Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M13
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 144 3e-34
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 144 3e-34
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 144 3e-34
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 144 3e-34
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 144 3e-34
BX537888-1|CAD97884.1| 500|Homo sapiens hypothetical protein pr... 113 5e-25
BC018135-1|AAH18135.1| 471|Homo sapiens pre-mRNA cleavage facto... 113 5e-25
AJ275970-1|CAC81661.1| 471|Homo sapiens pre-mRNA cleavage facto... 113 5e-25
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 38 0.041
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 36 0.095
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 36 0.095
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.095
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.095
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 36 0.095
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 36 0.095
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 36 0.095
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 36 0.095
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 36 0.095
L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein. 35 0.22
BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein. 35 0.22
BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein. 35 0.22
BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein. 35 0.22
BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear r... 35 0.22
BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear r... 35 0.22
AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear r... 35 0.22
BC063864-1|AAH63864.1| 717|Homo sapiens F-box protein 42 protein. 34 0.51
BC043410-1|AAH43410.1| 716|Homo sapiens F-box protein 42 protein. 34 0.51
BC006174-1|AAH06174.1| 513|Homo sapiens FBXO42 protein protein. 34 0.51
AL358794-1|CAH73774.1| 717|Homo sapiens F-box protein 42 protein. 34 0.51
AL109627-2|CAI22561.1| 299|Homo sapiens F-box protein 42 protein. 34 0.51
AL109627-1|CAI22560.1| 717|Homo sapiens F-box protein 42 protein. 34 0.51
AB037753-1|BAA92570.1| 651|Homo sapiens KIAA1332 protein protein. 34 0.51
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 33 0.67
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 33 0.67
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 33 0.67
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 33 0.67
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 33 0.67
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 33 0.67
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 32 1.5
D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein. 32 1.5
BX537969-1|CAD97933.1| 995|Homo sapiens hypothetical protein pr... 32 1.5
BC024153-1|AAH24153.1| 930|Homo sapiens RNA binding motif prote... 32 1.5
BC008733-1|AAH08733.1| 930|Homo sapiens RNA binding motif prote... 32 1.5
BC004181-1|AAH04181.1| 930|Homo sapiens RNA binding motif prote... 32 1.5
BC000681-1|AAH00681.1| 541|Homo sapiens RBM10 protein protein. 32 1.5
AL833874-1|CAD38731.1| 366|Homo sapiens hypothetical protein pr... 32 1.5
AL513366-5|CAI41701.1| 930|Homo sapiens RNA binding motif prote... 32 1.5
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 32 2.0
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 32 2.0
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 32 2.0
X79201-1|CAA55792.1| 391|Homo sapiens SYT protein. 31 2.7
X69910-1|CAA49535.2| 602|Homo sapiens P63 protein protein. 31 2.7
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 31 2.7
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 31 2.7
CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein. 31 2.7
CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein. 31 2.7
BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma transl... 31 2.7
BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma transl... 31 2.7
BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma transl... 31 2.7
BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma transl... 31 2.7
BC082972-1|AAH82972.1| 602|Homo sapiens cytoskeleton-associated... 31 2.7
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 31 2.7
AK223563-1|BAD97283.1| 602|Homo sapiens cytoskeleton-associated... 31 2.7
AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein. 31 2.7
AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protei... 31 2.7
AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein... 31 2.7
AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein. 31 2.7
AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein. 31 2.7
AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2... 31 2.7
AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2... 31 2.7
AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1... 31 2.7
AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1... 31 2.7
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 31 4.7
EF011619-1|ABK41109.1| 478|Homo sapiens CDW9/WDR51B protein. 30 6.2
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 30 6.2
