Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_L18
(651 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0) 229 1e-60
SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 6e-37
SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012) 100 9e-22
SB_45252| Best HMM Match : DIT1_PvcA (HMM E-Value=6.5e-07) 31 0.81
SB_16252| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 31 0.81
SB_58829| Best HMM Match : HC2 (HMM E-Value=5.8) 31 1.1
SB_5543| Best HMM Match : Kelch_1 (HMM E-Value=1.4e-06) 29 2.5
SB_43439| Best HMM Match : AhpC-TSA (HMM E-Value=9.80909e-44) 28 5.7
>SB_14608| Best HMM Match : AhpC-TSA (HMM E-Value=0)
Length = 265
Score = 229 bits (560), Expect = 1e-60
Identities = 113/182 (62%), Positives = 137/182 (75%), Gaps = 2/182 (1%)
Frame = +3
Query: 111 IVKQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPAPDFSATAV-VNGEFNQLKLSDFT 287
+V Q R+ +PAF +AKR+ + + +QKPAP FS TAV +GEF LKLSD+
Sbjct: 22 LVLQQPRNA-APAFHLAKRMMSFSRADMSKTAIQKPAPAFSGTAVNKHGEFIDLKLSDYK 80
Query: 288 GKYVVLFFYPLDFTFVCPTELIXFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDG 467
GKYVVLFFYPLDFTFVCPTE+I FSD+ +F I+C+VI S DSE+SHLAW N PRK G
Sbjct: 81 GKYVVLFFYPLDFTFVCPTEIIAFSDRVDEFKAINCEVIACSVDSEYSHLAWTNVPRKKG 140
Query: 468 GLGKMEIPLLADYKKQISKDYDVLLDD-GFALRGLFIIDRNGTLRHMSVNDLPVGRSVDE 644
G+G + IP+L+D KQISKDY VLL+D G ALRGLFIID G LR +++NDLPVGRSVDE
Sbjct: 141 GIGNINIPILSDLTKQISKDYGVLLEDQGVALRGLFIIDDKGILRQITINDLPVGRSVDE 200
Query: 645 TL 650
TL
Sbjct: 201 TL 202
>SB_22073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 123 bits (296), Expect(2) = 6e-37
Identities = 52/80 (65%), Positives = 65/80 (81%)
Frame = +3
Query: 204 KVQKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCPTELIXFSDKAKDFA 383
++ KPAP + TAVVNGEF +LKLSDF GKY+V FFYPLDFTFVCPTE+I FSD+ ++F
Sbjct: 55 QISKPAPFWEGTAVVNGEFKELKLSDFEGKYLVFFFYPLDFTFVCPTEIIAFSDRIEEFR 114
Query: 384 GIDCQVIGVSTDSEFSHLAW 443
I+ +V+G S DS F+HLAW
Sbjct: 115 AINTEVVGCSVDSVFTHLAW 134
Score = 49.2 bits (112), Expect(2) = 6e-37
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = +3
Query: 564 GLFIIDRNGTLRHMSVNDLPVGRSVDETL 650
GLFIID G LR +++NDLPVGRSVDETL
Sbjct: 135 GLFIIDDKGVLRQITMNDLPVGRSVDETL 163
>SB_29430| Best HMM Match : AhpC-TSA (HMM E-Value=0.00012)
Length = 704
Score = 100 bits (240), Expect = 9e-22
Identities = 48/69 (69%), Positives = 56/69 (81%), Gaps = 1/69 (1%)
Frame = +3
Query: 447 NTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDD-GFALRGLFIIDRNGTLRHMSVNDLP 623
N PRK GG+G + IP+L+D KQISKDY VLL+D G ALRGLFIID G LR +++NDLP
Sbjct: 3 NVPRKKGGIGNINIPILSDLTKQISKDYGVLLEDQGVALRGLFIIDDKGILRQITINDLP 62
Query: 624 VGRSVDETL 650
VGRSVDETL
Sbjct: 63 VGRSVDETL 71
>SB_45252| Best HMM Match : DIT1_PvcA (HMM E-Value=6.5e-07)
Length = 211
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 120 QLSRSVLSPAFKVAKRIN-FSTTSTTRAPKVQKPAPDFSATAVVNGEFNQLKLSDFTGK 293
QL++SVLS + + I TT PK +P + ATA++ + + L F GK
Sbjct: 17 QLAQSVLSKVMQFRRMIEECQDNCTTECPKCHRPHENKVATAIMQNKKIRFVLPGFPGK 75
