BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P02_F_L08 (651 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79 BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79 BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79 AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79 AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 294 2e-79 AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 294 2e-79 U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 292 6e-79 BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 1e-48 AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 165 2e-40 U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 72 2e-12 >BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 294 bits (722), Expect = 2e-79 Identities = 134/191 (70%), Positives = 152/191 (79%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 437 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 438 XXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 617 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180 Query: 618 PXYDAESKKFN 650 P YD+ESK+FN Sbjct: 181 PGYDSESKEFN 191 >BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 294 bits (722), Expect = 2e-79 Identities = 134/191 (70%), Positives = 152/191 (79%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 437 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 438 XXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 617 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180 Query: 618 PXYDAESKKFN 650 P YD+ESK+FN Sbjct: 181 PGYDSESKEFN 191 >BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 294 bits (722), Expect = 2e-79 Identities = 134/191 (70%), Positives = 152/191 (79%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 437 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 438 XXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 617 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180 Query: 618 PXYDAESKKFN 650 P YD+ESK+FN Sbjct: 181 PGYDSESKEFN 191 >AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 294 bits (722), Expect = 2e-79 Identities = 134/191 (70%), Positives = 152/191 (79%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 437 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 438 XXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 617 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180 Query: 618 PXYDAESKKFN 650 P YD+ESK+FN Sbjct: 181 PGYDSESKEFN 191 >AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 variant protein. Length = 297 Score = 294 bits (722), Expect = 2e-79 Identities = 134/191 (70%), Positives = 152/191 (79%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 437 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 438 XXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 617 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180 Query: 618 PXYDAESKKFN 650 P YD+ESK+FN Sbjct: 181 PGYDSESKEFN 191 >AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 variant protein. Length = 303 Score = 294 bits (722), Expect = 2e-79 Identities = 134/191 (70%), Positives = 152/191 (79%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 437 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127 Query: 438 XXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 617 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187 Query: 618 PXYDAESKKFN 650 P YD+ESK+FN Sbjct: 188 PGYDSESKEFN 198 >U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 protein. Length = 297 Score = 292 bits (717), Expect = 6e-79 Identities = 133/191 (69%), Positives = 151/191 (79%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 437 CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120 Query: 438 XXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 617 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180 Query: 618 PXYDAESKKFN 650 P YD+ESK+FN Sbjct: 181 PGYDSESKEFN 191 >BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. Length = 101 Score = 192 bits (467), Expect = 1e-48 Identities = 84/98 (85%), Positives = 95/98 (96%) Frame = +3 Query: 78 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 257 MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60 Query: 258 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 371 CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98 >AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 protein. Length = 126 Score = 165 bits (400), Expect = 2e-40 Identities = 75/125 (60%), Positives = 89/125 (71%) Frame = +3 Query: 228 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 407 +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60 Query: 408 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFRCYLDVGLARTTTGARVFGAMKGAVDGG 587 EYNVE +D P AF CYLD GLARTTTG +VFGA+KGAVDGG Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120 Query: 588 LNVPH 602 L++PH Sbjct: 121 LSIPH 125 >U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein protein. Length = 145 Score = 72.1 bits (169), Expect = 2e-12 Identities = 30/39 (76%), Positives = 36/39 (92%) Frame = +3 Query: 534 TTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFN 650 TTTG +VFGA+KGAVDGGL++PHS KRFP YD+ESK+FN Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFN 39 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 88,569,901 Number of Sequences: 237096 Number of extensions: 1824680 Number of successful extensions: 3397 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 3287 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3388 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7253890590 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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