Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P02_F_L06
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC025724-5|AAG23374.1| 264|Caenorhabditis elegans Hypothetical ... 35 0.057
U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily ass... 31 0.93
AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical ... 30 1.6
AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical ... 30 1.6
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 29 2.1
Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical pr... 29 3.8
U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plu... 29 3.8
AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 3.8
AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein. 29 3.8
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 28 5.0
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 28 5.0
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 28 5.0
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 28 5.0
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 28 5.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 5.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.0
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 28 5.0
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 28 5.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81072-5|CAB03020.1| 591|Caenorhabditis elegans Hypothetical pr... 28 6.6
U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 28 6.6
AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlec... 28 6.6
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 23 7.4
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 23 7.4
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81124-12|CAI46579.2| 489|Caenorhabditis elegans Hypothetical p... 27 8.7
Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical p... 27 8.7
Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical pr... 27 8.7
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 27 8.7
DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin p... 27 8.7
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 27 8.7
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 27 8.7
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.008
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Frame = +2
Query: 80 GNFSIAESTLISMESSEVAKEEVVQETGDLNGAKAGPDTDREAGESSGVLIQLEEEAQDD 259
GN S E T S V +E+ V+ T + + EA +S + EE++++
Sbjct: 159 GNVSAEEVTTTSSTEVSVEEEQTVKSTEASTEEEKSTEASEEATTTSSETSETTEESEEE 218
Query: 260 LRTTRKRKMILXXXXXXXXXXXXSVQNDEPP--TASDEREPATPEPEDPVQEEAAAENDK 433
TT+ K + ++ + +E+ TPEP E+ +++
Sbjct: 219 ETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKEEKVTTTPEPSTEESSESPETSEE 278
Query: 434 PSCSTSSKDNDST 472
P S S+ ++ +
Sbjct: 279 PQSSESTPTSEES 291
>AC025724-5|AAG23374.1| 264|Caenorhabditis elegans Hypothetical
protein Y67D8C.6 protein.
Length = 264
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = -1
Query: 222 PEDSPASRSVSG-PALAPFRSPVSWTTSSLAT-SLDSMLISVDSAIEKLPKI 73
P +SP SRSVS +L+ FRSPVS T+ L+ S S+ + D +E + ++
Sbjct: 2 PRNSPPSRSVSSLSSLSTFRSPVSSTSGYLSDYSGGSIFLEDDEEVEVMARV 53
>U58728-1|AAB00588.1| 430|Caenorhabditis elegans Temporarily
assigned gene nameprotein 294 protein.
Length = 430
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 227 LIQLEEEAQDDLRTTRKRKMILXXXXXXXXXXXXSVQNDEPPTASDEREPATPEPEDPVQ 406
++Q + E + L+ + + V+ +EP AS+ +P TP PE Q
Sbjct: 79 MVQKQVEKEKSLKRKERSLLKSATRELSEGVSTKEVKIEEPDIASE--KPRTPVPEK--Q 134
Query: 407 EEAAAEN-DKPSCSTSSKDNDST 472
EE + EN + C T +K +T
Sbjct: 135 EEVSVENVEIEKCETPTKSKSAT 157
>AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical
protein F18A12.2 protein.
Length = 274
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 350 PTASDEREPATPEPEDPVQE 409
P AS +REP P+PE+P E
Sbjct: 132 PEASQQREPTPPKPEEPPNE 151
>AC024817-3|AAK68524.1| 482|Caenorhabditis elegans Hypothetical
protein Y54G2A.11a protein.
Length = 482
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKPS-CSTSSKDND 466
E A++ E + E ED V+EE A END S S S+D+D
Sbjct: 89 EEGAAAEILENSDNEGEDEVEEEGAIENDSESENSEDSEDSD 130
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
Frame = +2
Query: 119 ESSEVAKEEVVQETGDLNGAKAGPDTDREAGESSGVLIQLEEEAQDDLRTTRKRKMILXX 298
ES E EE QE DL + + ++E E + + E+ +++ + K++
Sbjct: 169 ESVEGEDEEESQEVEDLKEDEKMEEDEKEEEEDVQLESEKNEKEEEEEKVEEKKEE--EE 226
Query: 299 XXXXXXXXXXSVQNDEPPTASDEREPATPEPEDP-VQEEAAAENDKPSCSTSS 454
V+ T E ATPEP +P E+A EN S + +
Sbjct: 227 EEEEEEIQLVIVEKTVIETTIVEPAVATPEPSEPSSSEKAVVENGSSSAAAGN 279
>Z82073-3|CAB04926.1| 631|Caenorhabditis elegans Hypothetical
protein W06D12.5 protein.
