BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_M09 (652 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 4.5 U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 7.8 DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 7.8 DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 7.8 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 7.8 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 7.8 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 7.8 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.8 AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 21 7.8 >DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel protein. Length = 489 Score = 22.2 bits (45), Expect = 4.5 Identities = 9/31 (29%), Positives = 19/31 (61%) Frame = +2 Query: 5 VL*FVYELSVVENFSFEAHT*WPPRSKKRSR 97 V+ FV+ + + ++ +T W R+KK+S+ Sbjct: 309 VMCFVFVFAALLEYAAVNYTYWGARAKKKSK 339 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 21.4 bits (43), Expect = 7.8 Identities = 5/10 (50%), Positives = 8/10 (80%) Frame = +1 Query: 235 MWFVKWTPQM 264 +WF+ WTP + Sbjct: 286 LWFMAWTPYL 295 >DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.4 bits (43), Expect = 7.8 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 421 KTI*NNFNYKLTY 383 KTI NN NYK Y Sbjct: 88 KTIHNNNNYKYNY 100 >DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.4 bits (43), Expect = 7.8 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 421 KTI*NNFNYKLTY 383 KTI NN NYK Y Sbjct: 88 KTIHNNNNYKYNY 100 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.4 bits (43), Expect = 7.8 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 421 KTI*NNFNYKLTY 383 KTI NN NYK Y Sbjct: 88 KTIHNNNNYKYNY 100 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.4 bits (43), Expect = 7.8 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 421 KTI*NNFNYKLTY 383 KTI NN NYK Y Sbjct: 88 KTIHNNNNYKYNY 100 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.4 bits (43), Expect = 7.8 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 421 KTI*NNFNYKLTY 383 KTI NN NYK Y Sbjct: 88 KTIHNNNNYKYNY 100 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 21.4 bits (43), Expect = 7.8 Identities = 9/13 (69%), Positives = 9/13 (69%) Frame = -1 Query: 421 KTI*NNFNYKLTY 383 KTI NN NYK Y Sbjct: 321 KTIHNNNNYKYNY 333 >AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. Length = 76 Score = 21.4 bits (43), Expect = 7.8 Identities = 5/10 (50%), Positives = 8/10 (80%) Frame = +1 Query: 235 MWFVKWTPQM 264 +WF+ WTP + Sbjct: 36 LWFMAWTPYL 45 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 171,338 Number of Sequences: 438 Number of extensions: 3675 Number of successful extensions: 11 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19682733 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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