>SB_16252| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 580
Score = 31.1 bits (67), Expect = 0.81
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Frame = +3
Query: 48 VDCLGFKYNPKSLLTHAKMSFIV--KQLSRSVLSPAFKVAKRINFSTTSTTRAPKVQKPA 221
+D LGF Y+ S++ + M+F K + +P+ + +R+NFS T K+
Sbjct: 245 IDSLGFPYDYNSIMHYQNMAFSSNGKNTIQKPNAPSEPLGQRLNFSDTDVLELKKL---- 300
Query: 222 PDFSATAVVNGEFNQ 266
+S +A V+G + +
Sbjct: 301 --YSCSAPVDGHWGR 313
>SB_58829| Best HMM Match : HC2 (HMM E-Value=5.8)
Length = 959
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK V NQ
Sbjct: 599 HHNQCQTTLLKQVHHNQCHTTLLKQVHHNQ 628
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK V NQ
Sbjct: 794 HHNQCHTTLLKQAHHNKCHTTLLKQVHHNQ 823
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK V NQ
Sbjct: 651 HHNQCHTALLKQLHHNQCHTTLLKQVHHNQ 680
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK V NQ
Sbjct: 755 HHNQCHTALLKQLHHNQCHTTLLKQVHHNQ 784
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK NQ
Sbjct: 664 HHNQCHTTLLKQVHHNQCHTTLLKQAHHNQ 693
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T L Q HH H LLK V NQ
Sbjct: 703 HHNQCQTTLFKQVHHNQCHTTLLKQVHHNQ 732
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK NQ
Sbjct: 768 HHNQCHTTLLKQVHHNQCHTTLLKQAHHNQ 797
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK NQ
Sbjct: 833 HHNQCHTTLLKQVHHHQCHTTLLKQAHHNQ 862
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK V N+
Sbjct: 872 HHNQCHTTLLKQAHHNQCHTTLLKQVHHNK 901
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK + NQ
Sbjct: 677 HHNQCHTTLLKQAHHNQCHTALLKQLHHNQ 706
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK V +Q
Sbjct: 820 HHNQCQTTLLKQVHHNQCHTTLLKQVHHHQ 849
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK + NQ
Sbjct: 846 HHHQCHTTLLKQAHHNQCHTTLLKQLHHNQ 875
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH H LLK NQ
Sbjct: 859 HHNQCHTTLLKQLHHNQCHTTLLKQAHHNQ 888
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 588 HYGRL*TNLLMQTHHQVIHHNLLKSVFCNQ 499
H+ + T LL Q HH LLK V NQ
Sbjct: 807 HHNKCHTTLLKQVHHNQCQTTLLKQVHHNQ 836
>SB_5543| Best HMM Match : Kelch_1 (HMM E-Value=1.4e-06)
Length = 260
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2
Query: 458 PRSVDPCEMTELRVCGHSNHLTIDSSKVFSFITERYELCRTYKC 327
P DPCE T GHS + D+ +F ++ C T C
Sbjct: 11 PSEEDPCECTPYMRYGHSASIVDDTVYIFGGRSDVQGACNTLYC 54
>SB_43439| Best HMM Match : AhpC-TSA (HMM E-Value=9.80909e-44)
Length = 246
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 282 FTGKYVVLFFYPLDFTFVC-PTELIXFSDKAKDF--AGIDCQVIGVSTDSEFSHLAW 443
F GK VVLF P FT C T L +++ A F G+D +I +S + F +W
Sbjct: 32 FAGKTVVLFALPGAFTPTCSSTHLPRYNELAPVFKAQGVD-DIICLSVNDTFVMNSW 87
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,222,222
Number of Sequences: 59808
Number of extensions: 393287
Number of successful extensions: 1258
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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