVQCE--VARQSGGRSKGWALVDFATPEEAQNAIEQ 172
Query: 446 LSXKXIHGQ 472
+ I G+
Sbjct: 173 MHNSEIQGR 181
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G +LYVGN+ W T +D+ ++ G D+ G+S+G+ ++ S+
Sbjct: 6 GSSARLYVGNIPWSTTIEDLRELFAECGGVTRVDI---PTGRQGRSRGYGLVEFNSEAEA 62
Query: 428 RMVMERL 448
+ + R+
Sbjct: 63 QAAVTRM 69
>UniRef50_Q6TMI9 Cluster: RNA-binding protein; n=3; Dictyostelium
discoideum|Rep: RNA-binding protein - Dictyostelium
discoideum (Slime mold)
Length = 551
Score = 33.5 bits (73), Expect = 4.5
Identities = 12/71 (16%), Positives = 37/71 (52%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+++ G + ++++ ++ ++ +++ +++ G+SKGF + R V+
Sbjct: 93 EIFFGGVNKTVNEEELLEIFNENSDNNVLEIRLMKDKLTGESKGFGFVLFNDRSMCRNVI 152
Query: 440 ERLSXKXIHGQ 472
++L+ K I G+
Sbjct: 153 DKLNGKSIKGK 163
>UniRef50_Q5DE20 Cluster: SJCHGC05387 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC05387 protein - Schistosoma
japonicum (Blood fluke)
Length = 348
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+++G+L + + I A G + VK N+A GQ+ G+ I + S R M
Sbjct: 8 IWMGDLEPYMDEMFIKRAFETSG-ENIVSVKVIRNKATGQTLGYGFIEFANSTSARDAML 66
Query: 443 RLSXKXIHG 469
+L+ K I G
Sbjct: 67 KLNGKLIPG 75
>UniRef50_Q5CSH1 Cluster: Ro ribonucleoprotein-binding protein 1,
RNA binding protein with 3x RRM domains; n=2;
Cryptosporidium|Rep: Ro ribonucleoprotein-binding
protein 1, RNA binding protein with 3x RRM domains -
Cryptosporidium parvum Iowa II
Length = 693
Score = 33.5 bits (73), Expect = 4.5
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVG+L + + D+ G D+ R +SKGFC I S +S M +
Sbjct: 291 RIYVGSLDYSLNEADLKQVFGSFGPIVNIDMP----REGNRSKGFCFIEYTSQESAEMAL 346
Query: 440 ERLSXKXIHGQHPXLTLPTKQA 505
++ + G+ + PT A
Sbjct: 347 ATMNRFVLKGRPIRVGRPTNAA 368
>UniRef50_Q2UQ21 Cluster: Predicted protein; n=3;
Pezizomycotina|Rep: Predicted protein - Aspergillus
oryzae
Length = 127
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/71 (19%), Positives = 32/71 (45%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L++G L W TD+ + + G ++ ++R G+S+GF + S+
Sbjct: 3 KLFIGGLAWHTTDESLRSGFEKYGA--VEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAA 60
Query: 440 ERLSXKXIHGQ 472
++ + G+
Sbjct: 61 HEMNNQEFDGR 71
>UniRef50_O94432 Cluster: mRNA cleavage factor complex subunit; n=1;
Schizosaccharomyces pombe|Rep: mRNA cleavage factor
complex subunit - Schizosaccharomyces pombe (Fission
yeast)
Length = 474
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/83 (24%), Positives = 34/83 (40%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E NA P + G+ F +G L W TD + + G + D +
Sbjct: 146 ESNEDNAEETSPFNREDGKMF---IGGLNWETTDDSLRDYFEQFG--EVLDCTVMRDSTT 200
Query: 377 GQSKGFCVISLGSDQSVRMVMER 445
G+S+GF ++ + + V VM +
Sbjct: 201 GRSRGFGFLTFKNPKCVNEVMSK 223
>UniRef50_A5DYN8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 552
Score = 33.5 bits (73), Expect = 4.5
Identities = 20/83 (24%), Positives = 41/83 (49%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
+ +G + GP+ G ++FQ+++G+L + T++ I S + VS VK +R N
Sbjct: 94 QSQSGQSGQLGPLGGQQHQQFQMWMGDLDPYWTEESIKTMWSTL-VSAPIFVKIVRDRVN 152
Query: 377 GQSKGFCVISLGSDQSVRMVMER 445
F + S + + + ++R
Sbjct: 153 PLKPQFAFVGFDSQELLDLAVKR 175
>UniRef50_A1CJX8 Cluster: Glycine-rich RNA-binding protein,
putative; n=2; Aspergillus|Rep: Glycine-rich RNA-binding
protein, putative - Aspergillus clavatus
Length = 133
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+L++G L W TD + G ++ ++R +S+GF + SD M
