Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_M05
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1 pro... 124 2e-28
BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription ... 124 2e-28
BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription ... 124 2e-28
BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription ... 124 2e-28
BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein. 124 2e-28
AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein. 124 2e-28
AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor ... 114 2e-25
BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription ... 114 3e-25
BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein. 114 3e-25
AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens ... 114 3e-25
AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein. 114 3e-25
AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein. 105 1e-22
AK094877-1|BAC04447.1| 138|Homo sapiens protein ( Homo sapiens ... 30 8.2
>L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1
protein.
Length = 262
Score = 124 bits (300), Expect = 2e-28
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
++ Y++V MDTEFP VVARPIGE RS ADY YQLLRCNVDLL+IIQLGLTFM+E G+ PP
Sbjct: 8 IRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP 67
Query: 609 AYTTWQFNFKFNL 647
+TWQFNFKFNL
Sbjct: 68 GTSTWQFNFKFNL 80
>BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 246
Score = 124 bits (300), Expect = 2e-28
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
++ Y++V MDTEFP VVARPIGE RS ADY YQLLRCNVDLL+IIQLGLTFM+E G+ PP
Sbjct: 31 IRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP 90
Query: 609 AYTTWQFNFKFNL 647
+TWQFNFKFNL
Sbjct: 91 GTSTWQFNFKFNL 103
>BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 124 bits (300), Expect = 2e-28
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
++ Y++V MDTEFP VVARPIGE RS ADY YQLLRCNVDLL+IIQLGLTFM+E G+ PP
Sbjct: 31 IRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP 90
Query: 609 AYTTWQFNFKFNL 647
+TWQFNFKFNL
Sbjct: 91 GTSTWQFNFKFNL 103
>BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 124 bits (300), Expect = 2e-28
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
++ Y++V MDTEFP VVARPIGE RS ADY YQLLRCNVDLL+IIQLGLTFM+E G+ PP
Sbjct: 31 IRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP 90
Query: 609 AYTTWQFNFKFNL 647
+TWQFNFKFNL
Sbjct: 91 GTSTWQFNFKFNL 103
>BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein.
Length = 246
Score = 124 bits (300), Expect = 2e-28
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
++ Y++V MDTEFP VVARPIGE RS ADY YQLLRCNVDLL+IIQLGLTFM+E G+ PP
Sbjct: 31 IRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP 90
Query: 609 AYTTWQFNFKFNL 647
+TWQFNFKFNL
Sbjct: 91 GTSTWQFNFKFNL 103
>AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein.
Length = 285
Score = 124 bits (300), Expect = 2e-28
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
++ Y++V MDTEFP VVARPIGE RS ADY YQLLRCNVDLL+IIQLGLTFM+E G+ PP
Sbjct: 31 IRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP 90
Query: 609 AYTTWQFNFKFNL 647
+TWQFNFKFNL
Sbjct: 91 GTSTWQFNFKFNL 103
>AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor 1
protein.
Length = 292
Score = 114 bits (275), Expect = 2e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
V Y ++ MDTEFP VV RPIGE RS+ DY YQLLRCNVDLL+IIQLGLTF +E G+ P
Sbjct: 31 VPSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90
Query: 609 AYTTWQFNFKFNL 647
TWQFNFKFNL
Sbjct: 91 GINTWQFNFKFNL 103
>BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription
complex, subunit 8 protein.
Length = 292
Score = 114 bits (274), Expect = 3e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
V Y ++ MDTEFP VV RPIGE RS+ DY YQLLRCNVDLL+IIQLGLTF +E G+ P
Sbjct: 31 VLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90
Query: 609 AYTTWQFNFKFNL 647
TWQFNFKFNL
Sbjct: 91 GINTWQFNFKFNL 103
>BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein.
Length = 292
Score = 114 bits (274), Expect = 3e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
V Y ++ MDTEFP VV RPIGE RS+ DY YQLLRCNVDLL+IIQLGLTF +E G+ P
Sbjct: 31 VLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90
Query: 609 AYTTWQFNFKFNL 647
TWQFNFKFNL
Sbjct: 91 GINTWQFNFKFNL 103
>AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21705 fis, clone COL09940. ).
Length = 292
Score = 114 bits (274), Expect = 3e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
V Y ++ MDTEFP VV RPIGE RS+ DY YQLLRCNVDLL+IIQLGLTF +E G+ P
Sbjct: 31 VLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90
Query: 609 AYTTWQFNFKFNL 647
TWQFNFKFNL
Sbjct: 91 GINTWQFNFKFNL 103
>AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein.
Length = 292
Score = 114 bits (274), Expect = 3e-25
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
V Y ++ MDTEFP VV RPIGE RS+ DY YQLLRCNVDLL+IIQLGLTF +E G+ P
Sbjct: 31 VLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90
Query: 609 AYTTWQFNFKFNL 647
TWQFNFKFNL
Sbjct: 91 GINTWQFNFKFNL 103
>AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein.
Length = 292
Score = 105 bits (252), Expect = 1e-22
Identities = 48/73 (65%), Positives = 54/73 (73%)
Frame = +3
Query: 429 VQXYHWVXMDTEFPXVVARPIGEXRSTADYXYQLLRCNVDLLRIIQLGLTFMDENGKTPP 608
V Y ++ MDTEFP VV RPIGE RS+ DY YQLLRCNVDLL+IIQLGLTF +E G+ P
Sbjct: 31 VLSYSYIAMDTEFPGVVVRPIGEFRSSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYPS 90
Query: 609 AYTTWQFNFKFNL 647
TWQFN K L
Sbjct: 91 GINTWQFNCKLYL 103
>AK094877-1|BAC04447.1| 138|Homo sapiens protein ( Homo sapiens
cDNA FLJ37558 fis, clone BRCOC1000087. ).
Length = 138
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 81 SCNKISEKKPIILSCDSIFPRNVFKLIPQQYSMFIDNL 194
SC ISEK+ ++L C + PR + P ID++
Sbjct: 53 SCESISEKQSLVLVCQKLLPRLLQGRFPSPVQDDIDSI 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,448,343
Number of Sequences: 237096
Number of extensions: 1520863
Number of successful extensions: 2488
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2488
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -