Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_L18
(651 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)... 190 5e-49
At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putat... 190 9e-49
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 67 1e-11
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 60 1e-09
At3g08950.1 68416.m01045 electron transport SCO1/SenC family pro... 35 0.054
At5g45170.1 68418.m05545 CbbY protein-related low similarity to ... 31 0.66
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 31 0.66
At5g02180.1 68418.m00139 amino acid transporter family protein b... 29 2.0
At3g14870.1 68416.m01880 expressed protein contains Pfam profile... 28 4.7
At1g50830.1 68414.m05716 hypothetical protein 28 4.7
At5g07870.1 68418.m00906 transferase family protein similar to a... 28 6.2
At1g58227.1 68414.m06616 hypothetical protein 28 6.2
At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory /... 27 8.2
>At3g11630.1 68416.m01425 2-cys peroxiredoxin, chloroplast (BAS1)
identical to SP|Q96291 2-cys peroxiredoxin BAS1,
chloroplast precursor {Arabidopsis thaliana}; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 266
Score = 190 bits (464), Expect = 5e-49
Identities = 102/204 (50%), Positives = 138/204 (67%), Gaps = 13/204 (6%)
Frame = +3
Query: 78 KSLLTHAKMSFIVKQLSRSVLSPAFK--VAKRINFSTTS----TTRA-----PKVQKPAP 224
KS L+ +SF+ + LS S + + A+R + S+TS +A P V AP
Sbjct: 22 KSSLSSPSVSFL-RTLSSPSASASLRSGFARRSSLSSTSRRSFAVKAQADDLPLVGNKAP 80
Query: 225 DFSATAVVNGEFNQLKLSDFTGK-YVVLFFYPLDFTFVCPTELIXFSDKAKDFAGIDCQV 401
DF A AV + EF ++KLSD+ GK YV+LFFYPLDFTFVCPTE+ FSD+ +F ++ +V
Sbjct: 81 DFEAEAVFDQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEV 140
Query: 402 IGVSTDSEFSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLL-DDGFALRGLFII 578
+GVS DS FSHLAW+ T RK GGLG + PL++D K ISK + VL+ D G ALRGLFII
Sbjct: 141 LGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQGIALRGLFII 200
Query: 579 DRNGTLRHMSVNDLPVGRSVDETL 650
D+ G ++H ++N+L +GRSVDET+
Sbjct: 201 DKEGVIQHSTINNLGIGRSVDETM 224
>At5g06290.1 68418.m00705 2-cys peroxiredoxin, chloroplast, putative
very strong similarity to SP|Q96291 2-cys peroxiredoxin
BAS1, chloroplast precursor {Arabidopsis thaliana};
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 273
Score = 190 bits (462), Expect = 9e-49
Identities = 91/167 (54%), Positives = 121/167 (72%), Gaps = 3/167 (1%)
Frame = +3
Query: 159 AKRINFSTTSTTR-APKVQKPAPDFSATAVVNGEFNQLKLSDFTGK-YVVLFFYPLDFTF 332
A R NF+ + P V APDF A AV + EF ++KLS++ GK YV+LFFYPLDFTF
Sbjct: 65 ASRRNFAVKAQADDLPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTF 124
Query: 333 VCPTELIXFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDGGLGKMEIPLLADYKK 512
VCPTE+ FSD+ ++F ++ +V+GVS DS FSHLAW+ T RK GGLG + PL++D K
Sbjct: 125 VCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITK 184
