Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_L17
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    24   0.94 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    24   0.94 
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    24   0.94 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.0  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   6.7  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   8.8  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 476 ISAMRLHKICTGXSDPYLYCQLA 408
           I A RL   C+G +  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 476 ISAMRLHKICTGXSDPYLYCQLA 408
           I A RL   C+G +  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 476 ISAMRLHKICTGXSDPYLYCQLA 408
           I A RL   C+G +  YLY +LA
Sbjct: 101 IEANRLFFYCSGLASGYLYLKLA 123


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 569 YTQGPASSSYAISIILQPRGLI 504
           YT+  A   YAI +IL  R L+
Sbjct: 178 YTKPTAIQKYAIPVILSGRDLM 199


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 426 LVLPVGSLVASSLYLRPAISNH 361
           L+LP+  L      ++ AISNH
Sbjct: 57  LILPIYGLSTKPKIMQGAISNH 78


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 523 SMMLIAYDDEAGPCVYKTDPSGYY 594
           + +L+ Y +E    V K DP G Y
Sbjct: 101 TFVLLNYRNEWNQLVAKYDPDGIY 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,459
Number of Sequences: 336
Number of extensions: 2820
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)