Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M11
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0) 105 3e-23
SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 9e-15
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 39 0.003
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 38 0.009
SB_6446| Best HMM Match : DENN (HMM E-Value=2.2) 34 0.087
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_16362| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5) 28 7.5
SB_10820| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0) 28 7.5
>SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0)
Length = 266
Score = 105 bits (252), Expect = 3e-23
Identities = 50/118 (42%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Frame = +3
Query: 84 VETISPGDESTYPKS-GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEG 260
+E +S ++ T G T+ +HYTG L NG KFDSS DRGK F F +GK VI+GW++G
Sbjct: 29 IEVVSKPEKCTRKTHVGDTLSMHYTGRLANGNKFDSSLDRGKTFDFTLGKGMVIQGWEQG 88
Query: 261 VAKMSVXERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVXLLRLE*IQFVTKNYYNII 434
+ M + E+ KLT P AYG+ G IPP++TL DV L+ ++ + N + +I
Sbjct: 89 LLDMCIGEKRKLTIPPHLAYGENGAGAAIPPHATLYMDVELVEIQGSKESDPNVFGMI 146
>SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 77.4 bits (182), Expect = 9e-15
Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Frame = +3
Query: 87 ETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGK---PFKFRIGKSEVIRGWDE 257
ET P D K G VVVHYTG + +G FD++RD K PF+F IG VI+G+++
Sbjct: 104 ETFVPSDCENKTKVGDHVVVHYTGWMQDGSLFDTTRDHRKGYQPFEFTIGGGTVIKGFEQ 163
Query: 258 GVAKMSVXERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVXLLRLE 395
GV M V ++ K+ P AYG++G G +P N L LE
Sbjct: 164 GVTGMCVGQKRKIVIPPALAYGKKG-SGDVPGNLDLTNTTLTYNLE 208
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +3
Query: 75 GVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGK 230
GV +S G + G TVVV Y G NG++FDS+ G PF+F +G+
Sbjct: 873 GVRKRILSEGHGAEMANVGCTVVVRYVGKFLNGEEFDSNTG-GVPFEFVLGE 923
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 123 KSGQTVVVHYTGTLTN----GKKFDSSRDRGKPFKFRIGKSEVIRG 248
++G V V YTG L GK FDS+ K FKF+ GK +VI+G
Sbjct: 120 ETGDAVEVKYTGWLLENGNFGKVFDSNAGTDKTFKFKTGKGKVIKG 165
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 132 QTVVVHYTGTL---TNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVXERAKLTC 302
Q V H+ L + ++ D SR G+PF+ +GK + W+E + M V E A+ TC
Sbjct: 93 QLAVFHFKTFLMEQSEKQELDCSRKIGQPFELLMGKKFKLEIWEELIKTMRVKEVARFTC 152
Query: 303 SPDYAYG 323
G
Sbjct: 153 DKSVVAG 159
>SB_6446| Best HMM Match : DENN (HMM E-Value=2.2)
Length = 492
Score = 34.3 bits (75), Expect = 0.087
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 267 KMSVXERAKLTCSPDYA----YGQQGHPGVIPPNSTLIFDVXLLRLE*IQFVTKNYYNII 434
++ R +CSP A + Q+G ++ PNST +F + L R + QF +I
Sbjct: 268 RLLAVNRRLFSCSPHVAAIFDFYQRGSLVILNPNSTAVFQIALYRKKIAQFAFAT-SKVI 326
Query: 435 VMSIAL*NSKSQLITLFFITYSH 503
S+ L + L+ + TY+H
Sbjct: 327 ETSLHLRTHPTTLMLAPYYTYAH 349
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = +2
Query: 365 YFRCXTSTSRINTICNQKLLQHHCYVNCPLKL*VTAYHIIFYHILSLKSLYQHYVYLXWK 544
Y+R + + ++++ + ++H Y+ PL++ V+ YH L + S Y Y+ + +
Sbjct: 3573 YYRASLACNPVSSVYYRASSEYHRYIIVPLRI-VSEYHRYIIVPLRIVSEYHRYIIVPLR 3631
Query: 545 YIYTY 559
+ Y
Sbjct: 3632 IVSEY 3636
>SB_16362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 488 YHILSLKSLYQHYVYLXWKYIYTYAIRKNFILYVVN 595
+HI+ L +H+ W ++Y Y R++F + +N
Sbjct: 100 FHIIDLNQTIKHFRVRLWYFVYLYGNREHFHIIGLN 135
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +2
Query: 488 YHILSLKSLYQHYVYLXWKYIYTYAIRKNF 577
+HI+ L +H+ W ++Y Y R++F
Sbjct: 129 FHIIGLNQTIKHFRVRLWYFVYLYGNREHF 158
>SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 321 RKHSQESRLIWHAHXQTSLPHPH 253
RK+SQ + +IW+ H Q H H
Sbjct: 109 RKNSQRNNIIWYNHFQQEHKHQH 131
>SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5)
Length = 398
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 274 DIFATPSSQPRITSDFPILNLKGLPRSRDESNFLP 170
D+ +T SQP+I S + G+PR R SN P
Sbjct: 214 DVSSTKRSQPKIGSSALLPKSFGVPRDRSPSNEKP 248
>SB_10820| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0)
Length = 922
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 111 STYPKSGQTVVVHYTGTLTNGKKFD 185
+ YPKSGQT + + NG +FD
Sbjct: 36 TAYPKSGQTWTIEIVKQVLNGGEFD 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,934,129
Number of Sequences: 59808
Number of extensions: 377498
Number of successful extensions: 867
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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