Query: 513 QISKDYDVLL-DDGFALRGLFIIDRNGTLRHMSVNDLPVGRSVDETL 650
ISK + VL+ D G ALRGLFIID+ G ++H ++N+L +GRSVDET+
Sbjct: 185 SISKSFGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETM 231
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 66.9 bits (156), Expect = 1e-11
Identities = 58/198 (29%), Positives = 93/198 (46%), Gaps = 7/198 (3%)
Frame = +3
Query: 78 KSLLTHAKMSFIVKQLSRSVLSPAFKVAKRINFSTTSTTRA---PKVQK--PAPDFSATA 242
K+L+T + S K + + I+ ++S+ + KV K APDF+
Sbjct: 23 KTLVTKTQFSVPTKSSESNFFGSTLTHSSYISPVSSSSLKGLIFAKVNKGQAAPDFTLKD 82
Query: 243 VVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCPTELIXFSDKAKDFAGIDCQVIGVSTDS 422
NG+ + L + GK VVL+FYP D T C + F D + F +VIG+S D
Sbjct: 83 Q-NGK--PVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDD 139
Query: 423 EFSHLAWINTPRKDGGLGKMEIPLLADYKKQISKDYDVLLDDGFALRG--LFIIDRNGTL 596
SH A+ + K+ LL+D ++ KD+ V D AL G +++D+NG +
Sbjct: 140 SASHKAFASK-------YKLPYTLLSDEGNKVRKDWGVPGDLFGALPGRQTYVLDKNGVV 192
Query: 597 RHMSVNDLPVGRSVDETL 650
+ + N + +DETL
Sbjct: 193 QLIYNNQFQPEKHIDETL 210
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Frame = +3
Query: 261 NQLKLSD-FTGKYVVLFFYPLDFTFVCPTELIXFSDKAKDFAGIDCQVIGVSTDSEFSHL 437
++ KL D F + VLF +P DFT VC TEL + A +F +++G+S D SH
Sbjct: 20 DKFKLHDYFANSWTVLFSHPGDFTPVCTTELGAMAKYAHEFDKRGVKLLGLSCDDVQSHK 79
Query: 438 AWINTPRKDGGLGKMEIPLLADYKKQISKDYDVL--LDDGFALRGLFIIDRNGTLRHMSV 611
WI K+ P++AD K+I +++ +++G R L I+ + ++ +
Sbjct: 80 DWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNMIDPIENG-PSRALHIVGPDSKIKLSFL 138
Query: 612 NDLPVGRSVDETL 650
GR++DE L
Sbjct: 139 YPSTTGRNMDEVL 151
>At3g08950.1 68416.m01045 electron transport SCO1/SenC family
protein similar to SP|P23833 SCO1 protein, mitochondrial
precursor {Saccharomyces cerevisiae}; contains Pfam
profile PF02630: SCO1/SenC
Length = 334
Score = 34.7 bits (76), Expect = 0.054
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 168 INFSTTSTTRAPKVQKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPLDFTFVCPTE 347
IN ++ + P K A +++ + ++ + GK+ +L+F +CP E
Sbjct: 155 INKNSIAVKEGPSAGKAAIG-GPFSLIRDDGKRVTEKNLMGKWTILYFGFTHCPDICPDE 213
Query: 348 LIXFS---DKAKDFAGIDCQVIGVSTDSE 425
LI + DK K+ +G+D + +S D E
Sbjct: 214 LIKLAAAIDKIKENSGVDVVPVFISVDPE 242
>At5g45170.1 68418.m05545 CbbY protein-related low similarity to
SP|P40119 CbbY protein, chromosomal {Alcaligenes
eutrophus}
Length = 372
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 245 NCCRTEVWSRLLNFRSSCSAGRRKINPFCYFESRRQ 138
+C +T ++++ L+ RSS GRR PF F + Q
Sbjct: 15 SCTKTSIFTQYLSERSSHDTGRRNFLPFSNFPGKSQ 50
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 31.1 bits (67), Expect = 0.66
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +3
Query: 246 VNGEFNQLKLSD-FTGKYVVLFFYPLDFTFVCPTELI----XFSDKAKDFAGIDCQVIGV 410
V+ +F+ LSD F GK VV+F P +T VC + + DK K GID VI V