BC026080-1|AAH26080.1| 478|Homo sapiens WD repeat domain 51B pr... 30 6.2
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 30 6.2
AK074772-1|BAC11198.1| 478|Homo sapiens protein ( Homo sapiens ... 30 6.2
AB053276-1|BAB69430.1| 348|Homo sapiens TUWD12 protein. 30 6.2
AB053266-1|BAB69057.1| 348|Homo sapiens TUWD12 protein. 30 6.2
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 30 8.2
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 30 8.2
X76534-1|CAA54044.1| 560|Homo sapiens NMB protein. 30 8.2
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 30 8.2
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 30 8.2
BT007074-1|AAP35737.1| 206|Homo sapiens glycoprotein (transmemb... 30 8.2
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 30 8.2
BC032783-1|AAH32783.1| 572|Homo sapiens glycoprotein (transmemb... 30 8.2
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 30 8.2
BC011595-1|AAH11595.1| 206|Homo sapiens GPNMB protein protein. 30 8.2
AY359124-1|AAQ89481.1| 572|Homo sapiens NMB protein. 30 8.2
AJ505015-1|CAD43718.1| 206|Homo sapiens glycoprotein nmb-like p... 30 8.2
AF322909-1|AAG42839.1| 560|Homo sapiens transmembrane glycoprot... 30 8.2
AC005082-2|AAP22337.1| 206|Homo sapiens unknown protein. 30 8.2
AC005082-1|AAP22336.1| 560|Homo sapiens unknown protein. 30 8.2
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 144 bits (348), Expect = 3e-34
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Frame = +2
Query: 56 DIXSDFNRQDEFAG-ENVDLYDDVISAPASK---PEDGDGPPIIAPNQHPPEETNGNASY 223
D+ +FN++ E+ G + +DLYDDVIS A+ PED D + P + G +
Sbjct: 13 DVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVG---DDVGKGAA 69
Query: 224 HGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 403
V+ + G+R LY+GNLTWW TD+D+ A+ +GV+D ++KFFENRANGQSKGF ++
Sbjct: 70 PNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALV 129
Query: 404 SLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSK 532
+GS+ S + +M+ L + +HGQ+P +T KQ L+ FE QS+
Sbjct: 130 GVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 172
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 144 bits (348), Expect = 3e-34
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Frame = +2
Query: 56 DIXSDFNRQDEFAG-ENVDLYDDVISAPASK---PEDGDGPPIIAPNQHPPEETNGNASY 223
D+ +FN++ E+ G + +DLYDDVIS A+ PED D + P + G +
Sbjct: 13 DVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVG---DDVGKGAA 69
Query: 224 HGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 403
V+ + G+R LY+GNLTWW TD+D+ A+ +GV+D ++KFFENRANGQSKGF ++
Sbjct: 70 PNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALV 129
Query: 404 SLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSK 532
+GS+ S + +M+ L + +HGQ+P +T KQ L+ FE QS+
Sbjct: 130 GVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 172
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 144 bits (348), Expect = 3e-34
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Frame = +2
Query: 56 DIXSDFNRQDEFAG-ENVDLYDDVISAPASK---PEDGDGPPIIAPNQHPPEETNGNASY 223
D+ +FN++ E+ G + +DLYDDVIS A+ PED D + P + G +
Sbjct: 13 DVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVG---DDVGKGAA 69
Query: 224 HGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 403
V+ + G+R LY+GNLTWW TD+D+ A+ +GV+D ++KFFENRANGQSKGF ++
Sbjct: 70 PNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALV 129
Query: 404 SLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSK 532
+GS+ S + +M+ L + +HGQ+P +T KQ L+ FE QS+
Sbjct: 130 GVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 172
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 144 bits (348), Expect = 3e-34
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Frame = +2
Query: 56 DIXSDFNRQDEFAG-ENVDLYDDVISAPASK---PEDGDGPPIIAPNQHPPEETNGNASY 223
D+ +FN++ E+ G + +DLYDDVIS A+ PED D + P + G +
Sbjct: 13 DVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVG---DDVGKGAA 69
Query: 224 HGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 403
V+ + G+R LY+GNLTWW TD+D+ A+ +GV+D ++KFFENRANGQSKGF ++
Sbjct: 70 PNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALV 129
Query: 404 SLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSK 532
+GS+ S + +M+ L + +HGQ+P +T KQ L+ FE QS+
Sbjct: 130 GVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 172
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 144 bits (348), Expect = 3e-34
Identities = 69/163 (42%), Positives = 104/163 (63%), Gaps = 4/163 (2%)
Frame = +2
Query: 56 DIXSDFNRQDEFAG-ENVDLYDDVISAPASK---PEDGDGPPIIAPNQHPPEETNGNASY 223
D+ +FN++ E+ G + +DLYDDVIS A+ PED D + P + G +
Sbjct: 13 DVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVG---DDVGKGAA 69
Query: 224 HGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVI 403
V+ + G+R LY+GNLTWW TD+D+ A+ +GV+D ++KFFENRANGQSKGF ++
Sbjct: 70 PNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALV 129
Query: 404 SLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSK 532
+GS+ S + +M+ L + +HGQ+P +T KQ L+ FE QS+
Sbjct: 130 GVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSR 172
>BX537888-1|CAD97884.1| 500|Homo sapiens hypothetical protein
protein.