Length = 631
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +2
Query: 218 SGVLIQLEEEAQDDLRTTRKRKMILXXXXXXXXXXXXSVQNDEPPTASDEREPATPEPED 397
S VL ++ EE QD + + + +++++E P S P ED
Sbjct: 19 SAVLEEIHEEEQDSIPEEDETNLEKPSHSENDFKRKNAIRSEETPEIS----PEIQRIED 74
Query: 398 PVQEEAAAENDKPSCSTSSKDN 463
P+ EN+KP + S N
Sbjct: 75 PLASSDEEENEKPFARSISVSN 96
>Z68296-5|CAD59142.2| 1677|Caenorhabditis elegans Hypothetical protein
C46C2.1b protein.
Length = 1677
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 566 HQKSQTCR-RDLHIQPNQNHHHPLERNHYHP 477
H+ +Q+ R H QP+ H HP +NHYHP
Sbjct: 1604 HRDNQSAPPRHHHHQPHPPH-HPHLQNHYHP 1633
>Z68296-4|CAA92591.3| 1838|Caenorhabditis elegans Hypothetical protein
C46C2.1a protein.
Length = 1838
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 566 HQKSQTCR-RDLHIQPNQNHHHPLERNHYHP 477
H+ +Q+ R H QP+ H HP +NHYHP
Sbjct: 1765 HRDNQSAPPRHHHHQPHPPH-HPHLQNHYHP 1794
>U70850-3|AAB09122.3| 596|Caenorhabditis elegans Zinc finger plus
homeodomain, axonguidance protein 1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 329 SVQNDEPPTASDERE-PATPEPEDPVQEEAAAEND-KPSCSTSSKDNDS 469
S++N PT + E PA+PEP+ V +E ++ K T K DS
Sbjct: 132 SLENGTSPTPTQEPSAPASPEPKIEVVDEPEVSSEVKTEVKTEVKTEDS 180
>AY289599-1|AAP43944.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 329 SVQNDEPPTASDERE-PATPEPEDPVQEEAAAEND-KPSCSTSSKDNDS 469
S++N PT + E PA+PEP+ V +E ++ K T K DS
Sbjct: 132 SLENGTSPTPTQEPSAPASPEPKIEVVDEPEVSSEVKTEVKTEVKTEDS 180
>AY224511-1|AAP37457.1| 596|Caenorhabditis elegans ZAG-1 protein.
Length = 596
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 329 SVQNDEPPTASDERE-PATPEPEDPVQEEAAAEND-KPSCSTSSKDNDS 469
S++N PT + E PA+PEP+ V +E ++ K T K DS
Sbjct: 132 SLENGTSPTPTQEPSAPASPEPKIEVVDEPEVSSEVKTEVKTEVKTEDS 180
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 374 PATPEPEDPVQEEAAAENDKPSCST 448
P TP P++PVQ + + N+ C++
Sbjct: 443 PTTPTPQNPVQSQESCFNENQCCAS 467
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 530 IQPNQNHHHPLERNHYHPRLLNHCLLKM 447
++ HHH E NH P N+C K+
Sbjct: 45 LEGTSGHHHWTETNHPRPTFCNYCREKL 72
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 329 SVQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDNDST 472
S+ PPT REP+T +D E + S S K + ST
Sbjct: 624 SIGTVHPPTPGATREPSTAYDDDEENENVENRKEIDQKSNSKKSSVST 671
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -2
Query: 530 IQPNQNHHHPLERNHYHPRLLNHCLLKM 447
++ HHH E NH P N+C K+
Sbjct: 45 LEGTSGHHHWTETNHPRPTFCNYCREKL 72
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +2
Query: 329 SVQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDNDST 472
S+ PPT REP+T +D E + S S K + ST
Sbjct: 624 SIGTVHPPTPGATREPSTAYDDDEENENVENRKEIDQKSNSKKSSVST 671
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 119 ESSEVAKEEVVQETGDLNGAKAGPDTDREAGESSGVLIQLEEEAQ 253
E E + EE + +G+ +G +G + +GESSG +EE+ Q
Sbjct: 358 ECQETSGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQ 402
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 119 ESSEVAKEEVVQETGDLNGAKAGPDTDREAGESSGVLIQLEEEAQ 253
E E + EE + +G+ +G +G + +GESSG +EE+ Q
Sbjct: 358 ECQETSGEESGEASGEQSGEGSGEASGEASGESSGEGSGVEEQNQ 402
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 5.0
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Frame = +2
Query: 89 SIAESTL--ISMESSEVAKEEVVQETGDLNGAKAGP-DTDREAGESSGVLIQLEEEAQDD 259
++ E+T+ I+ S E AK++V ++T + K D ++++ SG+ + E + + +
Sbjct: 9121 AVTETTVQKITNPSDESAKKDVNEDTAVSSIVKKDDKDVNKKSLPESGLTTKKEIQGKPE 9180
Query: 260 LRTTRKRKMILXXXXXXXXXXXXSVQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPS 439