Sbjct: 58 VSSKFSTTPLSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFK-AKGID-SVICV 115
Query: 411 STDSEFSHLAW 443
S + F+ W
Sbjct: 116 SVNDPFAINGW 126
>At5g02180.1 68418.m00139 amino acid transporter family protein
belongs to INTERPRO:IPR002422 amino acid/polyamine
transporter, family II
Length = 550
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +3
Query: 87 LTHAKMSFIVKQLSRSVLSPAFKVAKRINF--STTSTTRAPKVQKPAPDFSATAVVNGEF 260
+T +SF+ + SR + S +F+ ++ +F S +S++ P + +P PD T +
Sbjct: 83 MTPPSVSFMPQSSSRRLAS-SFQKKQQSSFCDSLSSSSSKPLLSQPVPDKEETILPVNPQ 141
Query: 261 NQLKLS 278
+QLKLS
Sbjct: 142 SQLKLS 147
>At3g14870.1 68416.m01880 expressed protein contains Pfam profile
PF04859: Plant protein of unknown function (DUF641
Length = 445
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = +1
Query: 169 LIFLRPALQELLKFRSLLQTSVRQQLSMESSINLNFQISRENT*FCSSIHWISHLYVRQS 348
+IFL+ QE + L++ + Q + + ++ N +S SS H++++L+
Sbjct: 155 IIFLKEKFQESMTQNKLMEKRLNQSGQLCNPLDHNLHLSA-----VSSTHFVTYLHHTVK 209
Query: 349 SXRSVIKL 372
S R +KL
Sbjct: 210 SIRGFVKL 217
>At1g50830.1 68414.m05716 hypothetical protein
Length = 768
Score = 28.3 bits (60), Expect = 4.7
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Frame = +3
Query: 156 VAKRINFSTTSTTRAPKV-----QKPAPDFSATAVVNGEFNQLKLSDFTGKYVVLFFYPL 320
+ + I ST S T+ P + +K P+ + GE + L D V+L F L
Sbjct: 102 IFEAIKVSTYSITKNPSLILSVSEKWCPETKSFVFPWGEAT-ITLEDVM---VLLGFSVL 157
Query: 321 DFTFVCPTELIXFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDGG 470
P E D K + Q + STD S +W++T GG
Sbjct: 158 GSPVFAPLETSETRDSVKKLENVRIQHMNSSTDRRVSQKSWVSTFLGRGG 207
>At5g07870.1 68418.m00906 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 464
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 160 QKGLIFLRPALQELLKFRSLLQTSVRQ 240
QKGL+FL+P+ E +K + ++T +++
Sbjct: 45 QKGLLFLKPSFSESVKPKEFMETLLQK 71
>At1g58227.1 68414.m06616 hypothetical protein
Length = 1323
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/92 (20%), Positives = 38/92 (41%)
Frame = +3
Query: 303 LFFYPLDFTFVCPTELIXFSDKAKDFAGIDCQVIGVSTDSEFSHLAWINTPRKDGGLGKM 482
+F + +F C L + +D + V EF AW+ M
Sbjct: 1100 IFVFIFEFLSGCKDGLARMKIISDILDLLDSNPMNVEALMEFGWSAWLTA--------SM 1151
Query: 483 EIPLLADYKKQISKDYDVLLDDGFALRGLFII 578
++ ++ DY+ ++ D+ L++ +RGLF +
Sbjct: 1152 KLDVIKDYRSELLNHDDLALNEQHFVRGLFCV 1183
>At1g01040.1 68414.m00004 DEAD/DEAH box helicase carpel factory / CAF
identical to RNA helicase/RNAseIII CAF protein
GB:AAF03534 GI:6102610 from [Arabidopsis thaliana]
Length = 1909
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 453 PRKDGGLGKMEIPLLADYKKQ 515
PRK+G LG +E ADY KQ
Sbjct: 1241 PRKEGYLGPLEYNTYADYYKQ 1261
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,293,255
Number of Sequences: 28952
Number of extensions: 267391
Number of successful extensions: 707
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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