Length = 500
Score = 113 bits (272), Expect = 5e-25
Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +2
Query: 56 DIXSD--FNRQDEFAG-ENVDLYDDVISAPASKPEDGDG---PPIIAPNQHPPEETNGNA 217
DI +D FN+ EF + +DLYDDV++A + +D PP + P+ N
Sbjct: 47 DIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTP 106
Query: 218 SYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFC 397
+ G RR +YVG+ +WW TDQ + I +GV D ++KF ENRANGQSKG+
Sbjct: 107 AILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYA 166
Query: 398 VISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTR 538
+ + S+ SV ++E L K ++G+ + T+Q L+ FE+Q++ R
Sbjct: 167 EVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 213
>BC018135-1|AAH18135.1| 471|Homo sapiens pre-mRNA cleavage factor
I, 59 kDa subunit protein.
Length = 471
Score = 113 bits (272), Expect = 5e-25
Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +2
Query: 56 DIXSD--FNRQDEFAG-ENVDLYDDVISAPASKPEDGDG---PPIIAPNQHPPEETNGNA 217
DI +D FN+ EF + +DLYDDV++A + +D PP + P+ N
Sbjct: 9 DIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTP 68
Query: 218 SYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFC 397
+ G RR +YVG+ +WW TDQ + I +GV D ++KF ENRANGQSKG+
Sbjct: 69 AILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYA 128
Query: 398 VISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTR 538
+ + S+ SV ++E L K ++G+ + T+Q L+ FE+Q++ R
Sbjct: 129 EVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
>AJ275970-1|CAC81661.1| 471|Homo sapiens pre-mRNA cleavage factor
I, 59 kDa subunit protein.
Length = 471
Score = 113 bits (272), Expect = 5e-25
Identities = 60/167 (35%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +2
Query: 56 DIXSD--FNRQDEFAG-ENVDLYDDVISAPASKPEDGDG---PPIIAPNQHPPEETNGNA 217
DI +D FN+ EF + +DLYDDV++A + +D PP + P+ N
Sbjct: 9 DIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPSPKPNNKTP 68
Query: 218 SYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFC 397
+ G RR +YVG+ +WW TDQ + I +GV D ++KF ENRANGQSKG+
Sbjct: 69 AILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYA 128
Query: 398 VISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTR 538
+ + S+ SV ++E L K ++G+ + T+Q L+ FE+Q++ R
Sbjct: 129 EVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKR 175
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 37.5 bits (83), Expect = 0.041
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = +2
Query: 125 ISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQD 304
+ AP E +G I A E + ++ H +++++G L+W T +D
Sbjct: 33 LEAPKGSAES-EGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKD 91
Query: 305 IANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ + S G + D + G+S+GF + +SV VM++ K
Sbjct: 92 LKDYFSKFG--EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 140
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 54 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 113
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 114 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 153
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 36.3 bits (80), Expect = 0.095
Identities = 22/102 (21%), Positives = 44/102 (43%)
Frame = +2
Query: 152 DGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVG 331
+ +G I A E + ++ H +++++G L+W T +D+ + S G
Sbjct: 62 ESEGAKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFG 121
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXK 457
+ D + G+S+GF + +SV VM++ K
Sbjct: 122 --EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHK 161
>L28010-1|AAC37584.1| 415|Homo sapiens HnRNP F protein protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G F + + L W + +D+ N +SD + D F G+ G + LGS+ V
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67
Query: 428 RMVMER 445
+M +++
Sbjct: 68 KMALKK 73
>BC106008-1|AAI06009.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G F + + L W + +D+ N +SD + D F G+ G + LGS+ V
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67
Query: 428 RMVMER 445
+M +++
Sbjct: 68 KMALKK 73
>BC016736-1|AAH16736.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G F + + L W + +D+ N +SD + D F G+ G + LGS+ V
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67
Query: 428 RMVMER 445
+M +++
Sbjct: 68 KMALKK 73
>BC015580-1|AAH15580.1| 415|Homo sapiens HNRPF protein protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G F + + L W + +D+ N +SD + D F G+ G + LGS+ V
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67
Query: 428 RMVMER 445
+M +++
Sbjct: 68 KMALKK 73
>BC004254-1|AAH04254.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G F + + L W + +D+ N +SD + D F G+ G + LGS+ V
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67
Query: 428 RMVMER 445
+M +++
Sbjct: 68 KMALKK 73
>BC001432-1|AAH01432.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G F + + L W + +D+ N +SD + D F G+ G + LGS+ V
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67
Query: 428 RMVMER 445
+M +++
Sbjct: 68 KMALKK 73
>AL512654-2|CAI17066.1| 415|Homo sapiens heterogeneous nuclear
ribonucleoprotein F protein.
Length = 415
Score = 35.1 bits (77), Expect = 0.22
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +2
Query: 248 GRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
G F + + L W + +D+ N +SD + D F G+ G + LGS+ V
Sbjct: 8 GEGFVVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDV 67
Query: 428 RMVMER 445
+M +++
Sbjct: 68 KMALKK 73
>BC063864-1|AAH63864.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 499 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 542
>BC043410-1|AAH43410.1| 716|Homo sapiens F-box protein 42 protein.
Length = 716
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 498 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 541
>BC006174-1|AAH06174.1| 513|Homo sapiens FBXO42 protein protein.
Length = 513
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 295 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 338
>AL358794-1|CAH73774.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 499 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 542
>AL109627-2|CAI22561.1| 299|Homo sapiens F-box protein 42 protein.
Length = 299
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 217 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 260
>AL109627-1|CAI22560.1| 717|Homo sapiens F-box protein 42 protein.
Length = 717
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 499 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 542
>AB037753-1|BAA92570.1| 651|Homo sapiens KIAA1332 protein protein.
Length = 651
Score = 33.9 bits (74), Expect = 0.51
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ A +S P DG D + +HPPE+TNG H P H
Sbjct: 433 SIDLNWDLKPASSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 476
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/79 (21%), Positives = 36/79 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/79 (21%), Positives = 36/79 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/79 (21%), Positives = 36/79 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/79 (21%), Positives = 36/79 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/79 (21%), Positives = 36/79 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 33.5 bits (73), Expect = 0.67
Identities = 17/79 (21%), Positives = 36/79 (45%)
Frame = +2
Query: 236 HGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGS 415
H + +++G L + T+ DI S G + ++ ++ G+SKGFC +
Sbjct: 29 HSEYKDSAWIFLGGLPYELTEGDIICVFSQYG--EIVNINLVRDKKTGKSKGFCFLCYED 86
Query: 416 DQSVRMVMERLSXKXIHGQ 472
+S + ++ + I G+
Sbjct: 87 QRSTILAVDNFNGIKIKGR 105
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
+++++G L+W T +D+ + S G + D + G+S+GF + +SV V
Sbjct: 6 WKMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 63
Query: 437 MERLSXK 457
M++ K
Sbjct: 64 MDQKEHK 70
>D50912-1|BAA09471.1| 1010|Homo sapiens KIAA0122 protein.
Length = 1010
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 290 ATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
AT+ DI + GV ++V+ N+++GQS+GF + Q ME
Sbjct: 221 ATEDDIRGQLQSHGVQA-REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 270
>BX537969-1|CAD97933.1| 995|Homo sapiens hypothetical protein
protein.
Length = 995
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 290 ATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
AT+ DI + GV ++V+ N+++GQS+GF + Q ME
Sbjct: 205 ATEDDIRGQLQSHGVQA-REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 254
>BC024153-1|AAH24153.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 290 ATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
AT+ DI + GV ++V+ N+++GQS+GF + Q ME
Sbjct: 140 ATEDDIRGQLQSHGVQA-REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 189
>BC008733-1|AAH08733.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 290 ATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
AT+ DI + GV ++V+ N+++GQS+GF + Q ME
Sbjct: 140 ATEDDIRGQLQSHGVQA-REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 189
>BC004181-1|AAH04181.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 290 ATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
AT+ DI + GV ++V+ N+++GQS+GF + Q ME
Sbjct: 140 ATEDDIRGQLQSHGVQA-REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 189
>BC000681-1|AAH00681.1| 541|Homo sapiens RBM10 protein protein.
Length = 541
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 290 ATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
AT+ DI + GV ++V+ N+++GQS+GF + Q ME
Sbjct: 12 ATEDDIRGQLQSHGVQA-REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 61
>AL833874-1|CAD38731.1| 366|Homo sapiens hypothetical protein
protein.
