Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M13
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 33 0.18
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 33 0.18
AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin f... 32 0.41
AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin f... 32 0.41
Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 29 3.8
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 28 5.0
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 28 5.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 27 8.7
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 8.7
AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 96.3 bits (229), Expect = 2e-20
Identities = 59/149 (39%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Frame = +2
Query: 107 DLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYHGPVHGHHGRRFQLYVGNLTW 286
DLYD+ I AP + E P+ T G + P GR++ YVGNL W
Sbjct: 39 DLYDEAI-APTNSTESAK--PVSPTITTVTAPTAGIGAK--PATSSEGRKYCCYVGNLLW 93
Query: 287 WATDQDIANAISDVGV--SDFQDVKFFENRANGQSKGFCVISLGSDQSVRMVMERLSXKX 460
+ TD D+ A+ G+ S F D+KFFENR NGQSKG+ ++ L SD +V+ ME L K
Sbjct: 94 YTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTMEILPTKT 153
Query: 461 IHGQHPXLTL--PTKQA-LNXFESQSKTR 538
IHGQ P + T QA L +++++TR
Sbjct: 154 IHGQSPTVLSYNKTNQAKLEDAQAKNQTR 182
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 257 FQLYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSVRMV 436
F +YVGN+ + T+++I N + VG +V+ +R G+ +GF + + +
Sbjct: 6 FSVYVGNVPYQGTEEEIGNYFAAVG--HVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRA 63
Query: 437 MERLSXKXIHGQH 475
+E+L+ +G++
Sbjct: 64 VEQLNGVAFNGRN 76
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 206 NGNASYHGPVHGHHGRRFQ---LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
NGNAS +GH + + ++VG ++ ++D+++ + G VK+ +R N
Sbjct: 9 NGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY--DRTN 66
Query: 377 GQSKGFCVISLGSDQSVRMVM 439
G+S+GF + + + ++ +
Sbjct: 67 GRSRGFAFVEFTTGEGCKLAL 87
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Frame = +2
Query: 206 NGNASYHGPVHGHHGRRFQ---LYVGNLTWWATDQDIANAISDVGVSDFQDVKFFENRAN 376
NGNAS +GH + + ++VG ++ ++D+++ + G VK+ +R N
Sbjct: 9 NGNASETIKENGHSTKGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY--DRTN 66
Query: 377 GQSKGFCVISLGSDQSVRMVM 439
G+S+GF + + + ++ +
Sbjct: 67 GRSRGFAFVEFTTGEGCKLAL 87
>AF039043-9|AAB94196.1| 427|Caenorhabditis elegans Tetraspanin
family protein 14,isoform a protein.
Length = 427
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 68 DFNRQDEFAGENVDLYDDV----ISAPASKPEDGDGPPIIAPNQHPPEETNGNAS 220
D NR+D+ ++DL ++ SA A++P D PP + P +H P + + NAS
Sbjct: 311 DHNRRDQL--NSLDLLEEGKFNNASANATRPRPPDIPPPLPPIEHVPRKKSRNAS 363
>AF039043-8|AAL02514.1| 451|Caenorhabditis elegans Tetraspanin
family protein 14,isoform b protein.
Length = 451
Score = 31.9 bits (69), Expect = 0.41
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 68 DFNRQDEFAGENVDLYDDV----ISAPASKPEDGDGPPIIAPNQHPPEETNGNAS 220
D NR+D+ ++DL ++ SA A++P D PP + P +H P + + NAS
Sbjct: 335 DHNRRDQL--NSLDLLEEGKFNNASANATRPRPPDIPPPLPPIEHVPRKKSRNAS 387
>Z68342-3|CAA92773.1| 751|Caenorhabditis elegans Hypothetical
protein F38E11.4 protein.
Length = 751
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 44 CTPTDIXSDFNRQDEFAGENVDLYDDVISAPAS-KP--EDGDGPPIIAPNQHPPEETNGN 214
C +DI S F+R +EF N Y D I PA KP + PP + N EET
Sbjct: 362 CQLSDI-SQFSRPNEFVVANFTDYFDKICDPADPKPMLTTPETPPELIQNSVDEEETTSE 420
Query: 215 AS 220
S
Sbjct: 421 RS 422
>Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical
protein F33H1.3 protein.
Length = 359
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 50 PTDIXSDFNRQDEFAGE-NVDLYDDVISAPASKPEDGDGPPIIAPNQHPPEETNGNASYH 226
P + +F+ +E E + D YDD+ AP PE + I N PP N +
Sbjct: 186 PCGLAPNFSDSEEEEEEVHDDHYDDIDLAPVPIPEFDNPYQPIHRNYGPPSSYNSMPT-R 244
Query: 227 GPVHGHH 247
P H HH
Sbjct: 245 MPHHHHH 251
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +2
Query: 143 KPEDGDGPPIIAPNQHPP-EETNGNASYHGP-VHGH 244
+P PP+ A Q PP E+NG+ H HGH
Sbjct: 277 QPPTSYAPPVAATQQQPPVSESNGHGHSHADGGHGH 312
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 359 RTSHLENRRHRHPRSRSQYLGPLPTMLG 276
RTS+ NRR H RS+ +Y+ P+ +++G
Sbjct: 918 RTSYNSNRRPSHSRSQDEYV-PIDSVIG 944
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 359 RTSHLENRRHRHPRSRSQYLGPLPTMLG 276
RTS+ NRR H RS+ +Y+ P+ +++G
Sbjct: 918 RTSYNSNRRPSHSRSQDEYV-PIDSVIG 944
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 176 APNQHPPEETNGNASYHGPV-HGHHG 250
AP H E++G+ +H P HGHHG
Sbjct: 435 APAHHGHHESHGHG-HHSPAHHGHHG 459
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 299 QDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
+D+ S VG +DV+ + G+SKG C + ++SV
Sbjct: 39 RDLEEFFSAVGA--VRDVRIITDSRTGRSKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 299 QDIANAISDVGVSDFQDVKFFENRANGQSKGFCVISLGSDQSV 427
+D+ S VG +DV+ + G+SKG C + ++SV
Sbjct: 184 RDLEEFFSAVGA--VRDVRIITDSRTGRSKGICYVEFWDEESV 224
>AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical
protein Y19D10B.4 protein.
Length = 881
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +3
Query: 225 TARFTDIMAAVFNFTSAT*HGGQRTKILRTRSRMSVSPIFKM*SSLRTEPMVSPKD 392
T R + V FT+AT T+I+ RS PIF ++L+T + P D
Sbjct: 716 TVRQKTSVGLVLGFTAATNDDNASTQIISQRSSSDSQPIF---TTLKTTNHIVPTD 768
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,212,042
Number of Sequences: 27780
Number of extensions: 305621
Number of successful extensions: 979
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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