Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M13
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p pro... 173 2e-43
AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA... 173 2e-43
X62638-1|CAA44504.1| 345|Drosophila melanogaster hrp40.2 protein. 38 0.012
X62637-1|CAA44503.1| 321|Drosophila melanogaster hrp40.1 protein. 38 0.012
S62100-1|AAB26989.1| 308|Drosophila melanogaster SqdB protein. 38 0.012
S61875-1|AAB26988.1| 321|Drosophila melanogaster SqdA protein. 38 0.012
BT023832-1|AAZ86753.1| 308|Drosophila melanogaster LD29474p pro... 38 0.012
AY118501-1|AAM49870.1| 321|Drosophila melanogaster LD09691p pro... 38 0.012
AE014297-1708|AAF54964.2| 321|Drosophila melanogaster CG16901-P... 38 0.012
AE014297-1706|AAF54963.2| 344|Drosophila melanogaster CG16901-P... 38 0.012
AE014297-1705|AAN13570.1| 308|Drosophila melanogaster CG16901-P... 38 0.012
X62639-1|CAA44505.1| 385|Drosophila melanogaster hrp48.1 protein. 35 0.083
DQ062784-1|AAY56657.1| 421|Drosophila melanogaster heterogeneou... 35 0.083
AY128430-1|AAM75023.1| 421|Drosophila melanogaster GH26816p pro... 35 0.083
AY069699-1|AAL39844.1| 421|Drosophila melanogaster LD46853p pro... 35 0.083
AE014134-1193|AAN10605.1| 421|Drosophila melanogaster CG10377-P... 35 0.083
AE014134-1192|AAF52457.1| 421|Drosophila melanogaster CG10377-P... 35 0.083
AE014134-1191|AAF52456.1| 421|Drosophila melanogaster CG10377-P... 35 0.083
BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p pro... 32 0.78
AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage sti... 32 0.78
AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA... 32 0.78
L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding pr... 31 1.4
AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p pro... 31 1.4
AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p pro... 31 1.4
AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-bind... 31 1.4
AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,... 31 1.4
AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,... 31 1.4
BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p pro... 30 2.4
AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein... 30 2.4
AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB... 30 2.4
AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA... 30 2.4
U06456-1|AAB19244.1| 196|Drosophila melanogaster transcription ... 29 4.1
AY061435-1|AAL28983.1| 196|Drosophila melanogaster LD36256p pro... 29 4.1
AE014297-1355|AAF54679.1| 196|Drosophila melanogaster CG17358-P... 29 4.1
AE014297-1354|AAF54678.1| 196|Drosophila melanogaster CG17358-P... 29 4.1
AE014297-1353|AAF54677.1| 196|Drosophila melanogaster CG17358-P... 29 4.1
AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA... 29 4.1
AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB... 29 4.1
AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC... 29 4.1
AE014297-504|AAS65118.1| 772|Drosophila melanogaster CG31481-PD... 29 4.1
AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain... 29 4.1
AE014134-3163|AAF53845.1| 154|Drosophila melanogaster CG10466-P... 29 7.2
AY052084-1|AAK93508.1| 643|Drosophila melanogaster SD03629p pro... 28 9.6
AE014297-383|AAN14330.1| 604|Drosophila melanogaster CG2017-PD,... 28 9.6
AE014297-382|AAF51936.1| 604|Drosophila melanogaster CG2017-PC,... 28 9.6
AE014297-381|AAF51934.1| 604|Drosophila melanogaster CG2017-PB,... 28 9.6
AE014297-380|AAF51935.2| 643|Drosophila melanogaster CG2017-PA,... 28 9.6
>AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p
protein.
Length = 652
Score = 173 bits (420), Expect = 2e-43
Identities = 93/175 (53%), Positives = 112/175 (64%), Gaps = 14/175 (8%)
Frame = +2
Query: 56 DIXSDF--NRQDEFAGENVDLYDDV--ISAPASKPEDGDGPP----IIAPNQHPPEETNG 211
D+ DF QDEF G+ VDLYDD+ + A+ G G P P P E N
Sbjct: 12 DLDKDFAGQAQDEFGGDGVDLYDDIGGPTESAASGGGGGGTPSADGAAGPGSGEPGERNS 71
Query: 212 ---NASYH---GPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRA 373
N YH G + RR+QLYVGNLTWW TDQDIAN++ D+GVSD Q+VKFFENRA
Sbjct: 72 GGPNGVYHQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRA 131
Query: 374 NGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTR 538
NGQSKGF VISLGS+ S+R V+++L K +HGQ P +T P+KQAL FES KTR
Sbjct: 132 NGQSKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFESLQKTR 186
>AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA
protein.