Sbjct: 3 KLFIGGLAWHTTDDALRQGFEQFG--QVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAM 60
Query: 440 ERLSXKXIHGQ 472
+ ++ + G+
Sbjct: 61 DAMNNQEFDGR 71
>UniRef50_Q44560 Cluster: Putative RNA-binding protein rbpA; n=4;
Bacteria|Rep: Putative RNA-binding protein rbpA -
Anabaena sp. (strain PCC 7120)
Length = 102
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGNL++ T ++ ++ G + V+ +R GQ +GF + +GS+ +E
Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGT--VKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIE 60
Query: 443 RL 448
L
Sbjct: 61 AL 62
>UniRef50_Q9Y388 Cluster: RNA-binding motif protein, X-linked 2;
n=39; Coelomata|Rep: RNA-binding motif protein, X-linked
2 - Homo sapiens (Human)
Length = 322
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/79 (21%), Positives = 36/79 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>UniRef50_UPI0000546443 Cluster: PREDICTED: hypothetical protein;
n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 163
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +YVGN+ + AT ++ + G + + + NR G KGF I +SVR
Sbjct: 36 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPY--NRFTGHPKGFAYIEFSDRESVRT 93
Query: 434 VM 439
M
Sbjct: 94 AM 95
>UniRef50_Q6ID29 Cluster: At4g13860; n=9; cellular organisms|Rep:
At4g13860 - Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++YVGNL+ TD + A S G + D +R +S+GF ++ S +
Sbjct: 4 RVYVGNLSPTTTDDMLREAFS--GYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 440 ERLSXKXIHGQHPXLTL 490
+ K ++G+ + L
Sbjct: 62 SGMDGKELNGRRVSVKL 78
>UniRef50_Q4W5P0 Cluster: Homologous to drosophila sqd (Squid)
protein protein 1, isoform b; n=3; Caenorhabditis|Rep:
Homologous to drosophila sqd (Squid) protein protein 1,
isoform b - Caenorhabditis elegans
Length = 308
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 206 NGNASYHGPVHGHHGRRFQ---LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
NGNAS +GH + + ++VG ++ ++D+++ + G VK+ +R N
Sbjct: 9 NGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY--DRTN 66
Query: 377 GQSKGFCVISLGSDQSVRMVM 439
G+S+GF + + + ++ +
Sbjct: 67 GRSRGFAFVEFTTGEGCKLAL 87
>UniRef50_A7AW01 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 279
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 269 VGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERL 448
VGNL + T+ ++ N + G F ++ ++R +SKG+ + D +RL
Sbjct: 25 VGNLPYEITEIELRNILQGCGNIRFAIIR--KDRQTNKSKGYAHVEYRYDWEAVAAFKRL 82
Query: 449 SXKXIHGQ 472
K IHG+
Sbjct: 83 LGKEIHGR 90
>UniRef50_Q6BRG5 Cluster: Similar to CA0922|IPF12991 Candida
albicans IPF12991; n=1; Debaryomyces hansenii|Rep:
Similar to CA0922|IPF12991 Candida albicans IPF12991 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 265
Score = 33.1 bits (72), Expect = 5.9
Identities = 18/90 (20%), Positives = 38/90 (42%)
Frame = +2
Query: 182 NQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFF 361
N+ +E N S H + +Y+G L + + DI S G+ +
Sbjct: 8 NKINQKELENNVSDSASWHADYKDTSYIYIGFLPFDLNEMDIVKIFSQYGIPTH--INLI 65
Query: 362 ENRANGQSKGFCVISLGSDQSVRMVMERLS 451
+++ G+S+GFC + +S + ++ +
Sbjct: 66 KDKETGKSRGFCYLKYEDYKSCVLAIDNFN 95
>UniRef50_O94290 Cluster: RNA-binding protein Cwf29; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein Cwf29
- Schizosaccharomyces pombe (Fission yeast)
Length = 217
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +Y+GNL + + DI S+ G + D+ ++ G+SKGF +
Sbjct: 24 HQDYSDSAYIYIGNLDFDLNEDDILCVFSEFG--EPVDINLVRDKETGKSKGFAFLKYED 81
