Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P02_F_L06
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.48 
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          25   0.63 
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          24   1.1  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          24   1.1  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          24   1.1  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          24   1.1  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          24   1.1  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          24   1.1  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    24   1.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   1.5  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   3.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 21/82 (25%), Positives = 34/82 (41%)
 Frame = +3

Query: 258 TSELPENVK*Y*TKMAXLLKKERSLCKTTNLRPPPTSANRRHLNPRILFKRKQRLKMISR 437
           TSE  EN   Y    A   KK+RSL     L       N      R +F   QR +  + 
Sbjct: 75  TSENEENYPHYQMSGAKQKKKKRSLMGAQGLSIRGLQINHEDETIRPVFSTLQRAEYPTN 134

Query: 438 LALHLQKTMIQQSRMIMIPFKR 503
            +L +++   +  R +++  K+
Sbjct: 135 RSLFIREQTEEMYREMLLEHKK 156


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRGIINPEDVMLKRRTGEGSKP 169


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +2

Query: 344 EPPTASDEREPATPEPEDPVQEEAAAENDKP 436
           +P T SDE +     PED + +    E  KP
Sbjct: 139 KPTTTSDELKRDIINPEDVMLKRRTGEGSKP 169


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/44 (22%), Positives = 16/44 (36%)
 Frame = -2

Query: 593 NKFQADDHNHQKSQTCRRDLHIQPNQNHHHPLERNHYHPRLLNH 462
           N +     +H         +H  P+ +H H    +H H   L H
Sbjct: 407 NVYSTPGPHHHTMGHGHSHIHATPHHHHSHAATPHHQHSTPLAH 450


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 209 LPRGRCLGPP 180
           +PR RC+GPP
Sbjct: 145 VPRFRCIGPP 154


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 527 QPNQNHHHPLERNHYH 480
           QP+Q+H+    +N++H
Sbjct: 52  QPHQDHNKEKSKNNHH 67


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 518 QNHHHPLERNHYH 480
           Q HHH L+ +H+H
Sbjct: 139 QRHHH-LQNHHHH 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,039
Number of Sequences: 438
Number of extensions: 3037
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)