Length = 366
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 101 NVDLYDDVISAPASKPEDG-DGPPIIAPNQHPPEETNGNASYHGPVH 238
++DL D+ +S P DG D + +HPPE+TNG H P H
Sbjct: 148 SIDLNWDLKPTSSSNPMDGMDNRTVGGSMRHPPEQTNG---VHTPPH 191
>AL513366-5|CAI41701.1| 930|Homo sapiens RNA binding motif protein
10 protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 290 ATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
AT+ DI + GV ++V+ N+++GQS+GF + Q ME
Sbjct: 140 ATEDDIRGQLQSHGVQA-REVRLMRNKSSGQSRGFAFVEFSHLQDATRWME 189
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++++G L+W T +D+ + S G + D + G+S+GF + +SV VM
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVM 134
Query: 440 ERLSXK 457
++ K
Sbjct: 135 DQKEHK 140
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++++G L+W T +D+ + S G + D + G+S+GF + +SV VM
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVM 67
Query: 440 ERLSXK 457
++ K
Sbjct: 68 DQKEHK 73
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +2
Query: 260 QLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
++++G L+W T +D+ + S G + D + G+S+GF + +SV VM
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFG--EVVDCTLKLDPITGRSRGFGFVLFKESESVDKVM 136
Query: 440 ERLSXK 457
++ K
Sbjct: 137 DQKEHK 142
>X79201-1|CAA55792.1| 391|Homo sapiens SYT protein.
Length = 391
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 255 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 284
>X69910-1|CAA49535.2| 602|Homo sapiens P63 protein protein.
Length = 602
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 116 DDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHG 250
DDV P P+ PP P QHP + A HG GH G
Sbjct: 30 DDVAKKPPPAPQQPPPPPAPHPQQHPQQHPQNQA--HGK-GGHRG 71
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVIS 406
F ++VG+L+ T +DI +A + G D + ++ A G+SKG+ +S
Sbjct: 97 FHVFVGDLSPEITTEDIKSAFAPFG--KISDARVVKDMATGKSKGYGFVS 144
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVIS 406
F ++VG+L+ T +DI +A + G D + ++ A G+SKG+ +S
Sbjct: 58 FHVFVGDLSPEITTEDIKSAFAPFG--KISDARVVKDMATGKSKGYGFVS 105
>CR542103-1|CAG46900.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 255 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 284
>CR542088-1|CAG46885.1| 391|Homo sapiens SS18 protein.
Length = 391
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 255 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 284
>BC096224-1|AAH96224.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>BC096223-1|AAH96223.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>BC096222-1|AAH96222.1| 418|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 418
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>BC096221-1|AAH96221.1| 387|Homo sapiens synovial sarcoma
translocation, chromosome 18 protein.
Length = 387
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>BC082972-1|AAH82972.1| 602|Homo sapiens cytoskeleton-associated
protein 4 protein.
Length = 602
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 116 DDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHG 250
DDV P P+ PP P QHP + A HG GH G
Sbjct: 30 DDVAKKPPPAPQQPPPPPAPHPQQHPQQHPQNQA--HGK-GGHRG 71
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 31.5 bits (68), Expect = 2.7
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVIS 406
F ++VG+L+ T +DI +A + G D + ++ A G+SKG+ +S
Sbjct: 97 FHVFVGDLSPEITTEDIKSAFAPFG--KISDARVVKDMATGKSKGYGFVS 144
>AK223563-1|BAD97283.1| 602|Homo sapiens cytoskeleton-associated
protein 4 variant protein.
Length = 602
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 116 DDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHG 250
DDV P P+ PP P QHP + A HG GH G
Sbjct: 30 DDVAKKPPPAPQQPPPPPAPHPQQHPQQHPRNQA--HGK-GGHRG 71
>AF343880-1|AAK21314.1| 422|Homo sapiens SYT variant 1 protein.
Length = 422
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 255 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 284
>AF257501-1|AAG31035.1| 369|Homo sapiens SYT/SSX4v fusion protein
protein.
Length = 369
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 227 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 256
>AF257500-1|AAG31034.1| 492|Homo sapiens SYT/SSX4 fusion protein
protein.
Length = 492
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 255 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 284
>AF244972-1|AAM00188.1| 414|Homo sapiens SYT protein protein.
Length = 414
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 255 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 284
>AF230662-1|AAF79937.1| 492|Homo sapiens unknown protein.