Query: 416 DQSVRMVMERLS 451
+S + ++ ++
Sbjct: 82 QRSTVLAVDNMT 93
>UniRef50_A6R4B0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 416
Score = 33.1 bits (72), Expect = 5.9
Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Frame = +2
Query: 194 PEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISD-VGVSDFQDVKFFENR 370
P +GN GRR LYVGN+ + A +D+ ++ V + + V +
Sbjct: 99 PRRDHGNTDSPTTNSFSEGRR--LYVGNMPYMAKKKDVEALFTEGETVYNVERVDISIDP 156
Query: 371 ANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ----HPXLTLPTKQALNXFESQSK 532
G++ +C + L S + M L+ K + G+ P + +K+ L Q+K
Sbjct: 157 FTGRNPSYCFVELESKAQADLAMAELNGKDMLGRPVTIKPGIPKSSKEPLFGRRDQTK 214
>UniRef50_A4QRR2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 295
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISL-GSDQS 424
GRR +Y+GNL + D+ + G +++ VK + + +++G+C + +D++
Sbjct: 16 GRR--IYIGNLNYELQSSDVEGMLQQSGFPNYEAVKIPVDPGSQRNRGYCFVDFTTADEA 73
Query: 425 VRMVME 442
R + E
Sbjct: 74 QRSLSE 79
>UniRef50_Q44554 Cluster: Putative RNA-binding protein rbpB; n=41;
Bacteria|Rep: Putative RNA-binding protein rbpB -
Anabaena sp. (strain PCC 7120)
Length = 103
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGNL++ T++ + ++ G + V+ +R G+ +GF + +GSD +E
Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYG--SVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIE 60
Query: 443 RL 448
L
Sbjct: 61 AL 62
>UniRef50_Q99383 Cluster: Nuclear polyadenylated RNA-binding protein
4; n=7; Saccharomycetales|Rep: Nuclear polyadenylated
RNA-binding protein 4 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 534
Score = 33.1 bits (72), Expect = 5.9
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++++G L W T+ ++ G D+K ++ A G+S+GF +S SV V+
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGT--VTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVV 217
Query: 440 E 442
+
Sbjct: 218 K 218
>UniRef50_A4B4X2 Cluster: RNA-binding protein; n=1; Alteromonas
macleodii 'Deep ecotype'|Rep: RNA-binding protein -
Alteromonas macleodii 'Deep ecotype'
Length = 154
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + G LYVGNL + A + + S + Q V+ ++R G+ KG+ I + +
Sbjct: 65 HSNEGSIETLYVGNLPYRANENAVKEYFS--SFIEVQSVRLMKDRKTGKRKGYGFIEVVT 122
Query: 416 D 418
D
Sbjct: 123 D 123
>UniRef50_A0TAE1 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia ambifaria MC40-6|Rep:
Putative uncharacterized protein precursor -
Burkholderia ambifaria MC40-6
Length = 423
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = -2
Query: 338 RRHRHPRSRSQYLGPLPTMLGCRRKVENGGHDVREPGR 225
RR RH LGP P RR VE+G HD RE GR
Sbjct: 112 RRGRHDARHRPRLGPRPA----RRVVESGRHDGREHGR 145
>UniRef50_Q9FFZ6 Cluster: Similarity to RNA-binding protein; n=2;
core eudicotyledons|Rep: Similarity to RNA-binding
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS-DQSVRMV 436
+L++G L++ T+Q ++ A S G + + +R + +SKGF ++ S D++ + +
Sbjct: 35 KLFIGGLSFCTTEQGLSEAFSKCG--QVVEAQIVMDRVSDRSKGFGFVTFASADEAQKAL 92
Query: 437 ME 442
ME
Sbjct: 93 ME 94
>UniRef50_Q7EY44 Cluster: Water-stress protein-like protein; n=5;
Oryza sativa|Rep: Water-stress protein-like protein -
Oryza sativa subsp. japonica (Rice)
Length = 465
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQS-KGFCVISLGSDQSVRMV 436
++ VG L A ++D+A A++D G D ++V+ + A+ +S KGF + + R
Sbjct: 91 EVLVGGLPRDAAEEDVARALADAG--DVEEVRLVRDPADPRSNKGFAFVRFAAAWQARWA 148
Query: 437 MERLSXKXIHGQ 472
+ + + G+