Length = 652
Score = 173 bits (420), Expect = 2e-43
Identities = 93/175 (53%), Positives = 112/175 (64%), Gaps = 14/175 (8%)
Frame = +2
Query: 56 DIXSDF--NRQDEFAGENVDLYDDV--ISAPASKPEDGDGPP----IIAPNQHPPEETNG 211
D+ DF QDEF G+ VDLYDD+ + A+ G G P P P E N
Sbjct: 12 DLDKDFAGQAQDEFGGDGVDLYDDIGGPTESAASGGGGGGTPSADGAAGPGSGEPGERNS 71
Query: 212 ---NASYH---GPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRA 373
N YH G + RR+QLYVGNLTWW TDQDIAN++ D+GVSD Q+VKFFENRA
Sbjct: 72 GGPNGVYHQSSGSLTPTMNRRYQLYVGNLTWWTTDQDIANSLRDIGVSDLQEVKFFENRA 131
Query: 374 NGQSKGFCVISLGSDQSVRMVMERLSXKXIHGQHPXLTLPTKQALNXFESQSKTR 538
NGQSKGF VISLGS+ S+R V+++L K +HGQ P +T P+KQAL FES KTR
Sbjct: 132 NGQSKGFSVISLGSESSLRAVLDQLPKKEMHGQAPVVTYPSKQALTQFESLQKTR 186
>X62638-1|CAA44504.1| 345|Drosophila melanogaster hrp40.2 protein.
Length = 345
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>X62637-1|CAA44503.1| 321|Drosophila melanogaster hrp40.1 protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>S62100-1|AAB26989.1| 308|Drosophila melanogaster SqdB protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPLDKQKSQRKGFCFITFDSEQVV 190
>S61875-1|AAB26988.1| 321|Drosophila melanogaster SqdA protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPLDKQKSQRKGFCFITFDSEQVV 190
>BT023832-1|AAZ86753.1| 308|Drosophila melanogaster LD29474p
protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>AY118501-1|AAM49870.1| 321|Drosophila melanogaster LD09691p
protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>AE014297-1708|AAF54964.2| 321|Drosophila melanogaster CG16901-PA,
isoform A protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>AE014297-1706|AAF54963.2| 344|Drosophila melanogaster CG16901-PB,
isoform B protein.
Length = 344
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>AE014297-1705|AAN13570.1| 308|Drosophila melanogaster CG16901-PC,
isoform C protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.012
Identities = 23/113 (20%), Positives = 48/113 (42%)
Frame = +2
Query: 98 ENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGN 277
EN + ++ +K DGP + TNG++ G +L+VG
Sbjct: 3 ENKQVDTEINGEDFTKDVTADGPGSENGDAGAAGSTNGSSDNQSAASGQRDDDRKLFVGG 62
Query: 278 LTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
L+W T++++ + G + + + + G+S+GF I + +++ V
Sbjct: 63 LSWETTEKELRDHFGKYG--EIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 33.1 bits (72), Expect = 0.34
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 251 RRFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
R +++VG LT +D++I G + +V+ ++ Q KGFC I+ S+Q V
Sbjct: 134 RHGKIFVGGLTTEISDEEIKTYFGQFG--NIVEVEMPFDKQKSQRKGFCFITFDSEQVV 190
>X62639-1|CAA44505.1| 385|Drosophila melanogaster hrp48.1 protein.
Length = 385
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>DQ062784-1|AAY56657.1| 421|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 421
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>AY128430-1|AAM75023.1| 421|Drosophila melanogaster GH26816p
protein.
Length = 421
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>AY069699-1|AAL39844.1| 421|Drosophila melanogaster LD46853p
protein.
Length = 421
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>AE014134-1193|AAN10605.1| 421|Drosophila melanogaster CG10377-PC,
isoform C protein.
Length = 421
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>AE014134-1192|AAF52457.1| 421|Drosophila melanogaster CG10377-PB,
isoform B protein.
Length = 421
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>AE014134-1191|AAF52456.1| 421|Drosophila melanogaster CG10377-PA,
isoform A protein.