Length = 492
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 255 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 284
>AB300357-1|BAF56184.1| 457|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 457
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>AB300356-1|BAF56183.1| 488|Homo sapiens fusion protein SYT-SSX2
protein.
Length = 488
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>AB300355-1|BAF56182.1| 457|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 457
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>AB300354-1|BAF56181.1| 488|Homo sapiens fusion protein SYT-SSX1
protein.
Length = 488
Score = 31.5 bits (68), Expect = 2.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYHGPVHGHHGR 253
PP P Q PP++ +G Y+G + H G+
Sbjct: 251 PPYRPPQQGPPQQYSGQEDYYGDQYSHGGQ 280
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/70 (24%), Positives = 38/70 (54%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
L+V + AT++DI + ++ G + +++ +R G KG+ ++ + + + VME
Sbjct: 75 LFVTGVHEEATEEDIHDKFAEYG--EIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAVME 132
Query: 443 RLSXKXIHGQ 472
L+ + + GQ
Sbjct: 133 GLNGQDLMGQ 142
>EF011619-1|ABK41109.1| 478|Homo sapiens CDW9/WDR51B protein.
Length = 478
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
V++F D F N + G C+ S GSDQ+V++ R++ H Q
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 225
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVG--SVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 76 NLNGREFSGR 85
>BC026080-1|AAH26080.1| 478|Homo sapiens WD repeat domain 51B
protein.
Length = 478
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
V++F D F N + G C+ S GSDQ+V++ R++ H Q
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 225
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 30.3 bits (65), Expect = 6.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVG--SVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 76 NLNGREFSGR 85
>AK074772-1|BAC11198.1| 478|Homo sapiens protein ( Homo sapiens
cDNA FLJ90291 fis, clone NT2RP1001031, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 478
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
V++F D F N + G C+ S GSDQ+V++ R++ H Q
Sbjct: 179 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 225
>AB053276-1|BAB69430.1| 348|Homo sapiens TUWD12 protein.
Length = 348
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
V++F D F N + G C+ S GSDQ+V++ R++ H Q
Sbjct: 49 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 95
>AB053266-1|BAB69057.1| 348|Homo sapiens TUWD12 protein.
Length = 348
Score = 30.3 bits (65), Expect = 6.2
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 332 VSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQ 472
V++F D F N + G C+ S GSDQ+V++ R++ H Q
Sbjct: 49 VNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQ 95
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVG--PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 76 NLNGREFSGR 85
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVG--PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 76 NLNGREFSGR 85
>X76534-1|CAA54044.1| 560|Homo sapiens NMB protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVG--PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 76 NLNGREFSGR 85
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVG--PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 76 NLNGREFSGR 85
>BT007074-1|AAP35737.1| 206|Homo sapiens glycoprotein
(transmembrane) nmb protein.
Length = 206
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 17 VFVGNIPYEATEEQLKDIFSEVG--PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 74
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 75 NLNGREFSGR 84
>BC032783-1|AAH32783.1| 572|Homo sapiens glycoprotein
(transmembrane) nmb protein.
Length = 572
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/70 (21%), Positives = 33/70 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + + S+VG + +R G+ KG+ ++ M
Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVG--PVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ + G+
Sbjct: 76 NLNGREFSGR 85
>BC011595-1|AAH11595.1| 206|Homo sapiens GPNMB protein protein.
Length = 206
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>AY359124-1|AAQ89481.1| 572|Homo sapiens NMB protein.
Length = 572
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>AJ505015-1|CAD43718.1| 206|Homo sapiens glycoprotein nmb-like
protein protein.
Length = 206
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>AF322909-1|AAG42839.1| 560|Homo sapiens transmembrane glycoprotein
HGFIN protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>AC005082-2|AAP22337.1| 206|Homo sapiens unknown protein.
Length = 206
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
>AC005082-1|AAP22336.1| 560|Homo sapiens unknown protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +2
Query: 197 EETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
E+ NGN Y G YV N T W+ D D N + F D K F +
Sbjct: 108 EDANGNIVYEKNCRNEAGLSADPYVYNWTAWSEDSDGENGTGQSHHNVFPDGKPFPHHPG 167
Query: 377 GQSKGFCVI 403
+ F +
Sbjct: 168 WRRWNFIYV 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,274,852
Number of Sequences: 237096
Number of extensions: 2061008
Number of successful extensions: 5705
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 5279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5685
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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