Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M05
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0126 + 14874739-14875581 79 3e-15
02_05_1070 + 33872845-33873726 78 5e-15
08_02_0807 + 21411799-21412665 76 3e-14
07_01_0499 - 3738959-3740068 52 5e-07
04_04_1644 + 35015849-35016838 46 2e-05
06_01_0276 + 2035763-2036770 44 1e-04
10_01_0149 + 1745355-1746230 42 6e-04
10_01_0124 - 1504521-1505303 42 6e-04
10_08_0041 - 14374684-14377339,14377371-14378233 41 0.001
10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020 34 0.11
06_03_0342 + 19737951-19738772 31 0.60
06_03_0183 + 17642639-17643428,17644507-17644949 31 0.79
10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657 29 3.2
08_02_0757 + 20840885-20841281,20842937-20843025,20843132-208432... 28 5.6
04_04_1216 + 31811403-31812267,31813187-31813877,31813981-318141... 28 7.4
>09_04_0126 + 14874739-14875581
Length = 280
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Frame = +3
Query: 387 LESQFA*XIPXNXTVQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQ 566
LE++FA V + +V MDTEFP VV RP+G +S AD+ Y L+ NVD+L++IQ
Sbjct: 22 LEAEFA---VIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNADFNYATLKANVDMLKLIQ 78
Query: 567 LGLTFMDENGKTPP-----AYTTWQFNFK 638
LGLTF +E+G P WQFNF+
Sbjct: 79 LGLTFSNEHGGLPSLGPEGRPCVWQFNFR 107
>02_05_1070 + 33872845-33873726
Length = 293
Score = 78.2 bits (184), Expect = 5e-15
Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +3
Query: 387 LESQFA*XIPXNXTVQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQ 566
LE +FA V + +V MDTEFP +V RP+G RS ADY Y L+ NVD+L +IQ
Sbjct: 38 LEEEFA---LIRDVVDEFPFVAMDTEFPGIVCRPVGAFRSPADYNYATLKANVDMLHLIQ 94
Query: 567 LGLTFMDENGKTPP-----AYTTWQFNFK 638
LGLTF G+ P WQFNF+
Sbjct: 95 LGLTFSSPRGELPALGPGRRRCVWQFNFR 123
>08_02_0807 + 21411799-21412665
Length = 288
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
V Y +V MDTEFP +V RP+G R+T ++ Y L NV++L++IQLGLT DE G P
Sbjct: 37 VDRYPYVAMDTEFPGIVCRPVGNFRTTDEFNYANLEANVNMLKLIQLGLTLSDEGGDLPR 96
Query: 609 AYT-----TWQFNFK 638
T WQFNF+
Sbjct: 97 RGTGGRRCIWQFNFR 111
>07_01_0499 - 3738959-3740068
Length = 369
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Frame = +3
Query: 453 MDTEFPXVVARPIGEXRS-TADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPPAYT---- 617
+DTEFP V RP + T Y LL+ NVD L ++QLGLT D G+ P T
Sbjct: 121 VDTEFPGTVHRPSAPAYTLTRKQKYALLKKNVDELHLVQLGLTLFDAGGRLPDLGTGGAA 180
Query: 618 --TWQFNFK 638
W+FNF+
Sbjct: 181 RYVWEFNFR 189
>04_04_1644 + 35015849-35016838
Length = 329
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRS-TADYXYQLLRCNVDLLRIIQLGLT 578
+ + +V MDTEFP V+ RP TA Y LLR NVD L +IQ+G+T
Sbjct: 75 IDHFPYVSMDTEFPGVIHRPTKHPALLTAGDRYDLLRRNVDALHLIQVGIT 125
>06_01_0276 + 2035763-2036770
Length = 335
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 438 YHWVXMDTEFPXVVARPIGEXRS--TADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPPA 611
Y V MDTEFP V + R T Y +++ NVD L ++QLGL G+ P A
Sbjct: 94 YPVVSMDTEFPGTV-HDVATPRHLRTPRESYAVVKRNVDELHLLQLGLALSGPAGRCPVA 152
Query: 612 YTTWQFNF 635
WQFNF
Sbjct: 153 ---WQFNF 157
>10_01_0149 + 1745355-1746230
Length = 291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 438 YHWVXMDTEFPXVV-ARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPPAY 614
+ +V +DT+FP VV P G TAD Y +R N D L ++QLG+T +G+ P