Length = 421
Score = 35.1 bits (77), Expect = 0.083
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 254 RFQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRM 433
R +L+VG L+W T ++++ G D D +N +G+S+GF ++ +V
Sbjct: 6 RGKLFVGGLSWETTQENLSRYFCRFG--DIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 434 VME 442
V++
Sbjct: 64 VLQ 66
>BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p
protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + S+VG +K +R +G+ KGF ++ M
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVG--PVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ I G+
Sbjct: 76 NLNGYEIGGR 85
>AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage
stimulation factor 64kilodalton subunit protein.
Length = 419
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + S+VG +K +R +G+ KGF ++ M
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVG--PVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ I G+
Sbjct: 76 NLNGYEIGGR 85
>AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA
protein.
Length = 419
Score = 31.9 bits (69), Expect = 0.78
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++VGN+ + AT++ + S+VG +K +R +G+ KGF ++ M
Sbjct: 18 VFVGNIPYEATEEKLKEIFSEVG--PVLSLKLVFDRESGKPKGFGFCEYKDQETALSAMR 75
Query: 443 RLSXKXIHGQ 472
L+ I G+
Sbjct: 76 NLNGYEIGGR 85
>L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding
protein protein.
Length = 224
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+YVGN+ + A+ +++ G V N+A+G KGF I GS + V +
Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGT--INRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p
protein.
Length = 224
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+YVGN+ + A+ +++ G V N+A+G KGF I GS + V +
Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGT--INRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p
protein.
Length = 224
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+YVGN+ + A+ +++ G V N+A+G KGF I GS + V +
Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGT--INRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-binding
protein II protein.
Length = 224
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+YVGN+ + A+ +++ G V N+A+G KGF I GS + V +
Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGT--INRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,
isoform B protein.
Length = 224
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+YVGN+ + A+ +++ G V N+A+G KGF I GS + V +
Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGT--INRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,
isoform A protein.
Length = 224
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVM 439
+YVGN+ + A+ +++ G V N+A+G KGF I GS + V +
Sbjct: 98 VYVGNVDYGASAEELEAHFHGCGT--INRVTILCNKADGHPKGFAYIEFGSKEFVETAL 154
>BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p
protein.
Length = 504
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 92 AGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEET--NGNASYHGPVHGHH 247
+G +VD YD + P ++A Q + N NAS G H HH
Sbjct: 184 SGNSVDQYDQPQQQQHQPQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHSHH 237
>AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein
protein.
Length = 660
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 92 AGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEET--NGNASYHGPVHGHH 247
+G +VD YD + P ++A Q + N NAS G H HH
Sbjct: 340 SGNSVDQYDQPQQQQHQPQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHSHH 393
>AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB,
isoform B protein.
Length = 657
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 92 AGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEET--NGNASYHGPVHGHH 247
+G +VD YD + P ++A Q + N NAS G H HH
Sbjct: 337 SGNSVDQYDQPQQQQHQPQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHSHH 390
>AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA,
isoform A protein.
Length = 504
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +2
Query: 92 AGENVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEET--NGNASYHGPVHGHH 247
+G +VD YD + P ++A Q + N NAS G H HH
Sbjct: 184 SGNSVDQYDQPQQQQHQPQQQSTNPTLVAAQQQQSHHSLLNNNASNGGISHSHH 237
>U06456-1|AAB19244.1| 196|Drosophila melanogaster transcription
initiation factorTFIID 28 kDa subunit protein.
Length = 196
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYH--GPVHG 241
PP+ +P+QH P N N+S GPV G
Sbjct: 35 PPMASPSQHSPMTNNSNSSSQNGGPVSG 62
>AY061435-1|AAL28983.1| 196|Drosophila melanogaster LD36256p
protein.
Length = 196
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYH--GPVHG 241
PP+ +P+QH P N N+S GPV G
Sbjct: 35 PPMASPSQHSPMTNNSNSSSQNGGPVSG 62
>AE014297-1355|AAF54679.1| 196|Drosophila melanogaster CG17358-PC,
isoform C protein.
Length = 196
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYH--GPVHG 241
PP+ +P+QH P N N+S GPV G
Sbjct: 35 PPMASPSQHSPMTNNSNSSSQNGGPVSG 62
>AE014297-1354|AAF54678.1| 196|Drosophila melanogaster CG17358-PB,
isoform B protein.
Length = 196
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYH--GPVHG 241
PP+ +P+QH P N N+S GPV G
Sbjct: 35 PPMASPSQHSPMTNNSNSSSQNGGPVSG 62
>AE014297-1353|AAF54677.1| 196|Drosophila melanogaster CG17358-PA,
isoform A protein.
