Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_M11
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   3.8  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   3.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.7  

>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 113 RLVSWTDSFNSNTHYLQ 63
           R+  WTD +NSN  + Q
Sbjct: 499 RMKFWTDIYNSNPLFTQ 515


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 113 RLVSWTDSFNSNTHYLQ 63
           R+  WTD +NSN  + Q
Sbjct: 501 RMKFWTDIYNSNPLFTQ 517


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 349 LPTLHLFSMXNFY 387
           LPTL LF++  FY
Sbjct: 161 LPTLKLFALHEFY 173


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 489 ITYSH*RVYTNIMCIYXGNIYILMLSXRISYYMWXIXLW 605
           + Y H R+Y   + I     YI+++S   + Y   I L+
Sbjct: 144 LRYEHYRLYQLSVLIDNNMSYIIIVSFATNLYFIIIQLF 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,243
Number of Sequences: 336
Number of extensions: 3229
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)