Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_M05
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    27   0.51 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.6  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   8.3  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 373 HNHCPLEVIWNQNLRTASCIVYPFPNEKNYLFFSTPWF 260
           HN C L VIW     ++ C+ +    E+ Y+  + P+F
Sbjct: 130 HNLCVLRVIWRVFGISSGCVAFVMALER-YIALAKPFF 166


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -1

Query: 406 HANCDSKHXLYHNHCPLEVIWNQNLRTASCIVYPFPNEKNYLFFS 272
           H      H  +H+H P     +Q   +AS   YP P E  Y  F+
Sbjct: 177 HPGHSQHHHHHHHHHPHH---SQQQHSASPRCYPMPPEHMYNMFN 218


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 314 DTRCRPQVLVPYHFQRAVIVV*XMFGITI 400
           D +C    + PYH++R V     + G+T+
Sbjct: 119 DLKCDSVCVNPYHYERVVSPGIDLSGLTL 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,039
Number of Sequences: 2352
Number of extensions: 11311
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)