Length = 196
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 164 PPIIAPNQHPPEETNGNASYH--GPVHG 241
PP+ +P+QH P N N+S GPV G
Sbjct: 35 PPMASPSQHSPMTNNSNSSSQNGGPVSG 62
>AE014297-507|AAF54089.3| 782|Drosophila melanogaster CG31481-PA,
isoform A protein.
Length = 782
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 149 EDGDGPPIIAPNQHP--PEETNGNASYHGPVHGHH 247
E G PPI A + H P A H P+H HH
Sbjct: 672 EAGQQPPIPATHGHGHHPHHVQVPAQAHAPIHAHH 706
>AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB,
isoform B protein.
Length = 777
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 149 EDGDGPPIIAPNQHP--PEETNGNASYHGPVHGHH 247
E G PPI A + H P A H P+H HH
Sbjct: 667 EAGQQPPIPATHGHGHHPHHVQVPAQAHAPIHAHH 701
>AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC,
isoform C protein.
Length = 777
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 149 EDGDGPPIIAPNQHP--PEETNGNASYHGPVHGHH 247
E G PPI A + H P A H P+H HH
Sbjct: 667 EAGQQPPIPATHGHGHHPHHVQVPAQAHAPIHAHH 701
>AE014297-504|AAS65118.1| 772|Drosophila melanogaster CG31481-PD,
isoform D protein.
Length = 772
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 149 EDGDGPPIIAPNQHP--PEETNGNASYHGPVHGHH 247
E G PPI A + H P A H P+H HH
Sbjct: 662 EAGQQPPIPATHGHGHHPHHVQVPAQAHAPIHAHH 696
>AE001572-12|AAD19802.1| 782|Drosophila melanogaster homeodomain
protein protein.
Length = 782
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +2
Query: 149 EDGDGPPIIAPNQHP--PEETNGNASYHGPVHGHH 247
E G PPI A + H P A H P+H HH
Sbjct: 672 EAGQQPPIPATHGHGHHPHHVQVPAQAHAPIHAHH 706
>AE014134-3163|AAF53845.1| 154|Drosophila melanogaster CG10466-PA
protein.
Length = 154
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/63 (20%), Positives = 29/63 (46%)
Frame = +2
Query: 263 LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVME 442
++V + T+ D+ S G + ++ + G+SKGFC + +S + ++
Sbjct: 36 IFVAGFPYTLTEGDLVCVFSQYG--EVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVD 93
Query: 443 RLS 451
L+
Sbjct: 94 NLN 96
>AY052084-1|AAK93508.1| 643|Drosophila melanogaster SD03629p
protein.
Length = 643
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 191 PPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSD 340
PPE GN Y + +RF+ V + W + + AI ++GVSD
Sbjct: 107 PPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRLREGN-GEAIYEIGVSD 155
>AE014297-383|AAN14330.1| 604|Drosophila melanogaster CG2017-PD,
isoform D protein.
Length = 604
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 191 PPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSD 340
PPE GN Y + +RF+ V + W + + AI ++GVSD
Sbjct: 68 PPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRLREGN-GEAIYEIGVSD 116
>AE014297-382|AAF51936.1| 604|Drosophila melanogaster CG2017-PC,
isoform C protein.
Length = 604
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 191 PPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSD 340
PPE GN Y + +RF+ V + W + + AI ++GVSD
Sbjct: 68 PPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRLREGN-GEAIYEIGVSD 116
>AE014297-381|AAF51934.1| 604|Drosophila melanogaster CG2017-PB,
isoform B protein.
Length = 604
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 191 PPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSD 340
PPE GN Y + +RF+ V + W + + AI ++GVSD
Sbjct: 68 PPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRLREGN-GEAIYEIGVSD 116
>AE014297-380|AAF51935.2| 643|Drosophila melanogaster CG2017-PA,
isoform A protein.
Length = 643
Score = 28.3 bits (60), Expect = 9.6
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +2
Query: 191 PPEETNGNASYHGPVHGHHGRRFQLYVGNLTWWATDQDIANAISDVGVSD 340
PPE GN Y + +RF+ V + W + + AI ++GVSD
Sbjct: 107 PPEPQLGNVEYKLKLVNPSKQRFEHLVTQMKWRLREGN-GEAIYEIGVSD 155
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,722,000
Number of Sequences: 53049
Number of extensions: 652869
Number of successful extensions: 2334
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 2127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2326
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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