+ +K+ ++ D T E EPA E VQ+E + + S
Sbjct: 9181 KKIMKKKT---EKADSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTS 9237
Query: 440 CSTSSKD 460
S + +
Sbjct: 9238 KSKQTTE 9244
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.0
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Frame = +2
Query: 89 SIAESTL--ISMESSEVAKEEVVQETGDLNGAKAGP-DTDREAGESSGVLIQLEEEAQDD 259
++ E+T+ I+ S E AK++V ++T + K D ++++ SG+ + E + + +
Sbjct: 9141 AVTETTVQKITNPSDESAKKDVNEDTAVSSIVKKDDKDVNKKSLPESGLTTKKEIQGKPE 9200
Query: 260 LRTTRKRKMILXXXXXXXXXXXXSVQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPS 439
+ +K+ ++ D T E EPA E VQ+E + + S
Sbjct: 9201 KKIMKKKT---EKADSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTS 9257
Query: 440 CSTSSKD 460
S + +
Sbjct: 9258 KSKQTTE 9264
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.0
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Frame = +2
Query: 89 SIAESTL--ISMESSEVAKEEVVQETGDLNGAKAGP-DTDREAGESSGVLIQLEEEAQDD 259
++ E+T+ I+ S E AK++V ++T + K D ++++ SG+ + E + + +
Sbjct: 9141 AVTETTVQKITNPSDESAKKDVNEDTAVSSIVKKDDKDVNKKSLPESGLTTKKEIQGKPE 9200
Query: 260 LRTTRKRKMILXXXXXXXXXXXXSVQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPS 439
+ +K+ ++ D T E EPA E VQ+E + + S
Sbjct: 9201 KKIMKKKT---EKADSSISETSETLTKDLTQTKQSEPEPAKRTTETSVQDEVKRKTETTS 9257
Query: 440 CSTSSKD 460
S + +
Sbjct: 9258 KSKQTTE 9264
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 347 PPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDND 466
P A +E+ A+P P Q + +N+KP CS++ K +
Sbjct: 1063 PKLAENEKNAASP-PTRHQQNGSKDKNEKPGCSSTKKQQN 1101
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 347 PPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDND 466
P A +E+ A+P P Q + +N+KP CS++ K +
Sbjct: 1063 PKLAENEKNAASP-PTRHQQNGSKDKNEKPGCSSTKKQQN 1101
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 353 TASDEREPATPEPEDPVQEEAAAENDK--PSCSTSSKDN 463
T E EPA P DPV+E ++ ++ + ST S DN
Sbjct: 3066 TEEPEAEPALVLPTDPVEENDVSDEEEEISTISTVSPDN 3104
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 353 TASDEREPATPEPEDPVQEEAAAENDK--PSCSTSSKDN 463
T E EPA P DPV+E ++ ++ + ST S DN
Sbjct: 3066 TEEPEAEPALVLPTDPVEENDVSDEEEEISTISTVSPDN 3104
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 350 PTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSK 457
PT S +REP +P+P+ P+ + D+P C S+
Sbjct: 67 PTFSLQREPTSPKPKRPLNITSDPPADEP-CPDESR 101
>Z81072-5|CAB03020.1| 591|Caenorhabditis elegans Hypothetical
protein F30A10.6 protein.
Length = 591
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 480 MIMIPFKRMMMILIGLNMEITTACLRFLMIMIVSLKFIFLNG 605
+I F M IL L + TA + +++I V + FIFLNG
Sbjct: 538 LIAALFAMSMTILCLLVADNFTATIFWMVIFFVCMMFIFLNG 579
>U41274-7|AAA82463.1| 1610|Caenorhabditis elegans Hypothetical
protein T04G9.1 protein.
Length = 1610
Score = 27.9 bits (59), Expect = 6.6
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 2/97 (2%)
Frame = +2
Query: 149 VQETGDLNGAKAGPDTDREAGESSGVLIQLEEEAQDDLRTTRKRKMILXXXXXXXXXXXX 328
VQ L GA++ PDT ++ ++ EE A + R R+RK IL
Sbjct: 451 VQSLNKLTGARSTPDTPKQ--------LKPEEPASETPR-KRQRKQILVSDHHYQSSHLY 501
Query: 329 SVQNDEP--PTASDEREPATPEPEDPVQEEAAAENDK 433
S+ D+P E+E + A+ EN K
Sbjct: 502 SLLQDDPVKHEPPSEKEEEQSRSSSNIVHSASQENTK 538
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 338 NDEPPTASDEREPATPEPEDP 400
ND PP+ R+PA P+P+ P
Sbjct: 321 NDVPPSPPPYRKPAPPQPQAP 341
>AF132883-1|AAD25092.1| 925|Caenorhabditis elegans UNC-52/Perlecan
protein.
