Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_L06
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   1.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.9  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       22   3.8  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   3.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   3.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = -2

Query: 617 NRRISVEKNKFQADDHNHQKSQTCRRDLHIQPNQNHHHPLERN-HYHPRLLNH 462
           NRR+  +KN         Q +Q    +     NQNHHH    + H    ++NH
Sbjct: 293 NRRMKNKKNS------QRQAAQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNH 339


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 347 PPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDNDST 472
           P T+S   + ++   EDP Q EAA  +   +  +   D  ST
Sbjct: 378 PITSSGSTDSSSQSVEDPQQVEAAIVHLIANLPSPGSDQRST 419


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 371 EPATPEPEDPVQEEAAAENDKPSCSTSSKDNDS 469
           + A  +PE+ V++E  ++ +KP+ S   KD+ S
Sbjct: 71  QQAGKKPEN-VKKEDESDEEKPTTSFKLKDSSS 102



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 572 HNHQKSQTCRRDLHIQPNQNH 510
           H   K Q C ++L I P+Q H
Sbjct: 605 HIVPKLQLCMQNLVINPHQQH 625


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 563 QKSQTCRRDLHIQPNQNHHHPLE 495
           +K Q   +  H   +Q+HH P++
Sbjct: 91  EKQQKIEQQTHSSIHQHHHDPMK 113


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 518 QNHHHPLERNHYHPRLLNHCLL-KM*SKTAYHFQPLLPLE 402
           QNH++  E++HY   + ++C      S  +Y F  ++ LE
Sbjct: 104 QNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIMGLE 143


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 518 QNHHHPLERNHYHPRLLNHCLL-KM*SKTAYHFQPLLPLE 402
           QNH++  E++HY   + ++C      S  +Y F  ++ LE
Sbjct: 104 QNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIMGLE 143


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 563 QKSQTCRRDLHIQPNQNHHHPLE 495
           +K Q   +  H   +Q+HH P++
Sbjct: 242 EKQQKIEQQTHSSIHQHHHDPMK 264


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 563 QKSQTCRRDLHIQPNQNHHHPLE 495
           +K Q   +  H   +Q+HH P++
Sbjct: 301 EKQQKIEQQTHSSIHQHHHDPMK 323


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 309 LLKKERSLCKTTNLRPPPTSAN 374
           +L   + +C++ N +PP TS++
Sbjct: 105 ILHDTQPMCESLNTQPPVTSSS 126


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 309 LLKKERSLCKTTNLRPPPTSAN 374
           +L   + +C++ N +PP TS++
Sbjct: 105 ILHDTQPMCESLNTQPPVTSSS 126


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 309 LLKKERSLCKTTNLRPPPTSAN 374
           +L   + +C++ N +PP TS++
Sbjct: 105 ILHDTQPMCESLNTQPPVTSSS 126


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 521 NQNHHHPLERNHYHPRLLNH 462
           +QN++ P +R H +  L +H
Sbjct: 100 HQNYNEPYQRTHENMLLRHH 119


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 521 NQNHHHPLERNHYHPRLLNH 462
           +QN++ P +R H +  L +H
Sbjct: 100 HQNYNEPYQRTHENMLLRHH 119


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 521 NQNHHHPLERNHYHPRLLNH 462
           +QN++ P +R H +  L +H
Sbjct: 100 HQNYNEPYQRTHENMLLRHH 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,124
Number of Sequences: 336
Number of extensions: 2342
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)