Sbjct: 55 FPFVAVDTQFPGVVHPHPRGAG-VTADDRYAAVRANADELCLLQLGITLSAADGRLPVDG 113
Query: 615 TTWQFNFKFN 644
+F + F+
Sbjct: 114 ALVEFMWDFD 123
>10_01_0124 - 1504521-1505303
Length = 260
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 438 YHWVXMDTEFPXVVARP-IGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTP 605
Y +V +D EF VV P R T D Y L+ NVD + +Q+G+T D G P
Sbjct: 20 YPYVTIDVEFAGVVHHPPYTGSRPTPDEIYAALKSNVDEVPAVQIGITLSDAEGNLP 76
>10_08_0041 - 14374684-14377339,14377371-14378233
Length = 1172
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = +3
Query: 321 DAVRKFWFHI-TSSGQ*LWYKXCLESQFA*XIPXNXTVQXYHWVXMDTEFPXVVARPIGE 497
D + +H+ T++ Q +W + C+E QF + + ++ +D EF A +
Sbjct: 634 DGKQNLVYHLATATVQSVWRENCME-QFKLVLEALHQPHRHLYIAVDMEFAADAATNVSH 692
Query: 498 XRSTADYXYQLLRCNVDLLRIIQLGLT--FMDENGKTPPAYTTWQFNFKFNL 647
T+ YQ +R V+ I Q+GLT F+ E + P + NF FN+
Sbjct: 693 RPVTSISCYQHMRRYVNGGGIFQMGLTFAFVGEGEQAPSPLIALEINFDFNV 744
>10_08_0038 - 14336633-14336864,14336970-14337187,14337302-14339020
Length = 722
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 363 Q*LWYKXCLESQFA*XIPXNXTVQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCN 542
Q +W + C+E QF + ++ +D EF A + T+ YQ +R
Sbjct: 330 QSVWQENCME-QFKLVLEALHQPHRNLYIAVDMEFTADAATNMSHRPVTSTSCYQHVRRY 388
Query: 543 VDLLRIIQLGLTFM---DENGKTPPA-YTTWQFNFKFNL 647
V+ I+Q+GLTF D G+ P+ + NF FN+
Sbjct: 389 VNGGDIVQMGLTFAFVGDVEGEQAPSPPIALEINFDFNV 427
>06_03_0342 + 19737951-19738772
Length = 273
Score = 31.5 bits (68), Expect = 0.60
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 507 TADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPPAYTTWQFNF-KFNL 647
TA+ YQ++R N D L+ +QLGL +G W+FN +F+L
Sbjct: 57 TAEERYQVVRANADELKPLQLGLAVRTADG----GRFAWEFNLNEFDL 100
>06_03_0183 + 17642639-17643428,17644507-17644949
Length = 410
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 507 TADYXYQLLRCNVDLLRIIQLGLTFMDENG 596
TA+ Y +L+ NVD LR IQ+GL +G
Sbjct: 308 TAEQRYGVLKANVDALRAIQVGLAIRTGDG 337
>10_08_0040 + 14360543-14361778,14361787-14362782,14362791-14363657
Length = 1032
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 444 WVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFM------DENGKTP 605
++ +D EF I T+ Y LR V+ I+Q+GLTF+ + +
Sbjct: 580 YIAVDMEFAADATTNIRRRPVTSTGCYHHLREFVNRGDIVQMGLTFVFVGDGEQSSSSSS 639
Query: 606 PAYTTWQFNFKFNL 647
P T + NFK N+
Sbjct: 640 PPPITLEINFKINI 653
>08_02_0757 +
20840885-20841281,20842937-20843025,20843132-20843257,
20843617-20844333,20844420-20844630,20844739-20845238,
20845998-20846023,20846393-20846531,20846579-20846660,
20846990-20847153
Length = 816
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 244 TQNKSKTTASKKTDNSSRLETDKRYKMPSASFGSISL 354
T+ S + ++K + ETD + +PSA+FGS SL
Sbjct: 346 TKGASSSDGAQKRKRDAFSETDPQQCVPSAAFGSDSL 382
>04_04_1216 +
31811403-31812267,31813187-31813877,31813981-31814131,
31814289-31814351,31814590-31814664,31814934-31815032
Length = 647
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 271 SKKTDNSSRLETDKRYKMPSASFGSISLPAGSDCG 375
S TD + E KRY+ P A S+ + +GSD G
Sbjct: 44 SHLTDAGNGGEEQKRYEAPDAPSFSVGIDSGSDGG 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,871,556
Number of Sequences: 37544
Number of extensions: 256137
Number of successful extensions: 575
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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