Length = 925
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 353 TASDEREPATPEPEDPVQEEAAAENDK--PSCSTSSKDN 463
T E EPA P DPV+E ++ ++ + ST S DN
Sbjct: 616 TEEPEAEPALVLPTDPVEENDVSDEEEEISTISTVSPDN 654
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -1
Query: 225 TPEDSPASRSVSGPA--LAPFRSP 160
+P SPAS S SGPA + P R P
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPP 324
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 186 PALAPFRSPVSWTTSSLATSLDSMLISVDSAIEKLP 79
P +AP R+PV +S A LD + + +K P
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAP 365
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -1
Query: 225 TPEDSPASRSVSGPA--LAPFRSP 160
+P SPAS S SGPA + P R P
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPP 324
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 186 PALAPFRSPVSWTTSSLATSLDSMLISVDSAIEKLP 79
P +AP R+PV +S A LD + + +K P
Sbjct: 330 PPVAPRRNPVVSPKNSTAGLLDGLELGSAEPAKKAP 365
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 332 VQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDNDST 472
V++DE SDE E EP D +E+ E ++ +D+D +
Sbjct: 375 VEDDEEDAGSDEAE---EEPSDEEEEDEETEEEEEEEEEEEEDDDES 418
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 332 VQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDNDST 472
V++DE SDE E EP D +E+ E ++ +D+D +
Sbjct: 363 VEDDEEDAGSDEAE---EEPSDEEEEDEETEEEEEEEEEEEEDDDES 406
>Z81124-12|CAI46579.2| 489|Caenorhabditis elegans Hypothetical
protein T21B4.17 protein.
Length = 489
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 335 QNDEPPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDNDS 469
+ D+ +++REP EP P + EN++P CSTS +S
Sbjct: 310 KKDKKSKQTEQREP-NEEPRSP-----SIENNQPHCSTSDPSAES 348
>Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical
protein R11D1.7 protein.
Length = 461
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 329 SVQNDEPPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSS 454
S++ D P T S R TP P P EAA ND+ + ++SS
Sbjct: 366 SIRGDTPRTDS-ARSHNTPTPRSPKNPEAA--NDQTNVTSSS 404
>Z71266-3|CAA95840.1| 292|Caenorhabditis elegans Hypothetical
protein R06C7.4 protein.
Length = 292
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 86 FSIAESTLISMESSEVAKEEVVQE-TGDLNGAKAGPDTDREAGESSG 223
FS S IS ESS A E E +G+ +G +G + +GESSG
Sbjct: 36 FSGDSSGEISGESSGEASGEASGEASGEASGEASGESSGETSGESSG 82
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 347 PPTASDEREPATPEPEDPVQEEAAAENDKPSCSTSSKDNDST 472
P ++ + E PEPE+ +E + + + S S +KD ST
Sbjct: 81 PRKSARKSELKKPEPEEKAKEPRKSASKRKSSSLMNKDEPST 122
>DQ340625-1|ABC65813.1| 292|Caenorhabditis elegans chondroitin
proteoglycan-3 protein.
Length = 292
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 86 FSIAESTLISMESSEVAKEEVVQE-TGDLNGAKAGPDTDREAGESSG 223
FS S IS ESS A E E +G+ +G +G + +GESSG
Sbjct: 36 FSGDSSGEISGESSGEASGEASGEASGEASGEASGESSGETSGESSG 82
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 433 LIIFSRCFLLNRILGFRCRRFALVGGGRRFVVLHRLLSFFNXCAIF-VQYHFTFSGSSEV 257
L I + C LL +LGF + G + L+ CA+F + F + ++
Sbjct: 131 LKITTNCILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVSAQRNKY 190
Query: 256 ILC 248
ILC
Sbjct: 191 ILC 193
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -3
Query: 433 LIIFSRCFLLNRILGFRCRRFALVGGGRRFVVLHRLLSFFNXCAIF-VQYHFTFSGSSEV 257
L I + C LL +LGF + G + L+ CA+F + F + ++
Sbjct: 131 LKITTNCILLVFVLGFLALKSGFFGKNANIMAYVLLIVILPICALFQILIQFVSAQRNKY 190
Query: 256 ILC 248
ILC
Sbjct: 191 ILC 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,284,541
Number of Sequences: 27780
Number of extensions: 236816
Number of successful extensions: 1410
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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