Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_M09
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54216-5|CAA90946.1|   95|Caenorhabditis elegans Hypothetical pr...    61   8e-10
Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006627-7|AAK85463.1|  218|Caenorhabditis elegans Hypothetical ...    28   6.6  
U80837-3|AAB37904.2|  384|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z54216-5|CAA90946.1|   95|Caenorhabditis elegans Hypothetical
           protein T24H10.6 protein.
          Length = 95

 Score = 60.9 bits (141), Expect = 8e-10
 Identities = 24/54 (44%), Positives = 43/54 (79%)
 Frame = +3

Query: 195 YAGLIGQLTEKARNVVREMDSTNELTFLRVRSRXHEILIAPDREFILIVIQNTS 356
           +   + QL EK +  +RE+DS+N+LTFLR+R++ +EI+IAPD++ +++VI++ S
Sbjct: 42  HTAFLQQLCEKTKTSIRELDSSNDLTFLRLRTKKNEIMIAPDKDHVIMVIKDLS 95



 Score = 34.7 bits (76), Expect = 0.058
 Identities = 12/26 (46%), Positives = 22/26 (84%)
 Frame = +1

Query: 73  TEVEETIKRIQAHKGVMGVVIVNHEG 150
           ++ EETI+R+Q+ KGV+G+++V+  G
Sbjct: 2   SDFEETIRRLQSEKGVVGIIVVDSAG 27


>Z69302-8|CAA93261.3|  420|Caenorhabditis elegans Hypothetical
           protein F40F8.5 protein.
          Length = 420

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 63  HNGHRGRRNDQEDPSPQRGDGCRHRKPRR 149
           HN HR +RN  +DPS    D   H   RR
Sbjct: 249 HNHHRRKRNHDDDPSDTTIDHTGHNHRRR 277



 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 63  HNGHRGRRNDQEDPSPQRGDGCRHRKPRRYTN 158
           HN HR RR+D  DP+    D   H   RR  N
Sbjct: 227 HN-HRRRRSDDHDPNDPNVDHIGHNHHRRKRN 257



 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +3

Query: 63  HNGHRGRRNDQEDPSPQRGDGCRHRKPRRY 152
           HN HR RR+D  DP+    D   H   RR+
Sbjct: 316 HN-HRRRRSDDHDPNDPNVDHTGHNHKRRH 344


>Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical
           protein K03D7.6 protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = -3

Query: 176 YXMSF*VGIPSWFTMTTPITPLWAWILLIVSSTSVAIMYEPQN 48
           Y M F VG+ SWF +   +  L  W+ +  ++ S   ++E +N
Sbjct: 93  YGMFF-VGVLSWFEVPNGVQLLIVWLSMTFAAASYVYVFESRN 134


>Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical
           protein K01B6.3 protein.
          Length = 410

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 143 WFTMTTPITPLWAWILLIVSSTSVAIMY 60
           W T+  P TP WA ++ I+ ST   I +
Sbjct: 70  WKTLAVPGTPSWALLVCIIESTFALICF 97


>AC006627-7|AAK85463.1|  218|Caenorhabditis elegans Hypothetical
           protein E01A2.6 protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 81  RRNDQEDPSPQRGDGCRHRKPRRY 152
           R ND +D   QRGDGC     + Y
Sbjct: 100 RSNDFDDDGDQRGDGCSSNYSKAY 123


>U80837-3|AAB37904.2|  384|Caenorhabditis elegans Hypothetical
           protein F07E5.5 protein.
          Length = 384

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = +3

Query: 39  KISVLRLIHNGHRGRRNDQEDPSPQRGDGCRHR--KPRRYTNSKAHXIMPLQLLYAGLIG 212
           K+     I    R  R + E  +    +  + +  KP+     K H    ++  Y+ L+G
Sbjct: 64  KLKKAAAIERKERAERGEPEPEATGEPEPKKEKLDKPKHKGKDKNHSFEAIEKKYSALLG 123

Query: 213 QLTEKARN 236
           +LTE   N
Sbjct: 124 KLTETTTN 131


>AL022716-4|CAA18773.1|  703|Caenorhabditis elegans Hypothetical
           protein C24F3.4 protein.
          Length = 703

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 199 LGLLDSLLRRPGMWFVKWT 255
           +GL D  + R   WFVKWT
Sbjct: 119 MGLADDNVYRESRWFVKWT 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,732,152
Number of Sequences: 27780
Number of extensions: 274745
Number of successful extensions: 543
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)