Sbjct: 149 ADDVRTAMVKGE 160
>UniRef50_A4S2D6 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 194
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGNL W Q++ + VG DV +G+S+G+ V++ Q ++ +E
Sbjct: 116 VYVGNLPWSTRWQELKDIFRKVGNVAHADVTM---GFDGRSRGWGVVTFMDPQCAQVAIE 172
Query: 443 RLS 451
RL+
Sbjct: 173 RLN 175
>UniRef50_A2Y1R0 Cluster: Putative uncharacterized protein; n=7;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 104
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/76 (22%), Positives = 41/76 (53%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G+ ++YVGNL + A ++ + ++ ++ G + +R G+S+GF +S +S
Sbjct: 20 GQESRVYVGNLPYRADERSLKDSFANYGAVSSE---IAVDRETGRSRGFGFVSFQDSKSA 76
Query: 428 RMVMERLSXKXIHGQH 475
++ ++ + I G++
Sbjct: 77 SDAIKGMNGQDIGGRN 92
>UniRef50_Q5K8E1 Cluster: Protein-nucleus import-related protein,
putative; n=2; Filobasidiella neoformans|Rep:
Protein-nucleus import-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 563
Score = 32.7 bits (71), Expect = 7.8
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAIS-DVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +LYVGNL + +D+AN + G F +V GQSKG ++ S +
Sbjct: 169 RENRLYVGNLAYDCNYKDLANFMERGGGKVVFSEVL---TTPAGQSKGCGIVEFASQEEA 225
Query: 428 RMVMERLSXKXIHGQ 472
+ LS K G+
Sbjct: 226 QRAKAELSDKAFFGR 240
>UniRef50_A5DYR4 Cluster: Putative uncharacterized protein; n=5;
Saccharomycetales|Rep: Putative uncharacterized protein
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 224
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/70 (21%), Positives = 35/70 (50%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
+YVGN+ + +T + I VG+ + + F ++ +G KG+ + + ++ + +E
Sbjct: 68 VYVGNVDYQSTPEQIEELFHKVGIVERVTILF--DKFSGLPKGYAYVEFQTPENAKKAVE 125
Query: 443 RLSXKXIHGQ 472
L + G+
Sbjct: 126 ELHGESFRGR 135
>UniRef50_A2QMH2 Cluster: Contig An07c0030, complete genome.
precursor; n=5; Trichocomaceae|Rep: Contig An07c0030,
complete genome. precursor - Aspergillus niger
Length = 441
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = +2
Query: 218 SYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFC 397
S H P GRR LYVGN+ + A +D+ A+ D + + + G++ +C
Sbjct: 151 SPHVPQAISEGRR--LYVGNMPYTAKSEDV-QALFDAAEFRIERIDIAIDPFTGRNPSYC 207
Query: 398 VISLGSDQSVRMVMERLSXKXIHGQ 472
+ L + + M L + + G+
Sbjct: 208 FVDLETKELAERAMTELDGRDMLGR 232
>UniRef50_P31483 Cluster: Nucleolysin TIA-1 isoform p40 (RNA-binding
protein TIA-1) (p40-TIA-1) [Contains: Nucleolysin TIA-1
isoform p15 (p15-TIA-1)]; n=23; Euteleostomi|Rep:
Nucleolysin TIA-1 isoform p40 (RNA-binding protein
TIA-1) (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform
p15 (p15-TIA-1)] - Homo sapiens (Human)
Length = 386
Score = 32.7 bits (71), Expect = 7.8
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
F ++VG+L+ T +DI A + G D + ++ A G+SKG+ +S +
Sbjct: 106 FHVFVGDLSPQITTEDIKAAFAPFG--RISDARVVKDMATGKSKGYGFVSFFNKWDAENA 163
Query: 437 MERLSXKXIHGQHPXLTLPTKQ---ALNXFESQSKTRS 541
++++ + + G+ T++ + +ES +K S
Sbjct: 164 IQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLS 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,061,519
Number of Sequences: 1657284
Number of extensions: 13453770
Number of successful extensions: 39931
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 37798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39834
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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